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International Activity Support for Dynamical ordering of biomolecular systems for creation of integrated functions

International Activities Supporting Group

Project AreaDynamical ordering of biomolecular systems for creation of integrated functions
Project/Area Number 15K21708
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeMulti-year Fund
Review Section Science and Engineering
Research InstitutionCenter for Novel Science Initatives, National Institutes of Natural Sciences (2018)
Okazaki Research Facilities, National Institutes of Natural Sciences (2015-2017)

Principal Investigator

Kato Koichi  大学共同利用機関法人自然科学研究機構(新分野創成センター、アストロバイオロジーセンター、生命創成探究, 生命創成探究センター, 教授 (20211849)

Co-Investigator(Kenkyū-buntansha) 佐藤 啓文  京都大学, 工学研究科, 教授 (70290905)
平岡 秀一  東京大学, 大学院総合文化研究科, 教授 (10322538)
上久保 裕生  奈良先端科学技術大学院大学, 先端科学技術研究科, 教授 (20311128)
寺嶋 正秀  京都大学, 理学研究科, 教授 (00188674)
芳坂 貴弘  北陸先端科学技術大学院大学, 先端科学技術研究科, 教授 (30263619)
佐藤 宗太  東京大学, 大学院理学系研究科(理学部), 特任准教授 (40401129)
岡本 祐幸  名古屋大学, 理学研究科, 教授 (70185487)
稲垣 直之  奈良先端科学技術大学院大学, 先端科学技術研究科, 教授 (20223216)
Project Period (FY) 2015-11-06 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥42,640,000 (Direct Cost: ¥32,800,000、Indirect Cost: ¥9,840,000)
Fiscal Year 2017: ¥14,300,000 (Direct Cost: ¥11,000,000、Indirect Cost: ¥3,300,000)
Fiscal Year 2016: ¥14,170,000 (Direct Cost: ¥10,900,000、Indirect Cost: ¥3,270,000)
Fiscal Year 2015: ¥14,170,000 (Direct Cost: ¥10,900,000、Indirect Cost: ¥3,270,000)
Keywords動的秩序 / 生命分子 / 超分子 / 集合離散 / 高次機能 / 離合集散
Outline of Final Research Achievements

To accomplish the project on dynamical ordering of biomolecular systems for creation of integrated functions, we performed the following activities: International symposiums were frequently organized for promoting academic exchange with internal, external, and overseas researchers for the planning and coordination of research integration and discussion of future direction of the project. We promoted bilateral joint researches, international collaborations, and various events for fostering young researchers. Especially, we extensively encouraged cross-disciplinary international collaborations by sending young members abroad and by inviting or employing foreign researchers.

Academic Significance and Societal Importance of the Research Achievements

本領域が主体となって創出した秩序化分子ネットワークは、生命分子科学を基軸に、生物物理学、理論・計算科学、合成化学、構造・システム生物学、さらには医学・薬学・工学・環境科学等を横断し、本領域外の研究者も交えた超域的なコミュニティを生み出した。その勢いは海外にも波及し、本領域が中心となって立ち上げたFrontier Bioorganization Forumは、アジアの研究者とともに、領域活動が終了した後も、さらなる発展を遂げつつある。また、領域の若手の国際的プレゼンスが高まり、異分野融合交流を通じて培った広い視野と人的ネットワークを基盤に、次世代を担う若手の間の異分野融合研究も既に始動している。

Report

(5 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Research-status Report
  • 2016 Research-status Report
  • 2015 Research-status Report
  • Research Products

    (95 results)

All 2019 2018 2017 2016 2015 Other

All Int'l Joint Research (24 results) Journal Article (27 results) (of which Int'l Joint Research: 13 results,  Peer Reviewed: 27 results,  Open Access: 12 results,  Acknowledgement Compliant: 6 results) Presentation (38 results) (of which Int'l Joint Research: 37 results,  Invited: 26 results) Remarks (2 results) Funded Workshop (4 results)

  • [Int'l Joint Research] National Institutes of Health/The Scripps Research/University of California(米国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Max Planck Institute/Free University of Berlin(ドイツ)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] National Chiao Tung University/Academia Sinica(その他の国・地域)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] Yonsei University/Korea Institute For Advanced Study/Ewha Womans University(韓国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] University of Cambridge/University of Edinburgh(英国)

