• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Information physics of living matters

Administrative Group

Project AreaInformation physics of living matters
Project/Area Number 19H05794
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Complex systems
Research InstitutionThe University of Tokyo

Principal Investigator

岡田 康志  東京大学, 大学院医学系研究科(医学部), 教授 (50272430)

Co-Investigator(Kenkyū-buntansha) 佐々 真一  京都大学, 理学研究科, 教授 (30235238)
石島 秋彦  大阪大学, 大学院生命機能研究科, 教授 (80301216)
沙川 貴大  東京大学, 大学院工学系研究科(工学部), 教授 (60610805)
伊藤 創祐  東京大学, 大学院理学系研究科(理学部), 講師 (00771221)
小林 徹也  東京大学, 生産技術研究所, 准教授 (90513359)
澤井 哲  東京大学, 大学院総合文化研究科, 教授 (20500367)
竹内 一将  東京大学, 大学院理学系研究科(理学部), 准教授 (50622304)
川口 喬吾  国立研究開発法人理化学研究所, 開拓研究本部, 理研白眉研究チームリーダー (00787319)
青木 一洋  大学共同利用機関法人自然科学研究機構(機構直轄研究施設), 生命創成探究センター, 教授 (80511427)
松岡 里実  大阪大学, 大学院生命機能研究科, 助教 (00569733)
神原 丈敏  国立研究開発法人理化学研究所, 生命機能科学研究センター, 上級研究員 (40451637)
福岡 創  大阪大学, 大学院生命機能研究科, 准教授 (50447190)
榎 佐和子 (苙口佐和子)  東京大学, 大学院理学系研究科(理学部), 特任助教 (50467635)
池崎 圭吾  東京大学, 大学院理学系研究科(理学部), 助教 (10722960)
蔡 栄淑  大阪大学, 大学院生命機能研究科, 助教 (40378716)
森下 喜弘  国立研究開発法人理化学研究所, 生命機能科学研究センター, チームリーダー (00404062)
岩城 光宏  国立研究開発法人理化学研究所, 生命機能科学研究センター, 客員研究員 (30432503)
猪股 秀彦  国立研究開発法人理化学研究所, 生命機能科学研究センター, チームリーダー (60372166)
中島 昭彦  東京大学, 大学院総合文化研究科, 助教 (90612119)
Project Period (FY) 2019-06-28 – 2024-03-31
Project Status Granted (Fiscal Year 2023)
Budget Amount *help
¥218,530,000 (Direct Cost: ¥168,100,000、Indirect Cost: ¥50,430,000)
Fiscal Year 2023: ¥47,840,000 (Direct Cost: ¥36,800,000、Indirect Cost: ¥11,040,000)
Fiscal Year 2022: ¥39,390,000 (Direct Cost: ¥30,300,000、Indirect Cost: ¥9,090,000)
Fiscal Year 2021: ¥43,160,000 (Direct Cost: ¥33,200,000、Indirect Cost: ¥9,960,000)
Fiscal Year 2020: ¥29,510,000 (Direct Cost: ¥22,700,000、Indirect Cost: ¥6,810,000)
Fiscal Year 2019: ¥58,630,000 (Direct Cost: ¥45,100,000、Indirect Cost: ¥13,530,000)
Keywords情報物理学 / 生物物理学 / 非平衡統計力学 / 情報熱力学
Outline of Research at the Start

本領域は、生命現象を分子レベルから定量的に計測する技術の発展と、非平衡系の統計力学・情報熱力学理論の深化を背景とした、両者の融合領域である。生命現象の理解という具体的な課題に対して「情報を力、エネルギーと同列に物理的対象として議論する新しい物理学」を構築することで、生物学と物理学の間の新たな学際領域を開拓する。この目的を達成するために、本総括班は、領域内での生物系の実験研究と物理系の理論研究の学際融合研究を推進する

Outline of Annual Research Achievements

本領域は、生命現象を題材として、情報を力、エネルギーなどと同列に物理的対象として議論する新しい物理学を構築することが目標である。その理論的支柱である情報の物理学の深化発展と、実験対象たる生命現象における情報の計測を車の両輪として推進する。従って、基本的な戦略は、「情報の物理学」理論研究と「生命現象における情報」の実験・計測の融合である。そのため、異分野融合推進のための施策が総括班の活動の中心となる。
2022年度には、コロナ禍による対面での交流イベント開催への制限も緩和され、6月には第5回領域会議を淡路夢舞台国際会議場で開催することができた。公募班も含めた領域全メンバーが集結する最初の領域会議とであり、計画班を中心とした口頭発表と全参加ラボからのポスター発表を行い、対面ならではの研究交流で大いに盛り上がることとなった。引き続き、23年3月には、第6回領域会議をアクロス福岡で開催した。領域研究賞および領域奨励賞による表彰も継続した。
対面でのイベント復活により、領域計画当初から企画していた実験勉強会、理論勉強会を10月に東京大学で開催することができた。
また、異分野融合促進の中核的な事業として、理論研究者が実験現場に入り、実験研究者が理論研究室を訪れるという人材交流を推奨し、領域としてサポートしてきた。2022年度にも、共同研究のサポートを継続するとともに、共同研究の成果発表のためのサポートもスタートし、領域内共同研究が期待通りに成果をあげつつあることが確認された。
領域活動の広報としては、日本生物物理学会など関連学会でのシンポジウムや、分子モーター討論会などの関連分野の集会の共催を積極的に行うとともに、本領域の領域会議での勉強会の内容を発展させた情報熱力学の教科書を沙川が出版し、理工系専門書としては異例の売り上げを達成した。

Current Status of Research Progress
Current Status of Research Progress

1: Research has progressed more than it was originally planned.

Reason

コロナ禍の影響から脱し、対面での領域会議の再開など、実験勉強会、理論勉強会の開催など、当初から計画していた活動を漸く行うことができた。これまでの連携強化の方策も奏功し、領域内で多くの共同研究が進められるとともに、成果も出始めており、最終年度に向けて期待される。

Strategy for Future Research Activity

コロナ禍の影響から脱したので、23年度も引き続き、対面での領域会議、実験勉強会、理論勉強会などの企画を継続発展させる。また、コロナ禍で実施できていない国際交流についても、今後強化していきたい。

Report

(4 results)
  • 2022 Annual Research Report
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • Research Products

    (440 results)

All 2023 2022 2021 2020 2019 Other

All Journal Article (182 results) (of which Int'l Joint Research: 41 results,  Peer Reviewed: 182 results,  Open Access: 131 results) Presentation (243 results) (of which Int'l Joint Research: 23 results,  Invited: 226 results) Book (14 results) Remarks (1 results)

  • [Journal Article] Structure-function Relationship of the Fastest Myosin2023

    • Author(s)
      伊藤光二,原口武士,玉那覇正典,鈴木花野,村田武士
    • Journal Title

      Seibutsu Butsuri

      Volume: 63 Issue: 2 Pages: 91-96

    • DOI

      10.2142/biophys.63.91

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Trans-cis isomerization kinetics of cyanine dyes reports on the folding states of exogeneous RNA G-quadruplexes in live cells2023

    • Author(s)
      Kitamura Akira、Tornmalm Johan、Demirbay Baris、Piguet Joachim、Kinjo Masataka、Widengren Jerker
    • Journal Title

      Nucleic Acids Research

      Volume: 51 Issue: 5 Pages: e27-e27

    • DOI

      10.1093/nar/gkac1255

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Intracellular Conformation of Amyotrophic Lateral Sclerosis-Causative TDP-432023

    • Author(s)
      Kitamura Akira、Yuno Sachiko、Kawamura Rintaro、Kinjo Masataka
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 24 Issue: 6 Pages: 5513-5513

    • DOI

      10.3390/ijms24065513

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Geometric thermodynamics for the Fokker?Planck equation: stochastic thermodynamic links between information geometry and optimal transport2023

    • Author(s)
      Sosuke Ito
    • Journal Title

      Information geometry

      Volume: 1 Issue: S1 Pages: 1-42

    • DOI

      10.1007/s41884-023-00102-3

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Origin, prospective identification, and function of circulating endothelial colony-forming cells in mice and humans2023

    • Author(s)
      Lin Yang、Banno Kimihiko、Gil Chang-Hyun、Myslinski Jered、Hato Takashi、Shelley William C.、Gao Hongyu、Xuei Xiaoling、Liu Yunlong、Basile David P.、Yoshimoto Momoko、Prasain Nutan、Tarnawsky Stefan P.、Adams Ralf H.、Naruse Katsuhiko、Yoshida Junko、Murphy Michael P.、Horie Kyoji、Yoder Mervin C.
    • Journal Title

      JCI Insight

      Volume: 8 Issue: 5

    • DOI

      10.1172/jci.insight.164781

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Nonthermal Fluctuation Accelerates Molecular Motor Kinesin2023

    • Author(s)
      有賀隆行 , 立石圭人 , 富重道雄 , 水野大介
    • Journal Title

      Seibutsu Butsuri

      Volume: 63 Issue: 2 Pages: 86-90

    • DOI

      10.2142/biophys.63.86

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Optical Control of Cell Signaling with Red/Far-Red Light-Responsive Optogenetic Tools in Caenorhabditis elegans2023

    • Author(s)
      Oda Shigekazu、Sato-Ebine Emi、Nakamura Akinobu、Kimura Koutarou D.、Aoki Kazuhiro
    • Journal Title

      ACS Synthetic Biology

      Volume: 12 Issue: 3 Pages: 700-708

    • DOI

      10.1021/acssynbio.2c00461

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Impaired factor V-related anticoagulant mechanisms and deep vein thrombosis associated with A2086D and W1920R mutations.2023

    • Author(s)
      Shimonishi Naruto、Ogiwara Kenichi、Yoshida Junko、Horie Kyoji、Nakajima Yuto、Furukawa Shoko、Takeyama Masahiro、Nogami Keiji
    • Journal Title

      Blood Advances

      Volume: - Issue: 12 Pages: 2831-2842

    • DOI

      10.1182/bloodadvances.2022008918

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Decoding cellular deformation from pseudo-simultaneously observed Rho GTPase activities2023

    • Author(s)
      Katsuyuki Kunida Nobuhiro Takagi Kazuhiro Aoki Kazushi Ikeda Takeshi Nakamura Yuichi Sakumura
    • Journal Title

      Cell Reports

      Volume: 42 Issue: 2 Pages: 1-16

    • DOI

      10.1016/j.celrep.2023.112071

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] In vivo expression vector derived from anhydrobiotic tardigrade genome enables live imaging in Eutardigrada2023

    • Author(s)
      Tanaka Sae、Aoki Kazuhiro、Arakawa Kazuharu
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 120 Issue: 5

    • DOI

      10.1073/pnas.2216739120

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Deep Reinforcement Learning for Preparation of Thermal and Prethermal Quantum States2023

    • Author(s)
      Baba Shotaro Z.、Yoshioka Nobuyuki、Ashida Yuto、Sagawa Takahiro
    • Journal Title

      Physical Review Applied

      Volume: 19 Issue: 1 Pages: 014068-014068

    • DOI

      10.1103/physrevapplied.19.014068

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Filamentous structures in the cell envelope are associated with bacteroidetes gliding machinery2023

    • Author(s)
      Shibata Satoshi, Tahara Yuhei O., Katayama Eisaku, Kawamoto Akihiro, Kato Takayuki, Zhu Yongtao, Nakane Daisuke, Namba Keiichi, Miyata Makoto, McBride Mark J., Nakayama Koji
    • Journal Title

      Communications Biology

      Volume: 6 Issue: 1 Pages: 94-94

    • DOI

      10.1038/s42003-023-04472-3

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Forward-Backward Sweep Method for the System of HJB-FP Equations in Memory-Limited Partially Observable Stochastic Control2023

    • Author(s)
      Tottori Takehiro、Kobayashi Tetsuya J.
    • Journal Title

      Entropy

      Volume: 25 Issue: 2 Pages: 208-208

    • DOI

      10.3390/e25020208

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Housekeeping and excess entropy production for general nonlinear dynamics2023

    • Author(s)
      Kohei Yoshimura, Artemy Kolchinsky, Andreas Dechant, Sosuke Ito
    • Journal Title

      Physical Review Research

      Volume: 5 Issue: 1 Pages: 013017-013017

    • DOI

      10.1103/physrevresearch.5.013017

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Loss of Flagella-Related Genes Enables a Nonflagellated, Fungal-Predating Bacterium To Strengthen the Synthesis of an Antifungal Weapon2023

    • Author(s)
      Xiong Dan、Yang Zixiang、He Xueting、He Weimei、Shen Danyu、Wang Lu、Lin Long、Murero Aprodisia、Minamino Tohru、Shao Xiaolong、Qian Guoliang
    • Journal Title

      Microbiology Spectrum

      Volume: 11 Issue: 1

    • DOI

      10.1128/spectrum.04149-22

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quasi-two-dimensional bacterial swimming around pillars: Enhanced trapping efficiency and curvature dependence2023

    • Author(s)
      Takaha Yuki、Nishiguchi Daiki
    • Journal Title

      Physical Review E

      Volume: 107 Issue: 1 Pages: 014602-014602

    • DOI

      10.1103/physreve.107.014602

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Asymptotic solutions to nonlinear Hawkes processes: A systematic classification of the steady-state solutions2023

    • Author(s)
      Kiyoshi Kanazawa, Didier Sornette
    • Journal Title

      Physical Review Research

      Volume: 5 Issue: 1 Pages: 013067-013067

    • DOI

      10.1103/physrevresearch.5.013067

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Rational social distancing in epidemics with uncertain vaccination timing2023

    • Author(s)
      Schnyder Simon K.、Molina John J.、Yamamoto Ryoichi、Turner Matthew S.
    • Journal Title

      PLOS ONE

      Volume: 18 Issue: 7 Pages: e0288963-e0288963

    • DOI

      10.1371/journal.pone.0288963

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Simulating Reaction Time for Eureka Effect in Visual Object Recognition Using Artificial Neural Network2023

    • Author(s)
      Hosoda Kazufumi、Seno Shigeto、Murata Tsutomu
    • Journal Title

      IIAI Letters on Informatics and Interdisciplinary Research

      Volume: 3 Pages: 1

    • DOI

      10.52731/liir.v003.060

    • ISSN
      2758-2221
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Sphingomyelin metabolism underlies Ras excitability for efficient cell migration and chemotaxis2023

    • Author(s)
      Shin Da Young、Takagi Hiroaki、Hiroshima Michio、Matsuoka Satomi、Ueda Masahiro
    • Journal Title

      Cell Structure and Function

      Volume: 48 Issue: 2 Pages: 145-160

    • DOI

      10.1247/csf.23045

    • ISSN
      0386-7196, 1347-3700
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] LapTrack: linear assignment particle tracking with tunable metrics2023

    • Author(s)
      Yohsuke T Fukai, Kyogo Kawaguchi
    • Journal Title

      Bioinformatics

      Volume: 39 Issue: 1

    • DOI

      10.1093/bioinformatics/btac799

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Comparison of CRISPR/Cas9-mediated megabase-scale genome deletion methods in mouse embryonic stem cells2023

    • Author(s)
      Masayuki Miyata, Junko Yoshida, Itsuki Takagishi, Kyoji Horie
    • Journal Title

      DNA Research

      Volume: 30 Issue: 1

    • DOI

      10.1093/dnares/dsac045

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Regulation of spermatogenic stem cell homeostasis by mitogen competition in an open niche microenvironment2022

    • Author(s)
      Yu Kitadate and Shosei Yoshida
    • Journal Title

      Genes & Genetic Systems

      Volume: 97 Issue: 1 Pages: 15-25

    • DOI

      10.1266/ggs.21-00062

    • NAID

      130008158203

    • ISSN
      1341-7568, 1880-5779
    • Year and Date
      2022-02-01
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Theoretical Computational Analysis Predicts Interaction Changes Due to Differences of a Single Molecule in DNA2022

    • Author(s)
      Koseki Jun、Hirose Haruka、Konno Masamitsu、Shimamura Teppei
    • Journal Title

      Applied Sciences

      Volume: 13 Issue: 1 Pages: 510-510

    • DOI

      10.3390/app13010510

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Interference of flagellar rotation up-regulates the expression of small RNA contributing to <i>Bordetella pertussis</i> infection2022

    • Author(s)
      Hiramatsu Yukihiro、Nishida Takashi、Nugraha Dendi Krisna、Osada-Oka Mayuko、Nakane Daisuke、Imada Katsumi、Horiguchi Yasuhiko
    • Journal Title

      Science Advances

      Volume: 8 Issue: 51

    • DOI

      10.1126/sciadv.ade8971

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Tilt-induced polar order and topological defects in growing bacterial populations2022

    • Author(s)
      Shimaya Takuro、Takeuchi Kazumasa A
    • Journal Title

      PNAS Nexus

      Volume: 1 Issue: 5

    • DOI

      10.1093/pnasnexus/pgac269

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Chemoreceptor Sensory Adaptation System Produces Coordinated Reversals of the Flagellar Motors on an Escherichia coli Cell2022

    • Author(s)
      Yumiko Uchida, Tatsuki Hamamoto, Yong-Suk Che, Hiroto Takahashi, John S. Parkinson, Akihiko Ishijima, Hajime Fukuoka
    • Journal Title

      Journal of Bacteriology

      Volume: 204 Issue: 12

    • DOI

      10.1128/jb.00278-22

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] cGMP dynamics that underlies thermosensation in temperature-sensing neuron regulates thermotaxis behavior in C. elegans2022

    • Author(s)
      Aok Ichiro、Shiota Makoto、Tsukada Yuki、Nakano Shunji、Mori Ikue
    • Journal Title

      PLOS ONE

      Volume: 17 Issue: 12 Pages: e0278343-e0278343

    • DOI

      10.1371/journal.pone.0278343

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Interscale entanglement production in a quantum system simulating classical chaos2022

    • Author(s)
      Taiki Haga and Shin-ich Sasa
    • Journal Title

      Journal of Statistical Mechanics: Theory and Experiment

      Volume: 2022 Issue: 12 Pages: 123102-123102

    • DOI

      10.1088/1742-5468/aca2a1

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Self‐Assembled Micro‐Sized Hexagons Built from Short DNA in a Crowded Environment2022

    • Author(s)
      Makino Tetsunao、Nakane Daisuke、Tanaka Makiko
    • Journal Title

      ChemBioChem

      Volume: 23 Issue: 22

    • DOI

      10.1002/cbic.202200360

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Gradual differentiation uncoupled from cell cycle exit generates heterogeneity in the epidermal stem cell layer2022

    • Author(s)
      Cockburn Katie、Annusver Karl、Gonzalez David G.、Ganesan Smirthy、May Dennis P.、Mesa Kailin R.、Kawaguchi Kyogo、Kasper Maria、Greco Valentina
    • Journal Title

      Nature Cell Biology

      Volume: 24 Issue: 12 Pages: 1692-1700

    • DOI

      10.1038/s41556-022-01021-8

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Memory-Limited Partially Observable Stochastic Control and Its Mean-Field Control Approach2022

    • Author(s)
      Tottori Takehiro、Kobayashi Tetsuya J.
    • Journal Title

      Entropy

      Volume: 24 Issue: 11 Pages: 1599-1599

    • DOI

      10.3390/e24111599

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Activation mechanism of the bacterial flagellar dual-fuel protein export engine2022

    • Author(s)
      Minamino Tohru、Kinoshita Miki、Morimoto Yusuke V.、Namba Keiichi
    • Journal Title

      Biophysics and Physicobiology

      Volume: 19 Issue: 0 Pages: n/a

    • DOI

      10.2142/biophysico.bppb-v19.0046

    • ISSN
      2189-4779
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quasi-static Decomposition and the Gibbs Factorial in Small Thermodynamic Systems2022

    • Author(s)
      Sasa Shin-ichi、Hiura Ken、Nakagawa Naoko、Yoshida Akira
    • Journal Title

      Journal of Statistical Physics

      Volume: 189 Issue: 2 Pages: 31-31

    • DOI

      10.1007/s10955-022-02991-7

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] An explainable deep learning-based algorithm with an attention mechanism for predicting the live birth potential of mouse embryos2022

    • Author(s)
      Tokuoka Yuta、Yamada Takahiro G.、Mashiko Daisuke、Ikeda Zenki、Kobayashi Tetsuya J.、Yamagata Kazuo、Funahashi Akira
    • Journal Title

      Artificial Intelligence in Medicine

      Volume: 134 Pages: 102432-102432

    • DOI

      10.1016/j.artmed.2022.102432

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Tracing the developmental origin of tissue stem cells2022

    • Author(s)
      Morita Ritsuko、Fujiwara Hironobu
    • Journal Title

      Development, Growth &amp; Differentiation

      Volume: 64 Issue: 9 Pages: 566-576

    • DOI

      10.1111/dgd.12816

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cytoplasmic delivery of siRNA using human-derived membrane penetration-enhancing peptide.2022

    • Author(s)
      Nakamura, M., Fujiwara, K., Doi, N.
    • Journal Title

      Journal of Nanobiotechnology

      Volume: 20 Issue: 1 Pages: 458-458

    • DOI

      10.1186/s12951-022-01667-4

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Controlling the Periodicity of a Reaction-Diffusion Wave in Artificial Cells by a Two-Way Energy Supplier2022