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2018 Annual Research Report
  • [Int'l Joint Research] National Institutes of Health/The Scripps Research/University of California(米国)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] Max Planck Institute/Free University of Berlin(ドイツ)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] National Chiao Tung University/Academia Sinica(台湾)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] Chimie Paris Teck(フランス)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] University of Cambridge/University of Edinburgh(英国)

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research]

    • Related Report
      2017 Research-status Report
  • [Int'l Joint Research] National Institute of Health/The Scripps Research/University of Miami(米国)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] Max Planck Institute/Free University of Berlin(ドイツ)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] 南京理工大学(中国)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] Centre de Biochimie Structurale/University Paul sabatier Group(フランス)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] University of Leeds/University of Cambridge/The Francis Crick Institute(英国)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research]

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] National Institutes of Health/The Scripps Research/University of Miami(米国)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] Max Planck Institute/Free University of Berlin(ドイツ)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] 南京理工大学(中国)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] Centre de Biochimie Structurale/Universite Paul Sabatier Groupe(フランス)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] University of Leeds/University of Cambridge/The Francis Crick Institute(英国)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research]

    • Related Report
      2015 Research-status Report
  • [Journal Article] Determination of the Structural Ensemble of the Molten Globule State of a Protein by Computer Simulations2019

    • Author(s)
      Shimizu Masahiro、Kajikawa Yukihito、Kuwajima Kunihiro、Dobson Christopher M.、Okamoto Yuko
    • Journal Title

      Proteins: Structure, Function, and Bioinformatics

      Volume: in press Issue: 8 Pages: 635-645

    • DOI

      10.1002/prot.25688

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Self-assembly Processes of Octahedron-shaped Pd6L4 Cages2019

    • Author(s)
      S. Komine, S. Takahashi, T. Kojima, H. Sato, and S. Hiraoka
    • Journal Title

      Journal of American Chemical Society

      Volume: 141 Issue: 7 Pages: 3178-3186

    • DOI

      10.1021/jacs.8b12890

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Self-assembly process of a quadruply interlocked palladium cage2019

    • Author(s)
      Tateishi Tomoki、Yasutake Yuichi、Kojima Tatsuo、Takahashi Satoshi、Hiraoka Shuichi
    • Journal Title

      Communications Chemistry

      Volume: 2 Issue: 1 Pages: 25-25

    • DOI

      10.1038/s42004-019-0123-6

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Temperature-controlled repeatable scrambling and induced-sorting of building blocks between cubic assemblies2019

    • Author(s)
      Zhan, Y.-Y.; Kojima, T.; Ishii, K.; Takahashi, S.; Haketa, Y.; Maeda, H.; Uchiyama, S.; Hiraoka, S.
    • Journal Title

      Nature Communications

      Volume: 10 Issue: 1 Pages: 1440-1440

    • DOI

      10.1038/s41467-019-09495-1

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Self-assembly processes of octahedron-shaped Pd6L12 cages2019

    • Author(s)
      Komine Shohei、Tateishi Tomoki、Kojima Tatsuo、Nakagawa Haruna、Hayashi Yasuhiro、Takahashi Satoshi、Hiraoka Shuichi
    • Journal Title

      Dalton Transactions

      Volume: 48 Issue: 13 Pages: 4139-4148

    • DOI

      10.1039/c8dt04931a

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Stochastic Model Study on the Self-Assembly Process of a Pd2L4 Cage Consisting of Rigid Ditopic Ligands2019

    • Author(s)
      S. Takahashi, Y. Sasaki, S. Hiraoka, and H. Sato
    • Journal Title

      Physical Chemistry Chemical Physics

      Volume: 21 Issue: 12 Pages: 6341-6347

    • DOI

      10.1039/c8cp06102e

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A Kinetics Study of Ligand Substitution Reaction on Dinuclear Platinum Complexes: Stochastic Versus Deterministic Approach2019

    • Author(s)
      T. Iioka, S. Takahashi, Y. Yoshida, Y. Matsumura, S. Hiraoka, and H. Sato
    • Journal Title

      Journal of Computational Chemistry

      Volume: 40 Issue: 1 Pages: 281-287

    • DOI

      10.1002/jcc.25588

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Self-assembly Processes of Pd(II)- and Pt(II)-linked Discrete Self-assemblies Revealed by QASAP2018

    • Author(s)
      Hiraoka Shuichi
    • Journal Title

      Israel Journal of Chemistry

      Volume: - Issue: 3-4 Pages: 151-165

    • DOI

      10.1002/ijch.201800073

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Theoretical and Experimental Studies on Inclusion Complexes of Pinostrobin and β-Cyclodextrins2018

    • Author(s)
      Kicuntod Jintawee、Sangpheak Kanyani、Mueller Monika、Wolschann Peter、Viernstein Helmut、Yanaka Saeko、Kato Koichi、Chavasiri Warinthorn、Pongsawasdi Piamsook、Kungwan Nawee、Rungrotmongkol Thanyada
    • Journal Title

      Sci. Pharm.