    • Author(s)
      Takada Sakura、Yoshinaga Natsuhiko、Doi Nobuhide、Fujiwara Kei
    • Journal Title

      ACS Nano

      Volume: 16 Issue: 10 Pages: 16853-16861

    • DOI

      10.1021/acsnano.2c06756

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Information-geometric structure for chemical thermodynamics: An explicit construction of dual affine coordinates2022

    • Author(s)
      Naruo Ohga and Sosuke Ito
    • Journal Title

      Physical Review E

      Volume: 106 Issue: 4 Pages: 044131-044131

    • DOI

      10.1103/physreve.106.044131

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Riemannian geometry of optimal driving and thermodynamic length and its application to chemical reaction networks2022

    • Author(s)
      Loutchko Dimitri、Sughiyama Yuki、Kobayashi Tetsuya J.
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 4 Pages: 043049-043049

    • DOI

      10.1103/physrevresearch.4.043049

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Application of time lags between light and temperature cycles for growth control based on the circadian clock of Lactuca sativa L. seedlings2022

    • Author(s)
      Masuda Kosaku、Yamada Tatsuya、Kagawa Yuya、Fukuda Hirokazu
    • Journal Title

      Frontiers in Plant Science

      Volume: 13

    • DOI

      10.3389/fpls.2022.994555

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cell-Size Space Regulates the Behavior of Confined Polymers: From Nano- and Micromaterials Science to Biology2022

    • Author(s)
      Yanagisawa Miho、Watanabe Chiho、Yoshinaga Natsuhiko、Fujiwara Kei
    • Journal Title

      Langmuir

      Volume: 38 Issue: 39 Pages: 11811-11827

    • DOI

      10.1021/acs.langmuir.2c01397

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Scaling and spontaneous symmetry restoring of topological defect dynamics in liquid crystal2022

    • Author(s)
      Zushi Yohei、Takeuchi Kazumasa A.
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 119 Issue: 41

    • DOI

      10.1073/pnas.2207349119

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A genetically encoded far‐red fluorescent calcium ion biosensor derived from a biliverdin‐binding protein2022

    • Author(s)
      Hashizume Rina、Fujii Hajime、Mehta Sohum、Ota Keisuke、Qian Yong、Zhu Wenchao、Drobizhev Mikhail、Nasu Yusuke、Zhang Jin、Bito Haruhiko、Campbell Robert E.
    • Journal Title

      Protein Science

      Volume: 31 Issue: 10

    • DOI

      10.1002/pro.4440

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A feedback loop between lamellipodial extension and HGF-ERK signaling specifies leader cells during collective cell migration2022

    • Author(s)
      Hino Naoya、Matsuda Kimiya、Jikko Yuya、Maryu Gembu、Sakai Katsuya、Imamura Ryu、Tsukiji Shinya、Aoki Kazuhiro、Terai Kenta、Hirashima Tsuyoshi、Trepat Xavier、Matsuda Michiyuki
    • Journal Title

      Developmental Cell

      Volume: 57 Issue: 19 Pages: 2290-2304

    • DOI

      10.1016/j.devcel.2022.09.003

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Phase Growth with Heat Diffusion in a Stochastic Lattice Model2022

    • Author(s)
      Hiraizumi Mao、Ohta Hiroki、Sasa Shin-ichi
    • Journal Title

      Journal of Statistical Physics

      Volume: 189 Issue: 2 Pages: 1-21

    • DOI

      10.1007/s10955-022-02990-8

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reconstitution of Microtubule into GTP-Responsive Nanocapsules2022

    • Author(s)
      Noriyuki Uchida, Ai Kohata, Kou Okuro, Annalisa Cardellini, Chiara Lionello, Eric A. Zizzi, Marco A. Deriu, Giovanni M. Pavan, Michio Tomishige, Takaaki Hikima, and Takuzo Aida
    • Journal Title

      Nat. Commun.

      Volume: 13 Issue: 1 Pages: 5424-5424

    • DOI

      10.1038/s41467-022-33156-5

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Hessian geometry of nonequilibrium chemical reaction networks and entropy production decompositions2022

    • Author(s)
      Kobayashi Tetsuya J.、Loutchko Dimitri、Kamimura Atsushi、Sughiyama Yuki
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 3 Pages: 033208-033208

    • DOI

      10.1103/physrevresearch.4.033208

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genetic screens identified dual roles of microtubule-associated serine threonine kinase and CREB within a single thermosensory neuron in the regulation of Caenorhabditis elegans thermotaxis behavior2022

    • Author(s)
      Nakano Shunji、Nakayama Airi、Kuroyanagi Hiroo、Yamashiro Riku、Tsukada Yuki、Mori Ikue
    • Journal Title

      G3 Genes|Genomes|Genetics

      Volume: 12 Issue: 11

    • DOI

      10.1093/g3journal/jkac248

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] An analysis modality for vascular structures combining tissue-clearing technology and topological data analysis2022

    • Author(s)
      Takahashi K, Abe K, Kubota SI, Fukatsu N, Morishita Y, Yoshimatsu Y, Satoshi Hirakawa, Yoshiaki Kubota, Tetsuro Watabe, Shogo Ehata, Hiroki R. Ueda, Teppei Shimamura, Kohei Miyazono
    • Journal Title

      Nature Communiactions

      Volume: 13 Issue: 1 Pages: 5239-5239

    • DOI

      10.1038/s41467-022-32848-2

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chemical thermodynamics for growing systems2022

    • Author(s)
      Sughiyama Yuki、Kamimura Atsushi、Loutchko Dimitri、Kobayashi Tetsuya J.
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 3 Pages: 033191-033191

    • DOI

      10.1103/physrevresearch.4.033191

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Stress-dependent cell stiffening by tardigrade tolerance proteins that reversibly form a filamentous network and gel2022

    • Author(s)
      Tanaka Akihiro、Nakano Tomomi、Watanabe Kento、Masuda Kazutoshi、Honda Gen、Kamata Shuichi、Yasui Reitaro、Kozuka-Hata Hiroko、Watanabe Chiho、Chinen Takumi、Kitagawa Daiju、Sawai Satoshi、Oyama Masaaki、Yanagisawa Miho、Kunieda Takekazu
    • Journal Title

      PLOS Biology

      Volume: 20 Issue: 9 Pages: 3001780-3001780

    • DOI

      10.1371/journal.pbio.3001780

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Probing the rules of cell coordination in live tissues by interpretable machine learning based on graph neural networks2022

    • Author(s)
      Yamamoto Takaki、Cockburn Katie、Greco Valentina、Kawaguchi Kyogo
    • Journal Title

      PLOS Computational Biology

      Volume: 18 Issue: 9 Pages: e1010477-e1010477

    • DOI

      10.1371/journal.pcbi.1010477

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PHi-C2: interpreting Hi-C data as the dynamic 3D genome state2022

    • Author(s)
      Shinkai Soya、Itoga Hiroya、Kyoda Koji、Onami Shuichi
    • Journal Title

      Bioinformatics

      Volume: 38 Issue: 21 Pages: 4984-4986

    • DOI

      10.1093/bioinformatics/btac613

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Competition between cell types under cell cycle regulation with apoptosis2022

    • Author(s)
      Li Jintao、Schnyder Simon K.、Turner Matthew S.、Yamamoto Ryoichi
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 3 Pages: 033156-033156

    • DOI

      10.1103/physrevresearch.4.033156

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Unique extension of the maximum entropy principle to phase coexistence in heat conduction2022

    • Author(s)
      Nakagawa Naoko、Sasa Shin-ichi
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 3 Pages: 033155-033155

    • DOI

      10.1103/physrevresearch.4.033155

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Geometric decomposition of entropy production into excess, housekeeping, and coupling parts2022

    • Author(s)
      Andreas Dechant, Shin-ichi Sasa, Sosuke Ito
    • Journal Title

      Physical Review E

      Volume: 106 Issue: 2 Pages: 024125-024125

    • DOI

      10.1103/physreve.106.024125

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Conserved GYXLI Motif of FlhA Is Involved in Dynamic Domain Motions of FlhA Required for Flagellar Protein Export2022

    • Author(s)
      Minamino Tohru、Kinoshita Miki、Inoue Yumi、Kitao Akio、Namba Keiichi
    • Journal Title

      Microbiology Spectrum

      Volume: 10 Issue: 4

    • DOI

      10.1128/spectrum.01110-22

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Kinetic derivation of the Hessian geometric structure in chemical reaction networks2022

    • Author(s)
      Kobayashi Tetsuya J.、Loutchko Dimitri、Kamimura Atsushi、Sughiyama Yuki
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 3 Pages: 033066-033066

    • DOI

      10.1103/physrevresearch.4.033066

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Hessian geometric structure of chemical thermodynamic systems with stoichiometric constraints2022

    • Author(s)
      Sughiyama Yuki、Loutchko Dimitri、Kamimura Atsushi、Kobayashi Tetsuya J.
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 3 Pages: 033065-033065

    • DOI

      10.1103/physrevresearch.4.033065

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Comparative Study of Repertoire Classification Methods Reveals Data Efficiency of k-mer Feature Extraction2022

    • Author(s)
      Katayama Yotaro、Kobayashi Tetsuya J.
    • Journal Title

      Frontiers in Immunology

      Volume: 13

    • DOI

      10.3389/fimmu.2022.797640

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantum hydrodynamics from local thermal pure states2022

    • Author(s)
      Shoichiro Tsutsui, Masaru Hongo, Shintaro Sato, and Takahiro Sagawa,
    • Journal Title

      Phys. Rev. Research

      Volume: 4 Issue: 3

    • DOI

      10.1103/physrevresearch.4.033059

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Machine Learning Approaches to TCR Repertoire Analysis2022

    • Author(s)
      Katayama Yotaro、Yokota Ryo、Akiyama Taishin、Kobayashi Tetsuya J.
    • Journal Title

      Frontiers in Immunology

      Volume: 13 Pages: 858057-858057

    • DOI

      10.3389/fimmu.2022.858057

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cell shape controls rheotaxis in small parasitic bacteria2022

    • Author(s)
      Nakane Daisuke, Kabata Yoshiki, Nishizaka Takayuki
    • Journal Title

      PLOS Pathogens

      Volume: 18 Issue: 7 Pages: e1010648-e1010648

    • DOI

      10.1371/journal.ppat.1010648

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Calcium sparks enhance the tissue fluidity within epithelial layers and promote apical extrusion of transformed cells2022

    • Author(s)
      Kuromiya K, Aoki K, Ishibashi K, Yotabun M, Sekai M, Tanimura N, Iijima S, Ishikawa S, Kamasaki T, Akieda Y, Ishitani T, Hayashi T, Toda S, Yokoyama K, Lee CG, Usami I, Inoue H, Takigawa I, Gauquelin E, Sugimura K, Hino N, Fujita Y
    • Journal Title

      Cell Reports

      Volume: 40 Issue: 2 Pages: 111078-111078

    • DOI

      10.1016/j.celrep.2022.111078

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Active colloid with externally induced periodic bipolar motility and its cooperative motion2022

    • Author(s)
      Kato Airi N.、Takeuchi Kazumasa A.、Sano Masaki
    • Journal Title

      Soft Matter

      Volume: 18 Issue: 29 Pages: 5435-5445

    • DOI

      10.1039/d2sm00363e

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] The trunk?tail junctional region in <i>Ciona</i> larvae autonomously expresses tail-beating bursts at ?20?second intervals2022

    • Author(s)
      Hara Takashi、Hasegawa Shuya、Iwatani Yasushi、Nishino Atsuo S.
    • Journal Title

      Journal of Experimental Biology

      Volume: 225 Issue: 13

    • DOI

      10.1242/jeb.243828

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A highly photostable and bright green fluorescent protein2022

    • Author(s)
      Hirano Masahiko、Ando Ryoko、Shimozono Satoshi、Sugiyama Mayu、Takeda Noriyo、Kurokawa Hiroshi、Deguchi Ryusaku、Endo Kazuki、Haga Kei、Takai-Todaka Reiko、Inaura Shunsuke、Matsumura Yuta、Hama Hiroshi、Okada Yasushi、Fujiwara Takahiro、Morimoto Takuya、Katayama Kazuhiko、Miyawaki Atsushi
    • Journal Title

      Nature Biotechnology

      Volume: - Issue: 7 Pages: 1132-1142

    • DOI

      10.1038/s41587-022-01278-2

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] c-Src-mediated phosphorylation and activation of kinesin KIF1C promotes elongation of invadopodia in cancer cells2022

    • Author(s)
      Saji Takeshi、Nishita Michiru、Ikeda Kazuho、Endo Mitsuharu、Okada Yasushi、Minami Yasuhiro
    • Journal Title

      Journal of Biological Chemistry

      Volume: 298 Issue: 7 Pages: 102090-102090

    • DOI

      10.1016/j.jbc.2022.102090

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Thermodynamic role of main reaction pathway and multi-body information flow in membrane transport2022

    • Author(s)
      Satoshi Yoshida, Yasushi Okada, Eiro Muneyuki, and Sosuke Ito
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 2 Pages: 023229-023229

    • DOI

      10.1103/physrevresearch.4.023229

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Exceptional mode topological surface laser2022

    • Author(s)
      Sone Kazuki、Ashida Yuto、Sagawa Takahiro
    • Journal Title

      Physical Review B

      Volume: 105 Issue: 23 Pages: 235426-235426

    • DOI

      10.1103/physrevb.105.235426

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Characterizing the Asymmetry in Hardness between Synthesis and Destruction of Heteropolymers2022

    • Author(s)
      Kobayashi Ikumi、Sasa Shin-ichi
    • Journal Title

      Physical Review Letters

      Volume: 128 Issue: 24 Pages: 247801-247801

    • DOI

      10.1103/physrevlett.128.247801

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Topological synchronization of coupled nonlinear oscillators2022

    • Author(s)
      Sone Kazuki、Ashida Yuto、Sagawa Takahiro
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 2 Pages: 023211-023211

    • DOI

      10.1103/physrevresearch.4.023211

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mode selection mechanism in traveling and standing waves revealed by Min wave reconstituted in artificial cells2022

    • Author(s)
      Takada Sakura、Yoshinaga Natsuhiko、Doi Nobuhide、Fujiwara Kei
    • Journal Title

      Science Advances

      Volume: 8 Issue: 23

    • DOI

      10.1126/sciadv.abm8460

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A mechanism with severing near barbed ends and annealing explains structure and dynamics of dendritic actin networks2022

    • Author(s)
      Holz Danielle、Hall Aaron R、Usukura Eiji、Yamashiro Sawako、Watanabe Naoki、Vavylonis Dimitrios
    • Journal Title

      eLife

      Volume: 11

    • DOI

      10.7554/elife.69031

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Macroscopic Stability of Time Evolution of Gibbs Measures2022

    • Author(s)
      Lefevere Raphael、Sasa Shin-ichi
    • Journal Title

      Journal of Statistical Physics

      Volume: 188 Issue: 2 Pages: 1-20

    • DOI

      10.1007/s10955-022-02943-1

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Single-nucleosome imaging reveals steady-state motion of interphase chromatin in living human cells2022

    • Author(s)
      Iida Shiori、Shinkai Soya、Itoh Yuji、Tamura Sachiko、Kanemaki Masato T.、Onami Shuichi、Maeshima Kazuhiro
    • Journal Title

      Science Advances

      Volume: 8 Issue: 22

    • DOI

      10.1126/sciadv.abn5626

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Asynchronous division at 4-8-cell stage of preimplantation embryos affects live birth through ICM/TE differentiation2022

    • Author(s)
      Mashiko Daisuke、Ikeda Zenki、Tokoro Mikiko、Hatano Yu、Yao Tatsuma、Kobayashi Tetsuya J.、Fukunaga Noritaka、Asada Yoshimasa、Yamagata Kazuo
    • Journal Title

      Scientific Reports

      Volume: 12 Issue: 1 Pages: 9411-9411

    • DOI

      10.1038/s41598-022-13646-8

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] In utero electroporation and cranial window implantation for in vivo wide-field two-photon calcium imaging using G-CaMP9a transgenic mice.2022

    • Author(s)
      Sakamoto M, Ota K, Kondo Y, Okamura M, Fujii H, Bito H.
    • Journal Title

      Star Protocols

      Volume: 3 Issue: 2 Pages: 101421-101421

    • DOI

      10.1016/j.xpro.2022.101421

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Structural Rule Distinguishing a Superfold: A Case Study of Ferredoxin Fold and the Reverse Ferredoxin Fold2022

    • Author(s)
      Nishina Takumi、Nakajima Megumi、Sasai Masaki、Chikenji George
    • Journal Title

      Molecules

      Volume: 27 Issue: 11 Pages: 3547-3547

    • DOI

      10.3390/molecules27113547

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] MARK2 regulates directed cell migration through modulation of myosin II contractility and focal adhesion organization2022

    • Author(s)
      Pasapera Ana M.、Heissler Sarah M.、Eto Masumi、Nishimura Yukako、Fischer Robert S.、Thiam Hawa R.、Waterman Clare M.
    • Journal Title

      Current Biology

      Volume: 32 Issue: 12 Pages: 2704-2718.e6

    • DOI

      10.1016/j.cub.2022.04.088

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Thermosynechococcus switches the direction of phototaxis by a c-di-GMP-dependent process with high spatial resolution2022

    • Author(s)
      Nakane Daisuke, Enomoto Gen, Bahre Heike, Hirose Yuu, Wilde Annegret, Nishizaka Takayuki
    • Journal Title

      eLife

      Volume: 11 Pages: 73405-73405

    • DOI

      10.7554/elife.73405

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Design Principles of the Rotary Type 9 Secretion System2022

    • Author(s)
      Trivedi Abhishek, Gosai Jitendrapuri, Nakane Daisuke, Shrivastava Abhishek
    • Journal Title

      Frontiers in Microbiology

      Volume: 13 Pages: 845563-845563

    • DOI

      10.3389/fmicb.2022.845563

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Nonlinear master relation in microscopic mechanical response of semiflexible biopolymer networks2022

    • Author(s)
      N Honda, K Shiraki, F van Esterik, S Inokuchi, H Ebata and DMizuno
    • Journal Title

      New Journal of Physics

      Volume: 24 Issue: 5 Pages: 053031-053031

    • DOI

      10.1088/1367-2630/ac6902

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Insight Into Distinct Functional Roles of the Flagellar ATPase Complex for Flagellar Assembly in Salmonella2022

    • Author(s)
      Minamino Tohru、Kinoshita Miki、Namba Keiichi
    • Journal Title

      Frontiers in Microbiology

      Volume: 13 Pages: 864178-864178

    • DOI

      10.3389/fmicb.2022.864178

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Generation of dynamic three-dimensional genome structure through phase separation of chromatin2022

    • Author(s)
      Fujishiro Shin、Sasai Masaki
    • Journal Title

      Proceedings of the National Academy of Sciences USA

      Volume: 119 Issue: 22

    • DOI

      10.1073/pnas.2109838119

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Exact solution to two-body financial dealer model: revisited from the viewpoint of kinetic theory2022

    • Author(s)
      Kiyoshi Kanazawa, Hideki Takayasu, Misako Takayasu
    • Journal Title

      Journal of Statistical Physics

      Volume: 190 Issue: 1 Pages: 8-8

    • DOI

      10.1007/s10955-022-03022-1

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantitative live-cell imaging of GPCR downstream signaling dynamics2022

    • Author(s)
      Tany Ryosuke、Goto Yuhei、Kondo Yohei、Aoki Kazuhiro
    • Journal Title

      Biochemical Journal

      Volume: 479 Issue: 8 Pages: 883-900

    • DOI

      10.1042/bcj20220021

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quantum Fluctuation Theorem under Quantum Jumps with Continuous Measurement and Feedback2022

    • Author(s)
      Toshihiro Yada, Nobuyuki Yoshioka, Takahiro Sagawa,
    • Journal Title

      Phys. Rev. Lett.