      Volume: 86 Issue: 1 Pages: 5-5

    • DOI

      10.3390/scipharm86010005

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Site-specific N-glycosylation analysis of soluble Fcγ receptor IIIb in human serum2018

    • Author(s)
      Yagi Hirokazu、Takakura Daisuke、Roumenina Lubka T.、Fridman Wolf Herman、Sautes-Fridman Catherine、Kawasaki Nana、Kato Koichi
    • Journal Title

      Sci. Rep.

      Volume: 8 Issue: 1 Pages: 2719-2719

    • DOI

      10.1038/s41598-018-21145-y

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Solution NMR views of dynamical ordering of biomacromolecules2018

    • Author(s)
      Ikeya Teppei、Ban David、Lee Donghan、Ito Yutaka、Kato Koichi、Griesinger Christian
    • Journal Title

      Biochim. Biophys. Acta-General Subjects

      Volume: 1862 Issue: 2 Pages: 287-306

    • DOI

      10.1016/j.bbagen.2017.08.020

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Photoreaction Dynamics of LOV1 and LOV2 of Phototropin from Chlamydomonas reinhardtii2018

    • Author(s)
      Nakasone Yusuke、Ohshima Masumi、Okajima Koji、Tokutomi Satoru、Terazima Masahide
    • Journal Title

      J.Phys.Chem.B

      Volume: 122 Issue: 6 Pages: 1801-1815

    • DOI

      10.1021/acs.jpcb.7b10266

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Sequential DNA Binding and Dimerization Processes of the Photosensory Protein EL2222018

    • Author(s)
      Takakado Akira、Nakasone Yusuke、Terazima Masahide
    • Journal Title

      Biochemistry

      Volume: 57 Issue: 10 Pages: 1603-1610

    • DOI

      10.1021/acs.biochem.7b01206

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Photoreaction of BlrP1: the role of a nonlinear photo-intensity sensor2018

    • Author(s)
      Shibata Kosei、Nakasone Yusuke、Terazima Masahide
    • Journal Title

      Phys.Chem.Chem.Phys.

      Volume: 20 Issue: 12 Pages: 8133-8142

    • DOI

      10.1039/c7cp08436f

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Novel physical chemistry approaches in biophysical researches with advanced application of lasers: Detection and manipulation2018

    • Author(s)
      Iwata Koichi、Terazima Masahide、Masuhara Hiroshi
    • Journal Title

      BBA

      Volume: 1862 Issue: 2 Pages: 335-357

    • DOI

      10.1016/j.bbagen.2017.11.003

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Applications of high-speed atomic force microscopy to real-time visualization of dynamic biomolecular processes2018

    • Author(s)
      Takayuki Uchihashi, Simon Scheuring
    • Journal Title

      Biochimica et Biophysica Acta(BBA)

      Volume: 1862 Pages: 229-240

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Solution NMR views of dynamical ordering of biomacromolecules2018

    • Author(s)
      Teppei Ikeya, David Ban, Donghan Lee, Yutaka Ito, Christian Griesinger
    • Journal Title

      Biochimica et Biophysica Acta(BBA)

      Volume: 1862 Pages: 287-306

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Dynamic membrane interactions of antibacterial and antifungal biomolecules, and amyloid peptides, revealed by solid-state NMR spectroscopy2018

    • Author(s)
      Akira Naito, Nobuaki Matsumori, Ayyalusamy Ramamoorthy
    • Journal Title

      Biochimica et Biophysica Acta(BBA)

      Volume: 1862 Pages: 307-323

    • Related Report
      2017 Research-status Report
    • Peer Reviewed
  • [Journal Article] Cryo-electron microscopy for structural analysis of dynamic biological macromolecules2018

    • Author(s)
      Kazuyoshi Murata, Matthias Wolf
    • Journal Title

      Biochimica et Biophysica Acta(BBA)