      Volume: 128 Issue: 17

    • DOI

      10.1103/physrevlett.128.170601

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] XY model for cascade transfer2022

    • Author(s)
      Tanogami Tomohiro、Sasa Shin-ichi
    • Journal Title

      Physical Review Research

      Volume: 4 Issue: 2

    • DOI

      10.1103/physrevresearch.4.l022015

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Onsager-Machlup Integral for Non-Reciprocal Systems with Odd Elasticity2022

    • Author(s)
      Yasuda Kento、Kobayashi Akira、Lin Li-Shing、Hosaka Yuto、Sou Isamu、Komura Shigeyuki
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 91 Issue: 1 Pages: 015001-015001

    • DOI

      10.7566/jpsj.91.015001

    • NAID

      210000159508

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Emergent stripes of active rotors in shear flows2021

    • Author(s)
      Zhao Zhiyuan、Wang Boyi、Komura Shigeyuki、Yang Mingcheng、Ye Fangfu、Seto Ryohei
    • Journal Title

      Physical Review Research

      Volume: 3 Issue: 4 Pages: 043229-043229

    • DOI

      10.1103/physrevresearch.3.043229

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Hydrodynamic lift of a two-dimensional liquid domain with odd viscosity2021

    • Author(s)
      Hosaka Yuto、Komura Shigeyuki、Andelman David
    • Journal Title

      Physical Review E

      Volume: 104 Issue: 6 Pages: 064613-064613

    • DOI

      10.1103/physreve.104.064613

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Complete Genome Sequence of Leptospira kobayashii Strain E30, Isolated from Soil in Japan2021

    • Author(s)
      Nakao Ryo、Masuzawa Toshiyuki、Nakamura Shuichi、Koizumi Nobuo
    • Journal Title

      Microbiology Resource Announcements

      Volume: 10 Issue: 45

    • DOI

      10.1128/mra.00907-21

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Interaction between Spike Protein of SARS-CoV-2 and Human Virus Receptor ACE2 Using Two-Color Fluorescence Cross-Correlation Spectroscopy2021

    • Author(s)
      Fujimoto Ai、Lyu Yidan、Kinjo Masataka、Kitamura Akira
    • Journal Title

      Applied Sciences

      Volume: 11 Issue: 22 Pages: 10697-10697

    • DOI

      10.3390/app112210697

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Noise-Induced Acceleration of Single Molecule Kinesin-12021

    • Author(s)
      Ariga Takayuki、Tateishi Keito、Tomishige Michio、Mizuno Daisuke
    • Journal Title

      Physical Review Letters

      Volume: 127 Issue: 17 Pages: 178101-178101

    • DOI

      10.1103/physrevlett.127.178101

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multiple Roles of Flagellar Export Chaperones for Efficient and Robust Flagellar Filament Formation in Salmonella2021

    • Author(s)
      Minamino Tohru、Morimoto Yusuke V.、Kinoshita Miki、Namba Keiichi
    • Journal Title

      Frontiers in Microbiology

      Volume: 12 Pages: 756044-756044

    • DOI

      10.3389/fmicb.2021.756044

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Rheology of the Dynamic 3D Genome Organization2021

    • Author(s)
      SHINKAI Soya
    • Journal Title

      Seibutsu Butsuri

      Volume: 61 Issue: 5 Pages: 293-297

    • DOI

      10.2142/biophys.61.293

    • NAID

      130008093158

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Unstable Phase Response Curves Shown by Spatiotemporal Patterns in the Plant Root Circadian Clock2021

    • Author(s)
      Masuda Kosaku、Fukuda Hirokazu
    • Journal Title

      Journal of Biological Rhythms

      Volume: 36 Issue: 5 Pages: 432-441

    • DOI

      10.1177/07487304211028440

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Genetic Analysis of the Salmonella FliE Protein That Forms the Base of the Flagellar Axial Structure2021

    • Author(s)
      Hendriksen Jordan J.、Lee Hee Jung、Bradshaw Alexander J.、Namba Keiichi、Chevance Fabienne F. V.、Minamino Tohru、Hughes Kelly T.
    • Journal Title

      mBio

      Volume: 12 Issue: 5

    • DOI

      10.1128/mbio.02392-21

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Crawling motility of Treponema denticola modulated by outer sheath protein2021

    • Author(s)
      Eitoyo Kokubu, Yuichiro Kikuchi, Kazuko Okamoto-Shibayama, Shuichi Nakamura, Kazuyuki Ishihara
    • Journal Title

      Microbiology and immunology

      Volume: 65 Issue: 12 Pages: 551-558

    • DOI

      10.1111/1348-0421.12940

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Structure of the molecular bushing of the bacterial flagellar motor2021

    • Author(s)
      Yamaguchi Tomoko、Makino Fumiaki、Miyata Tomoko、Minamino Tohru、Kato Takayuki、Namba Keiichi
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 4469-4469

    • DOI

      10.1038/s41467-021-24715-3

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Native flagellar MS ring is formed by 34 subunits with 23-fold and 11-fold subsymmetries2021

    • Author(s)
      Kawamoto Akihiro、Miyata Tomoko、Makino Fumiaki、Kinoshita Miki、Minamino Tohru、Imada Katsumi、Kato Takayuki、Namba Keiichi
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 4223-4223

    • DOI

      10.1038/s41467-021-24507-9

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Conformational stabilization of optineurin by the dynamic interaction of linear polyubiquitin2021

    • Author(s)
      Kitamura Akira、Numazawa Rika、Kinjo Masataka
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 559 Pages: 203-209

    • DOI

      10.1016/j.bbrc.2021.04.103

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular ruler of the attachment organelle in Mycoplasma pneumoniae2021

    • Author(s)
      Nakane Daisuke、Murata Kohki、Kenri Tsuyoshi、Shibayama Keigo、Nishizaka Takayuki
    • Journal Title

      PLOS Pathogens

      Volume: 17 Issue: 6 Pages: e1009621-e1009621

    • DOI

      10.1371/journal.ppat.1009621

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nonreciprocality of a micromachine driven by a catalytic chemical reaction2021

    • Author(s)
      Yasuda Kento、Komura Shigeyuki
    • Journal Title

      Physical Review E

      Volume: 103 Issue: 6 Pages: 062113-062113

    • DOI

      10.1103/physreve.103.062113

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Odd Microswimmer2021

    • Author(s)
      Yasuda Kento、Hosaka Yuto、Sou Isamu、Komura Shigeyuki
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 90 Issue: 7 Pages: 075001-075001

    • DOI

      10.7566/jpsj.90.075001

    • NAID

      210000159108

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Membrane voltage-dependent activation mechanism of the bacterial flagellar protein export apparatus2021

    • Author(s)
      Minamino Tohru、Morimoto Yusuke V.、Kinoshita Miki、Namba Keiichi
    • Journal Title

      Proc. Natl. Acad. Sci. USA.

      Volume: 118 Issue: 22

    • DOI

      10.1073/pnas.2026587118

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Presynaptic inhibition of dopamine neurons controls optimistic bias2021

    • Author(s)
      Yamagata Nobuhiro、Ezaki Takahiro、Takahashi Takahiro、Wu Hongyang、Tanimoto Hiromu
    • Journal Title

      eLife

      Volume: 10

    • DOI

      10.7554/elife.64907

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The FlhA linker mediates flagellar protein export switching during flagellar assembly2021

    • Author(s)
      Inoue Yumi、Kinoshita Miki、Kida Mamoru、Takekawa Norihiro、Namba Keiichi、Imada Katsumi、Minamino Tohru
    • Journal Title

      Communications Biology

      Volume: 4 Issue: 1 Pages: 646-646

    • DOI

      10.1038/s42003-021-02177-z

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantitative evaluation of macromolecular crowding environment based on translational and rotational diffusion using polarization dependent fluorescence correlation spectroscopy2021

    • Author(s)
      Yamamoto Johtaro、Matsui Akito、Gan Fusako、Oura Makoto、Ando Riku、Matsuda Takahiro、Gong Jian Ping、Kinjo Masataka
    • Journal Title

      Scientific Reports

      Volume: 11 Issue: 1 Pages: 10594-10594

    • DOI

      10.1038/s41598-021-89987-7

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Recent Advances in the Bacterial Flagellar Motor Study2021

    • Author(s)
      Minamino Tohru、Namba Keiichi
    • Journal Title

      Biomolecules

      Volume: 11 Issue: 5 Pages: 741-741

    • DOI

      10.3390/biom11050741

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Disassembly of the apical junctional complex during the transmigration of Leptospira interrogans across polarized renal proximal tubule epithelial cells2021

    • Author(s)
      Sebastian I, Okura N, Humbel BM, Xu J, Hermawan I, Matsuura C, Hall M, Takayama C, Yamashiro T, Nakamura S, Toma C
    • Journal Title

      Cellular Microbiology

      Volume: 印刷中 Issue: 9 Pages: 1-17

    • DOI

      10.1111/cmi.13343

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A population of neurons that produce hugin and express the diuretic hormone 44 receptor gene projects to the corpora allata in Drosophila melanogaster2021

    • Author(s)
      Mizuno Yosuke、Imura Eisuke、Kurogi Yoshitomo、Shimada‐Niwa Yuko、Kondo Shu、Tanimoto Hiromu、Huckesfeld Sebastian、Pankratz Michael J.、Niwa Ryusuke
    • Journal Title

      Development, Growth & Differentiation

      Volume: 63 Issue: 4-5 Pages: 249-261

    • DOI

      10.1111/dgd.12733

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Cooperative stator assembly of bacterial flagellar motor mediated by rotation2021

    • Author(s)
      Ito Kenta I.、Nakamura Shuichi、Toyabe Shoichi
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 3218-3218

    • DOI

      10.1038/s41467-021-23516-y

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nonreciprocal response of a two-dimensional fluid with odd viscosity2021

    • Author(s)
      Hosaka Yuto、Komura Shigeyuki、Andelman David
    • Journal Title

      Physical Review E

      Volume: 103 Issue: 4 Pages: 042610-042610

    • DOI

      10.1103/physreve.103.042610

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Large-scale vortices with dynamic rotation emerged from monolayer collective motion of gliding Flavobacteria2021

    • Author(s)
      Nakane D, Odaka S, Suzuki K, Nishizaka T
    • Journal Title

      Journal of Bacteriology

      Volume: 203 Issue: 14

    • DOI

      10.1128/jb.00073-21

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Detection of protein aggregation using fluorescence correlation spectroscopy.2021

    • Author(s)
      Kitamura Akira, Fujimoto Ai, Kinjo Masakata
    • Journal Title

      Journal of Visualized Experiments

      Volume: 170 Issue: 170

    • DOI

      10.3791/62576

    • NAID

      120007097384

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular basis of functional exchangeability between ezrin and other actin-membrane associated proteins during cytokinesis2021

    • Author(s)
      Yang Guang、Hiruma Shota、Kitamura Akira、Kinjo Masataka、Mishra Mithilesh、Uehara Ryota
    • Journal Title

      Experimental Cell Research

      Volume: 403 Issue: 2 Pages: 112600-112600

    • DOI

      10.1016/j.yexcr.2021.112600

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Brownian motion of a charged colloid in restricted confinement2021

    • Author(s)
      Avni Yael、Komura Shigeyuki、Andelman David
    • Journal Title

      Physical Review E

      Volume: 103 Issue: 4 Pages: 042607-042607

    • DOI

      10.1103/physreve.103.042607

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A positive charge region of Salmonella FliI is required for ATPase formation and efficient flagellar protein export.2021

    • Author(s)
      Kinoshita M, Namba K, Minamino T.
    • Journal Title

      Commun. Biol.