      Volume: 1862 Pages: 324-334

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] O-GlcNAc on NOTCH1 EGF repeats regulates ligand-induced Notch signaling and vascular development in mammals2017

    • Author(s)
      *Shogo Sawaguchi, *Shweta Varshney, *Mitsutaka Ogawa, Yuta Sakaidani, Hirokazu Yagi, Kyosuke Takeshita, Toyoaki Murohara, Koichi Kato, Subha Sundaram , Pamela Stanley and Tetsuya Okajima. (*equal contribution)
    • Journal Title

      eLife

      Volume: 6

    • DOI

      10.7554/elife.24419

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Formation of the chaperonin complex studied by 2D NMR spectroscopy2017

    • Author(s)
      Takenaka Toshio、Nakamura Takashi、Yanaka Saeko、Yagi-Utsumi Maho、Chandak Mahesh S.、Takahashi Kazunobu、Paul Subhankar、Makabe Koki、Arai Munehito、Kato Koichi、Kuwajima Kunihiro
    • Journal Title

      PLOS ONE

      Volume: 12 Issue: 10 Pages: 187022-187022

    • DOI

      10.1371/journal.pone.0187022

    • Related Report
      2017 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] New insight into the dynamical system of αB-crystallin oligomers2016

    • Author(s)
      R. Inoue, T. Takata, N. Fujii, K. Ishii, S. Uchiyama, N. Sato, Y. Oba, K. Wood, K. Kato, N. Fujii, and M. Sugiyama
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 29208-29208

    • DOI

      10.1038/srep29208

    • NAID

      120006323745

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Comparison of analytical methods for profiling N- and O-linked glycans from cultured cell lines : HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study2016

    • Author(s)
      Hiromi Ito et al.
    • Journal Title

      Glycoconjugate J.

      Volume: 未定 Issue: 3 Pages: 405-415

    • DOI

      10.1007/s10719-015-9625-3

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Direct mapping of additional modifications on phosphorylated O-glycans of α-dystroglycan by mass spectrometry analysis in conjunction with knocking out of causative genes for dystroglycanopathy2016

    • Author(s)
      H.Yagi, C.-W.Kuo, T.Obayashi, S.Ninagawa, K.-H.Khoo, and K.Kato
    • Journal Title

      Mol. Cell Proteomics

      Volume: 15 Issue: 11 Pages: 3424-3434

    • DOI

      10.1074/mcp.m116.062729

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Potential energy landscapes of tetragonal pyramid molecules2016

    • Author(s)
      Yuichiro Yoshida, Hirofumi Sato, John W.R. Morgan, and David J. Wales
    • Journal Title

      Chemical Physics Letters

      Volume: 664 Pages: 5-9

    • DOI

      10.1016/j.cplett.2016.09.058

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Mass Spectrometric Characterization of HIV-1 Reverse Transcriptase Interactions with Non-nucleoside Reverse Transcriptase Inhibitors2016

    • Author(s)
      Thammaporn R, Ishii K, Yagi-Utsumi M, Uchiyama S, Hannongbua S, Kato K.
    • Journal Title

      Biological and Pharmaceutical Bulletin

      Volume: 39 Issue: 3 Pages: 450-454

    • DOI

      10.1248/bpb.b15-00880

    • NAID

      130005132309

    • ISSN
      0918-6158, 1347-5215
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Equilibrium molecular thermodynamics from Kirkwood sampling2015

    • Author(s)
      S. Somani, Y. Okamoto, A.J. Ballard, and D.J. Wales
    • Journal Title

      J. Phys. Chem. B,

      Volume: 119 Issue: 20 Pages: 6155-6169

    • DOI

      10.1021/acs.jpcb.5b01800

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] Mechanistic insights on the dynamics of proteasome formation2019

    • Author(s)
      Koichi Kato and Tadashi Sato
    • Organizer
      2019 EWU-NCU joint symposium
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] What is life? What is ExCELLS?2018

    • Author(s)
      Koichi Kato
    • Organizer
      Frontier Bioorganization Forum 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] NMR characterization of conformational dynamics and molecular assemblies of proteins2018

    • Author(s)
      Maho Yagi-Utsumi, Koichi Kato
    • Organizer
      ExCELLS Young Scientists Forum 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] KaiC ATP hydrolysis regulates KaiA-KaiC interaction through the conformational changes in its C-terminal segments in the cyanobacterial circadian clock system2018

    • Author(s)
      Yasuhiro Yunoki, Hirokazu Yagi, Maho Yagi-Utsumi, Kentaro Ishii, Reiko Murakami, Susumu Uchiyama, Koichi Kato
    • Organizer
      ExCELLS Young Scientists Forum 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] FUT9-dependent Lewis X modification is mediated through the specific amino acid sequence of LAMP-12018

    • Author(s)
      Taiki Saito, Hirokazu Yagi, Shingo Tsuge, Chu-Wei Kuo, Kay-Hooi Khoo, Koichi Kato
    • Organizer
      ExCELLS Young Scientists Forum 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of high binding affinity oligosaccharide for lectin by reshaping of its conformational space2018

    • Author(s)
      Tatsuya Suzuki, Saeko Yanaka,Tokio Watanabe, Gengwei Yan,Tadashi Satoh, Hirokazu Yagi, Takumi Yamaguchi, Koichi Kato
    • Organizer
      ExCELLS Young Scientists Forum 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Characterization of interaction between IgG-Fc and Fc receptor glycoproteins using nuclear magnetic resonance and small-angle neutron scattering2018

    • Author(s)
      Rina Yogo, Saeko Yanaka, Hirokazu Yagi, Rintaro Inoue, Masaaki Sugiyama, Koichi Kato
    • Organizer
      ExCELLS Young Scientists Forum 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Native mass spectrometry: mass spectrometry for molecular complex assembled by weak interaction2018

    • Author(s)
      Kentaro Ishii, Koichi Kato, Susumu Uchiyama
    • Organizer
      ExCELLS Young Scientists Forum 2018
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Application of coordination chemistry approach to structuralanalysis of carbohydrate chains of biological interest2018

    • Author(s)
      加藤晃一,山口拓実
    • Organizer
      43rd International Conference on Coordination Chemistry(ICCC2018)
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] An integrative structural study of antibody2018

    • Author(s)
      Koichi Kato
    • Organizer
      The 6th International Symposium on Drug Discovery and Design by NMR
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] In situ structural characterization of antibody interactions2018

    • Author(s)
      Koichi Kato
    • Organizer
      KIAS Conference on Protein Structure and Function
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Development of high-affinity glycan for lectin by reshaping of its structural dynamics2018

    • Author(s)
      Tatsuya Suzuki, Saeko Yanaka, Tokio Watanabe, Gengwei Yan, Tadashi Satoh, Hirokazu Yagi, Takumi Yamaguchi, Koichi Kato
    • Organizer
      2018 Japan&Korea Joint Seminars on Biomolecular Sciences
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Characterization of dynamics and functions of antibodies2018

    • Author(s)
      Rina Yogo, Saeko Yanaka, Hirokazu Yagi, Rintaro Inoue, Masaaki Sugiyama, Koichi Kato
    • Organizer
      2018 Japan&Korea Joint Seminars on Biomolecular Sciences
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] NMR analysis of conformational dynamics of linear Lys48-linked ubiquitin chains2018

    • Author(s)
      Methanee Hiranyakorn, Saeko Yanaka, Maho Yagi-Utsumi, Koichi Kato
    • Organizer
      2018 Japan&Korea Joint Seminars on Biomolecular Sciences
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] NMR analyses of conformational dynamics and molecular assemblies of amyloid-β2018

    • Author(s)
      Maho Yagi-Utsumi, Koichi Kato
    • Organizer
      2018 Japan&Korea Joint Seminars on Biomolecular Sciences
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Reaction Dynamics of Photo-induced Protein-DNA Interaction2018

    • Author(s)
      M.Terazima
    • Organizer
      Trombay Symposium on Radiation & Photochemistry
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Conformational analysis of high mannose-type oligosaccharides by self-guided langevin dynamics simulation2017

    • Author(s)
      Yoshitake Sakae, Takumi Yamaguchi, Xiongwu Wu, Bernard R. Brooks, Koichi Kato, and Yuko Okamoto
    • Organizer
      The 5th International Symposium on Dynamical Ordering of Biomolecular Systems
    • Place of Presentation
      東京大学駒場キャンパス(東京都目黒区)
    • Year and Date
      2017-01-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Direct observation of conformational dynamics of photosynthetic complexes on grana thylakoid membranes by high-speed atomic force microscopy2017