      Volume: 4 Issue: 1 Pages: 464-464

    • DOI

      10.1038/s42003-021-01980-y

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 3DeeCellTracker, a deep learning-based pipeline for segmenting and tracking cells in 3D time lapse images2021

    • Author(s)
      Wen Chentao、Miura Takuya、Voleti Venkatakaushik、Yamaguchi Kazushi、Tsutsumi Motosuke、Yamamoto Kei、Otomo Kohei、Fujie Yukako、Teramoto Takayuki、Ishihara Takeshi、Aoki Kazuhiro、Nemoto Tomomi、Hillman Elizabeth MC、Kimura Koutarou D
    • Journal Title

      eLife

      Volume: 10

    • DOI

      10.7554/elife.59187

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Connection between the Bacterial Chemotactic Network and Optimal Filtering2021

    • Author(s)
      Kento Nakamura, Tetsuya J. Kobayashi
    • Journal Title

      Physical Review Letters

      Volume: 126 Issue: 12 Pages: 128102-128102

    • DOI

      10.1103/physrevlett.126.128102

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Learning the best nanoscale heat engines through evolving network topology2021

    • Author(s)
      Ashida Yuto, Sagawa Takahiro
    • Journal Title

      COMMUNICATIONS PHYSICS

      Volume: 4

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Two-Round Ca 2+ transient in papillae by mechanical stimulation induces metamorphosis in the ascidian Ciona intestinalis type A2021

    • Author(s)
      Wakai Maiki K, Nakamura Mitsuru J, Sawai Satoshi, Hotta Kohji, Oka Kotaro
    • Journal Title

      PROCEEDINGS OF THE ROYAL SOCIETY B: BIOLOGICAL SCIENCES

      Volume: 288 Issue: 1945 Pages: 20203207-20203207

    • DOI

      10.1098/rspb.2020.3207

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Information geometric inequalities of chemical thermodynamics2021

    • Author(s)
      Yoshimura Kohei, Ito Sosuke
    • Journal Title

      PHYSICAL REVIEW RESEARCH

      Volume: 3 Issue: 1 Pages: 013175-013175

    • DOI

      10.1103/physrevresearch.3.013175

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Hierarchical modeling of mechano-chemical dynamics of epithelial sheets across cells and tissue2021

    • Author(s)
      Asakura Yoshifumi、Kondo Yohei、Aoki Kazuhiro、Naoki Honda
    • Journal Title

      Scientific Reports

      Volume: 11 Issue: 1 Pages: 4069-4069

    • DOI

      10.1038/s41598-021-83396-6

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Effective Langevin equations leading to large deviation function of time-averaged velocity for a nonequilibrium Rayleigh piston2021

    • Author(s)
      Itami Masato、Nakayama Yohei、Nakagawa Naoko、Sasa Shin-ichi
    • Journal Title

      Physical Review E

      Volume: 103 Issue: 2 Pages: 022125-022125

    • DOI

      10.1103/physreve.103.022125

    • NAID

      120007164841

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Visualization and Manipulation of Intracellular Signaling2021

    • Author(s)
      Goto Yuhei、Kondo Yohei、Aoki Kazuhiro
    • Journal Title

      Adv Exp Med Biol.

      Volume: 1 Pages: 225-234

    • DOI

      10.1007/978-981-15-8763-4_13

    • ISBN
      9789811587627, 9789811587634
    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Behavior of information flow near criticality2021

    • Author(s)
      Meijers Matthijs, Ito Sosuke, Wolde Pieter Rein ten
    • Journal Title

      PHYSICAL REVIEW E

      Volume: 103 Issue: 1

    • DOI

      10.1103/physreve.103.l010102

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Oncogenic mutation or overexpression of oncogenic KRAS or BRAF is not sufficient to confer oncogene addiction.2021

    • Author(s)
      Ito Reina E, Oneyama Chitose, Aoki Kazuhiro
    • Journal Title

      PLOS ONE

      Volume: 16 Issue: 4 Pages: e0249388-e0249388

    • DOI

      10.1371/journal.pone.0249388

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] NUDT21 Links Mitochondrial IPS-1 to RLR-Containing Stress Granules and Activates Host Antiviral Defense2020

    • Author(s)
      Saeko Aoyama-Ishiwatari, Tomohiko Okazaki, Shun-ichiro Iemura, Tohru Natsume, Yasushi Okada, Yukiko Gotoh
    • Journal Title

      The Journal of Immunology

      Volume: 206 Issue: 1 Pages: 154-163

    • DOI

      10.4049/jimmunol.2000306

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A microtubule-LUZP1 association around tight junction promotes epithelial cell apical constriction2020

    • Author(s)
      Yano Tomoki、Tsukita Kazuto、Kanoh Hatsuho、Nakayama Shogo、Kashihara Hiroka、Mizuno Tomoaki、Tanaka Hiroo、Matsui Takeshi、Goto Yuhei、Komatsubara Akira、Aoki Kazuhiro、Takahashi Ryosuke、Tamura Atsushi、Tsukita Sachiko
    • Journal Title

      The EMBO Journal

      Volume: 40 Issue: 2

    • DOI

      10.15252/embj.2020104712

    • URL

      https://localhost/en/publications/5b8a970c-0f27-4635-b2eb-3af07674acb9

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 3D convolutional neural networks-based segmentation to acquire quantitative criteria of the nucleus during mouse embryogenesis2020

    • Author(s)
      Tokuoka Yuta、Yamada Takahiro G.、Mashiko Daisuke、Ikeda Zenki、Hiroi Noriko F.、Kobayashi Tetsuya J.、Yamagata Kazuo、Funahashi Akira
    • Journal Title

      npj Systems Biology and Applications

      Volume: 6 Issue: 1 Pages: 32-32

    • DOI

      10.1038/s41540-020-00152-8

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Improvement of Phycocyanobilin Synthesis for Genetically Encoded Phytochrome-Based Optogenetics2020

    • Author(s)
      Uda Youichi、Miura Haruko、Goto Yuhei、Yamamoto Kei、Mii Yusuke、Kondo Yohei、Takada Shinji、Aoki Kazuhiro
    • Journal Title

      ACS Chemical Biology

      Volume: 15 Issue: 11 Pages: 2896-2906

    • DOI

      10.1021/acschembio.0c00477

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Fluctuations in Intracellular CheY-P Concentration Coordinate Reversals of Flagellar Motors in E. coli2020

    • Author(s)
      Che Yong-Suk, Sagawa Takashi, Inoue Yuichi, Takahashi Hiroto, Hamamoto Tatsuki, Ishijima Akihiko, Fukuoka Hajime
    • Journal Title

      BIOMOLECULES

      Volume: 10 Issue: 11 Pages: 1544-1544

    • DOI

      10.3390/biom10111544

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Exceptional non-Hermitian topological edge mode and its application to active matter2020

    • Author(s)
      Sone Kazuki、Ashida Yuto、Sagawa Takahiro
    • Journal Title

      Nature Communications

      Volume: 11 Issue: 1 Pages: 5745-5745

    • DOI

      10.1038/s41467-020-19488-0

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Optimizing a quantum reservoir computer for time series prediction2020

    • Author(s)
      Aki Kutvonen, Keisuke Fujii, and Takahiro Sagawa,
    • Journal Title

      Scientific Reports

      Volume: 10 Issue: 1 Pages: 14687-14687

    • DOI

      10.1038/s41598-020-71673-9

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A Method for Automatic Tracking of Cell Nuclei with Weakly-Supervised Mitosis Detection in 2D Microscopy Image Sequences2020

    • Author(s)
      Kondratiev Alexandr Yu, Yaginuma Hideyuki, Okada Yasushi, Krylov Andrey S, Sorokin Dmitry V
    • Journal Title

      ACM INTERNATIONAL CONFERENCE PROCEEDING SERIES

      Volume: 0

    • DOI

      10.1145/3417519.3417558

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Unified framework for the entropy production and the stochastic interaction based on information geometry2020

    • Author(s)
      Sosuke Ito, Masafumi Oizumi, Shun-ichi Amari
    • Journal Title

      Physical Review Research

      Volume: 2 Issue: 3 Pages: 033048-033048

    • DOI

      10.1103/physrevresearch.2.033048

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Numerical Verification of the Fluctuation-Dissipation Theorem for Isolated Quantum Systems2020

    • Author(s)
      Jae Dong Noh, Takahiro Sagawa, and Joonhyun Yeo,
    • Journal Title

      Phys. Rev. Lett.

      Volume: 125 Issue: 5 Pages: 050603-050603

    • DOI

      10.1103/physrevlett.125.050603

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Single-Molecule Imaging of Intracellular Transport in Neurons and Non-neuronal Cells: From Microscope Optics to Sample Preparations2020

    • Author(s)
      Wang Jay Yuan Jian, Kambara Taketoshi, Okada Yasushi
    • Journal Title

      NEUROMETHODS

      Volume: 154 Pages: 1-10

    • DOI

      10.1007/978-1-0716-0532-5_1

    • ISBN
      9781071605318, 9781071605325
    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phosphatidic acid-dependent localization and basal de-phosphorylation of RA-GEFs regulate lymphocyte trafficking2020

    • Author(s)
      Ishihara Sayaka、Sato Tsuyoshi、Du Guangwei、Guardavaccaro Daniele、Nakajima Akihiko、Sawai Satoshi、Kataoka Tohru、Katagiri Koko
    • Journal Title

      BMC Biology

      Volume: 18 Issue: 1 Pages: 75-75

    • DOI

      10.1186/s12915-020-00809-0

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Direct Evidence for Universal Statistics of Stationary Kardar-Parisi-Zhang Interfaces2020

    • Author(s)
      Iwatsuka Takayasu、Fukai Yohsuke T.、Takeuchi Kazumasa A.
    • Journal Title

      Physical Review Letters

      Volume: 124 Issue: 25 Pages: 250602-250602

    • DOI

      10.1103/physrevlett.124.250602

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ERK-mediated mechanochemical waves direct collective cell polarization.2020

    • Author(s)
      Hino N, Rossetti L, Marin-Llaurad A, Aoki K, Trepat X, Matsuda M, Hirashima T.
    • Journal Title

      Developmental Cell

      Volume: 53 Issue: 6 Pages: 646-660

    • DOI

      10.1016/j.devcel.2020.05.011

    • NAID

      120006876575

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Stochastic Time Evolution, Information Geometry, and the Cramer-Rao Bound2020

    • Author(s)
      Sosuke Ito, Andreas Dechant
    • Journal Title

      Physical Review X

      Volume: 10(2) Issue: 2 Pages: 021056-021056

    • DOI

      10.1103/physrevx.10.021056

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Robust classification of cell cycle phase and biological feature extraction by image-based deep learning2020

    • Author(s)
      Nagao Yukiko、Sakamoto Mika、Chinen Takumi、Okada Yasushi、Takao Daisuke
    • Journal Title

      Molecular Biology of the Cell

      Volume: 31 Issue: 13 Pages: 1346-1354

    • DOI

      10.1091/mbc.e20-03-0187

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Estimating entropy production by machine learning of short-time fluctuating currents2020

    • Author(s)
      Shun Otsubo, Sosuke Ito, Andreas Dechant, and Takahiro Sagawa,
    • Journal Title

      Phys. Rev. E

      Volume: 101 Issue: 6 Pages: 062106-062106

    • DOI

      10.1103/physreve.101.062106

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Lineage EM algorithm for inferring latent states from cellular lineage trees2020

    • Author(s)
      Nakashima So、Sughiyama Yuki、Kobayashi Tetsuya J
    • Journal Title

      Bioinformatics

      Volume: 36 Issue: 9 Pages: 2829-2838

    • DOI

      10.1093/bioinformatics/btaa040

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Engineering orthogonal, plasma membrane-specific SLIPT systems for multiplexed chemical control of signaling pathways in living single cells2020

    • Author(s)
      Akinobu Nakamura, Choji Oki, Kenya Kato, Satoko Fujinuma, Gembu Maryu, Keiko Kuwata, Tatsuyuki Yoshii, Michiyuki Matsuda, Kazuhiro Aoki, Shinya Tsukiji
    • Journal Title

      ACS Chemical Biology

      Volume: 15 Issue: 4 Pages: 1004-1015

    • DOI

      10.1021/acschembio.0c00024

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Bayesian gates for reliable logical operations under noisy conditions2020

    • Author(s)
      Kobayashi Tetsuya J
    • Journal Title

      PHYSICAL REVIEW E

      Volume: 101 Issue: 4 Pages: 042205-042205

    • DOI

      10.1103/physreve.101.042205

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Equilibrium measurement method of slip length based on fluctuating hydrodynamics2020

    • Author(s)
      Nakano Hiroyoshi, Sasa Shin-ichi
    • Journal Title

      PHYSICAL REVIEW E

      Volume: 101 Issue: 3 Pages: 33109-33109

    • DOI

      10.1103/physreve.101.033109

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] An Improved Fluorescent Protein-Based Expression Reporter System That Utilizes Bioluminescence Resonance Energy Transfer and Peptide-Assisted Complementation2020

    • Author(s)
      Taishi Kakizuka, Akira Takai, Keiko Yoshizawa, Yasushi Okada, Tomonobu M Watanabe
    • Journal Title

      Chemical Communications

      Volume: 56 Issue: 25 Pages: 3625-3628

    • DOI

      10.1039/c9cc08664a

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Fluctuation窶途esponse inequality out of equilibrium2020

    • Author(s)
      Dechant Andreas, Sasa Shin-ichi
    • Journal Title

      PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES

      Volume: 117 Issue: 12 Pages: 6430-6436

    • DOI

      10.1073/pnas.1918386117

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improved secretion of glycoproteins using an N-glycan-restricted passport sequence tag recognized by cargo receptor2020

    • Author(s)
      Yagi Hirokazu、Yagi-Utsumi Maho、Honda Rena、Ohta Yusaku、Saito Taiki、Nishio Miho、Ninagawa Satoshi、Suzuki Kousuke、Anzai Takahiro、Kamiya Yukiko、Aoki Kazuhiro、Nakanishi Mahito、Satoh Tadashi、Kato Koichi
    • Journal Title

      Nature Communications

      Volume: 11 Issue: 1 Pages: 1-9

    • DOI

      10.1038/s41467-020-15192-1

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Single-molecule imaging of PI(4,5)P2 and PTEN in vitro reveals a positive feedback mechanism for PTEN membrane binding2020

    • Author(s)
      2.Yoshioka, D., Fukushima, S., Koteishi, H., Okuno, D., Ide, T., Matsuoka, S., and Ueda, M.
    • Journal Title

      Communications Biology

      Volume: 3 Issue: 1 Pages: 92-92

    • DOI

      10.1038/s42003-020-0818-3

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Talin B regulates collective cell migration via PI3K signaling in Dictyostelium discoideum mounds2020

    • Author(s)
      Shin-Ichi Yamazaki, Hidenori Hashimura, Yusuke V. Morimoto, Yukihiro Miyanaga, Satomi Matsuoka, Yoichiro Kamimura, Masahiro Ueda
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 525 Issue: 2 Pages: 372-377

    • DOI

      10.1016/j.bbrc.2020.02.060

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Kardar-Parisi-Zhang Interfaces with Curved Initial Shapes and Variational Formula2020

    • Author(s)
      Fukai Yohsuke T.、Takeuchi Kazumasa A.
    • Journal Title

      Physical Review Letters

      Volume: 124 Issue: 6 Pages: 060601-060601

    • DOI

      10.1103/physrevlett.124.060601

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phase separation organizes the site of autophagosome formation2020

    • Author(s)
      Fujioka Yuko、Alam Jahangir Md.、Noshiro Daisuke、Mouri Kazunari、Ando Toshio、Okada Yasushi、May Alexander I.、Knorr Roland L.、Suzuki Kuninori、Ohsumi Yoshinori、Noda Nobuo N.
    • Journal Title

      Nature

      Volume: 578 Issue: 7794 Pages: 301-305

    • DOI

      10.1038/s41586-020-1977-6

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Thermodynamic entropy as a Noether invariant in a Langevin equation2020

    • Author(s)
      Minami Yuki, Sasa Shin-Ichi
    • Journal Title

      JOURNAL OF STATISTICAL MECHANICS: THEORY AND EXPERIMENT

      Volume: 2020 Issue: 1 Pages: 13213-13213

    • DOI

      10.1088/1742-5468/ab5b8b

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reliable target ligand detection by noise-induced receptor cluster formation2020

    • Author(s)
      Kajita Masashi K.、Aihara Kazuyuki、Kobayashi Tetsuya J.
    • Journal Title

      Chaos: An Interdisciplinary Journal of Nonlinear Science

      Volume: 30 Issue: 1 Pages: 011104-011104

    • DOI

      10.1063/1.5140714

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Microscopic Reversibility and Macroscopic Irreversibility: From the Viewpoint of Algorithmic Randomness2019

    • Author(s)
      Hiura Ken, Sasa Shin-ichi
    • Journal Title

      JOURNAL OF STATISTICAL PHYSICS

      Volume: 177 Issue: 5 Pages: 727-751

    • DOI

      10.1007/s10955-019-02387-0

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Linking substrate and nucleus via actin cytoskeleton in pluripotency maintenance of mouse embryonic stem cells2019

    • Author(s)
      David Brit Gracy、Fujita Hideaki、Yasuda Kyota、Okamoto Kazuko、Panina Yulia、Ichinose Junya、Sato Osamu、Horie Masanobu、Ichimura Taro、Okada Yasushi、Watanabe Tomonobu M
    • Journal Title

      Stem Cell Research

      Volume: 41 Pages: 101614-101614

    • DOI

      10.1016/j.scr.2019.101614

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Macroscopic Thermodynamic Reversibility in Quantum Many-Body Systems2019

    • Author(s)
      Philippe Faist, Takahiro Sagawa, Kohtaro Kato, Hiroshi Nagaoka, and Fernando G. S. L. Brand&atilde;o,
    • Journal Title

      Physical Review Letters

      Volume: 123 Issue: 25

    • DOI

      10.1103/physrevlett.123.250601

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Chromatin state switching in a polymer model with mark-conformation coupling2019

    • Author(s)
      Adachi Kyosuke, Kawaguchi Kyogo
    • Journal Title

      PHYSICAL REVIEW E

      Volume: 100 Issue: 6

    • DOI

      10.1103/physreve.100.060401

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Global Thermodynamics for Heat Conduction Systems2019

    • Author(s)
      Naoko Nakagawa, Shin-ichi Sasa
    • Journal Title

      Journal of Statistical Physics

      Volume: 177 Issue: 5 Pages: 825-888

    • DOI

      10.1007/s10955-019-02393-2

    • NAID

      120006895420

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantitative analysis reveals reciprocal regulations underlying recovery dynamics of thymocytes and thymic environment in mice2019

    • Author(s)
      Kaneko Kazumasa B.、Tateishi Ryosuke、Miyao Takahisa、Takakura Yuki、Akiyama Nobuko、Yokota Ryo、Akiyama Taishin、Kobayashi Tetsuya J.
    • Journal Title

      Communications Biology

      Volume: 2 Issue: 1 Pages: 444-444

    • DOI

      10.1038/s42003-019-0688-8

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Information thermodynamics for interacting stochastic systems without bipartite structure2019

    • Author(s)
      R. Ch&eacute;trite, M. L. Rosinberg, T. Sagawa, and G. Tarjus,
    • Journal Title

      Journal of Statistical Mechanics

      Volume: 11402 Issue: 11 Pages: 1-55

    • DOI

      10.1088/1742-5468/ab47fe

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Fitness Gain of Individually Sensed Information by Cells2019

    • Author(s)
      Kobayashi Tetsuya J.、Sughiyama Yuki
    • Journal Title

      Entropy

      Volume: 21 Issue: 10 Pages: 1002-1002

    • DOI

      10.3390/e21101002

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enhancement algorithms for blinking fluorescence imaging2019

    • Author(s)
      Pchelintsev Yakov, Nasonov Andrey, Krylov Andrey, Enoki Sawako, Okada Yasushi
    • Journal Title

      ACM INTERNATIONAL CONFERENCE PROCEEDING SERIES

      Volume: 0 Pages: 72-77

    • DOI

      10.1145/3366174.3366183

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A large pool of actively cycling progenitors orchestrates self-renewal and injury repair of an ectodermal appendage.2019

    • Author(s)
      Sharir Amnon, Marangoni Pauline, Zilionis Rapolas, Wan Mian, Wald Tomas, Hu Jimmy K, Kawaguchi Kyogo, Castillo-Azofeifa David, Epstein Leo, Harrington Kyle, Pagella Pierfrancesco, Mitsiadis Thimios, Siebel Christian W, Klein Allon M, Klein Ophir D
    • Journal Title

      NATURE CELL BIOLOGY

      Volume: 21 Issue: 9 Pages: 1102-1112

    • DOI

      10.1038/s41556-019-0378-2

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A photostable fluorescent marker for the superresolution live imaging of the dynamic structure of the mitochondrial cristae.2019

    • Author(s)
      Wang C, Taki M, Sato Y, Tamura Y, Yaginuma H, Okada Y, Yamaguchi S.
    • Journal Title

      Proc Natl Acad Sci U S A.