    • Author(s)
      Shingo Fukuda, Bibiana onoa, Carlos Bustamante
    • Organizer
      The 5th International Symposium on Dynamical Ordering of Biomolecular Systems
    • Place of Presentation
      東京大学駒場キャンパス(東京都目黒区)
    • Year and Date
      2017-01-21
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] Structural insights into dynamic orchestration of biomolecular systems2017

    • Author(s)
      Koichi Kato
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Versatile structural architectures of archaeal homolog of proteasome assembly chaperone2017

    • Author(s)
      Maho Yagi-Utsumi, Arunima Sikdar, Tadashi Satoh and Koichi Kato
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Native mass spectrometry: complementary to other biophysical methods2017

    • Author(s)
      Susumu Uchiyama
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Biomolecular simulations in generalized ensemble2017

    • Author(s)
      Yuko Okamoto
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Theoretical study on substituent and solvent effects for nanocube formed with gear-shaped amphiphile molecules2017

    • Author(s)
      Masanori Tachikawa
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular Mechanism for Axon Navigation in the Brain2017

    • Author(s)
      Naoyuki Inagaki
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Strain-sensitive regulation of mechanical activities of dyneins underlying oscillatory movement of sperm flagella2017

    • Author(s)
      Chikako Shingyoji
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Multi-component equilibrium in biological systems explored by using continuous titration SAXS2017

    • Author(s)
      Hironari Kamikubo
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Design of Protein Assemblies as Supramolecular Platforms2017

    • Author(s)
      Takafumi Ueno
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Investigation on domain motion of protein by neutron scattering2017

    • Author(s)
      Masaaki Sugiyama
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Nanocube: Ultra-Thermostble Self-Assemblies in Water2017

    • Author(s)
      Shuichi Hiraoka
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Control over differentiation of a metastable supramolecular assembly2017

    • Author(s)
      Kazunori Sugiyasu
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Chemo-mechanical coupling mechanisms of linear and rotary molecular motors revealed by high-speed single-molecule imaging analysis2017

    • Author(s)
      Ryota Iino
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Direct visualization of dynamic molecular interactions using HS-AFM2017

    • Author(s)
      Takayuki Uchihashi
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Viscosity, thermal diffusivity, and polarity of lipid bilayer membranes estimated from fast time-resolved spectroscopic measurements2017

    • Author(s)
      Koichi Iwata
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Understanding of Self-Assembly Process at Molecular Level2017

    • Author(s)
      Hirofumi Sato
    • Organizer
      Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Structural views of fate determination of glycoproteins in cells2017

    • Author(s)
      Koichi Kato
    • Organizer
      Seminar at Max Planck Institute for Biophysical Chemistry
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Light induced heating and volume changes to reveal protein reactions2017

    • Author(s)
      M.Terazima
    • Organizer
      9th International Conference on Photoacoustic and Photothermal Phenomena
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Time-resolved diffusion technique can detect conformation dynamics of photosensor proteins2017

    • Author(s)
      M.Terazima
    • Organizer
      Asia Oceania Conference on Photobiology
    • Related Report
      2017 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 糖鎖の生命分子構造学2016

    • Author(s)
      加藤晃一
    • Organizer
      第371回CBI学会講演会
    • Place of Presentation
      グランフロント大阪ナレッジキャピタル(大阪市北区)
    • Year and Date
      2016-04-23
    • Related Report
      2016 Research-status Report
    • Invited
  • [Remarks] 生命分子システムにおける動的秩序形成と高次機能発現

    • URL

      http://seimei.ims.ac.jp/

    • Related Report
      2018 Annual Research Report
  • [Remarks] Dynamical ordering of biomolecular systems~

    • URL

      http://seimei.ims.ac.jp/index_e.html

    • Related Report
      2017 Research-status Report
  • [Funded Workshop] Frontier Bioorganization Forum 2018: Dynamical ordering and integrated functions of biomolecular systems2019

    • Related Report
      2018 Annual Research Report
  • [Funded Workshop] The 6th International Symposium of Dynamical Ordering of Biomolecular Systems2018

    • Related Report
      2017 Research-status Report
  • [Funded Workshop] Frontier Bioorganization Forum 2017: Dynamical ordering and integrated functions of biomolecular systems2017

    • Related Report
      2017 Research-status Report
  • [Funded Workshop] Germany-Japan Young Scientist meeting on “Dynamic ordering of biomolecular systems for creation of integrated function”2017

    • Related Report
      2017 Research-status Report

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Published: 2015-11-10   Modified: 2022-10-18  

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