      Volume: 116 Issue: 32 Pages: 15817-15822

    • DOI

      10.1073/pnas.1905924116

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Shannon’s information theory 70 years on: applications in classical and quantum physics2019

    • Author(s)
      Gerardo Adesso, Nilanjana Datta, Michael J W Hall, Takahiro Sagawa
    • Journal Title

      Journal of Physics A: Mathematical and Theoretical

      Volume: 52 Issue: 32 Pages: 1-4

    • DOI

      10.1088/1751-8121/ab25b7

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Statistical Mechanical Expressions of Slip Length2019

    • Author(s)
      Nakano Hiroyoshi, Sasa Shin-ichi
    • Journal Title

      JOURNAL OF STATISTICAL PHYSICS

      Volume: 176 Issue: 2 Pages: 312-357

    • DOI

      10.1007/s10955-019-02302-7

    • NAID

      130008147994

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Heating and cooling of quantum gas by eigenstate Joule expansion2019

    • Author(s)
      Noh Jae Dong、Iyoda Eiki、Sagawa Takahiro
    • Journal Title

      Physical Review E

      Volume: 100 Issue: 1 Pages: 010106-010106

    • DOI

      10.1103/physreve.100.010106

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Neuron-specific knockdown of Drosophila HADHB induces a shortened lifespan, deficient locomotive ability, abnormal motor neuron terminal morphology and learning disability.2019

    • Author(s)
      Li J, Suda K, Ueoka I, Tanaka R, Yoshida H, Okada Y, Okamoto Y, Hiramatsu Y, Takashima H, Yamaguchi M.
    • Journal Title

      Exp. Cell Res.

      Volume: 379 Issue: 2 Pages: 150-158

    • DOI

      10.1016/j.yexcr.2019.03.040

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Reconstruction of Par-dependent polarity in apolar cells reveals a dynamic process of cortical polarization2019

    • Author(s)
      Kono K, Yoshiura S, Fujita I, Okada Y, Shitamukai A, Shibata T, Matsuzaki F
    • Journal Title

      eLife

      Volume: 8 Pages: 1-31

    • DOI

      10.7554/elife.45559

    • NAID

      120006653006

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Universal scrambling in gapless quantum spin chains2019

    • Author(s)
      Nakamura Shunsuke、Iyoda Eiki、Deguchi Tetsuo、Sagawa Takahiro
    • Journal Title

      Physical Review B

      Volume: 99 Issue: 22 Pages: 224305-224305

    • DOI

      10.1103/physrevb.99.224305

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Peroxisomes control mitochondrial dynamics and the mitochondrion-dependent pathway of apoptosis.2019

    • Author(s)
      Tanaka, H., *Okazaki, T., Aoyama, S., Yokota, M., Koike, M., Okada, Y., Fujiki, Y., and Gotoh, Y.
    • Journal Title

      J. Cell Sci.

      Volume: - Issue: 11

    • DOI

      10.1242/jcs.224766

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Tissue self-organization based on collective cell migration by contact activation of locomotion and chemotaxis2019

    • Author(s)
      Fujimori Taihei、Nakajima Akihiko、Shimada Nao、Sawai Satoshi
    • Journal Title

      Proceedings of the National Academy of Sciences USA

      Volume: 116 Issue: 10 Pages: 4291-4296

    • DOI

      10.1073/pnas.1815063116

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Lane formation and critical coarsening in a model of bacterial competition2019

    • Author(s)
      Shimaya Takuro、Takeuchi Kazumasa A.
    • Journal Title

      Physical Review E

      Volume: 99 Issue: 4 Pages: 042403-042403

    • DOI

      10.1103/physreve.99.042403

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Single-cell quantification of the concentrations and dissociation constants of endogenous proteins2019

    • Author(s)
      Akira T Komatsubara, Yuhei Goto, Yohei Kondo, Michiyuki Matsuda, Kazuhiro Aoki
    • Journal Title

      Journal of Biological Chemistry

      Volume: 294 Issue: 15 Pages: 6062-6072

    • DOI

      10.1074/jbc.ra119.007685

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Presentation] Molecular a;Functional Analysis of;myosin with chiral activity2023

    • Author(s)
      伊藤 光二
    • Organizer
      2023 Ajou-Chiba Joint Symposium Chiba University
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Molecular and Functional Analysis of myosin with chiral activity2023

    • Author(s)
      伊藤 光二
    • Organizer
      Yamada Conference LXXV: Origin of left‐right asymmetry in animals
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 機械学習・人工知能を活用したライブセルイメージング2023

    • Author(s)
      岡田 康志
    • Organizer
      第128回日本解剖学会総会・全国学術集会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 蛍光ライブセルイメージングの限界への挑戦2023

    • Author(s)
      岡田 康志
    • Organizer
      大阪大学微生物病研究所アドバンストセミナー
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 蛍光ライブセルイメージングの限界への挑戦2023

    • Author(s)
      岡田 康志
    • Organizer
      光塾
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 場のマスター方程式を用いた非マルコフ点過程の漸近解法:非線形ホークス過程とその拡張2023

    • Author(s)
      金澤 輝代士
    • Organizer
      情報処理学会北海道支部主催講演会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 量子測定の基礎と量子熱力学への応用2023

    • Author(s)
      沙川 貴大
    • Organizer
      量子ICTフォーラム 量子計測・センシング基礎講座
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 量子連続制御下の情報熱力学2023

    • Author(s)
      沙川 貴大
    • Organizer
      KEK 素核研・物構研 連携研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Three Approaches to Quantum Thermodynamics2023

    • Author(s)
      沙川 貴大
    • Organizer
      量子情報と量子基礎論の諸側面
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 生命とは何か、何がわかれば嬉しいのだろうか:人工細胞、人工生態系、人工知能を例に2023

    • Author(s)
      細田 一史
    • Organizer
      第16回生物学基礎論研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Force transmission via dynamic stretching of Talin as revealed by live-cell single-molecule imaging2023

    • Author(s)
      山城 佐和子
    • Organizer
      American Physical Society March Meeting
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] リソース制約部分観測最適制御理論:生体情報処理の理解にむけた自由エネルギー原理とは違うルート2023

    • Author(s)
      小林 徹也
    • Organizer
      「あいまい脳」 班会議
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Noise generation by sphingomyelin metabolism optimizes Ras excitability for cell migration2023

    • Author(s)
      松岡 里実
    • Organizer
      Gordon Research Conference: Directed Cell Migration
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] "Telescope model” for coordinated organ morphogenesis and stem cell formation2023

    • Author(s)
      森田 梨津子
    • Organizer
      The 4th RIKEN BDR-Kobe University Joint Symposium
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] アクティブ乱流の気持ち:如何にして秩序化し、如何にして乱れるか?2023

    • Author(s)
      西口 大貴
    • Organizer
      統計物理学懇談会(第10回)
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Route from vortex order to active turbulence2023

    • Author(s)
      西口 大貴
    • Organizer
      Japan-France joint seminar "Physics of dense and active disordered materials"
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Quantitative analysis of cell cycle by live-cell imaging and optogenetics2023

    • Author(s)
      青木 一洋
    • Organizer
      The 3rd NINS-Princeton Joint Symposium EMERGING LIFE SCIENCES
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 蛍光プローブと光遺伝学を用いた細胞周期の定量解析2023

    • Author(s)
      青木 一洋
    • Organizer
      イメージングブートキャンプ2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞内シグナル伝達系の可視化と光操作2023

    • Author(s)
      青木 一洋
    • Organizer
      EVIDENT Creative Forum 2023 Online 『次世代研究者と語る、これからのライブイメージング - New ERA of Live Cell Imaging with EVIDENT -』
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Topology and active matter physics in cultured nematic cells2023

    • Author(s)
      川口 喬吾
    • Organizer
      The University of Cambridge Morphogenesis Seminar Series
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] On the origin of appetite: GLWamide in jellyfish represents an ancestral satiety neuropeptide2023

    • Author(s)
      谷本 拓
    • Organizer
      第19回国際シンポジウム”味覚嗅覚の分子神経機構”
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 単一神経細胞内のシナプスの多様性とその制御2023

    • Author(s)
      谷本 拓
    • Organizer
      2022年度生理研研究会 ナノ・メゾスケールから捉えるシナプス制御機構の新展開
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Bacterial Glass2023

    • Author(s)
      竹内 一将
    • Organizer
      Japan-France joint seminar "Physics of dense and active disordered materials"
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細菌のドリル戦車2023

    • Author(s)
      中根 大介
    • Organizer
      第96回 日本細菌学会総会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 非熱的にゆらぐ細胞内環境に最適化する生体分子モーター2023

    • Author(s)
      有賀 隆行
    • Organizer
      Workshop OT 2023 最適輸送とその周辺 ? 機械学習から熱力学的最適化まで
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Did the tape run twice? Morphogenesis of amoebozoa Dictyostelium - cell polarity, cell migration and cell rearrangement2023

    • Author(s)
      澤井 哲
    • Organizer
      The 3rd NINS-Princeton Joint Symposium EMERGING LIFE SCIENCES
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞・器官にキラリティを誘導するミオシンが創発するアクチン・キラリティリング2022

    • Author(s)
      伊藤 光二
    • Organizer
      第11回分子モーター討論会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Functional analysis of plant-specific myosin XIs2022

    • Author(s)
      伊藤 光二
    • Organizer
      ABA, APPA & TBS JOINT CONGRESS 202
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 植物成長とミオシン2022

    • Author(s)
      伊藤 光二
    • Organizer
      第250回有機エレクトロニクス材料研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Possible applications of optimal transport: From biological data processing to thermodynamics2022

    • Author(s)
      伊藤 創祐
    • Organizer
      Sendai 2022, An Update on Molecular Machines:Open Challenges and New Perspectives
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Information-geometric speed limit for biochemical information processing2022

    • Author(s)
      伊藤 創祐
    • Organizer
      The 74th Annual Meeting of the Japan Society for Cell Biology
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Optimal transport theory as a geometric theory of non-equilibrium thermodynamics2022

    • Author(s)
      伊藤 創祐
    • Organizer
      StatPhys Seminar @ UTokyoHongo
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] ライブイメージングの限界を超える2022

    • Author(s)
      岡田 康志
    • Organizer
      北海道大学ニコンイメージングセンター学術講演会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] ライブイメージングの限界を超える2022

    • Author(s)
      岡田 康志
    • Organizer
      順天堂大学イメージングセンターキックオフシンポジウム
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 超解像・一分子顕微鏡技術を用いた細胞内分子動態の計測2022

    • Author(s)
      岡田 康志
    • Organizer
      薬物動態学会第37回年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 基礎研究と製品開発のニーズとシーズ2022

    • Author(s)
      岡田 康志
    • Organizer
      T-Gex研究成果エキシビション
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 超解像技術と蛍光寿命を用いた最新バイオイメージング2022

    • Author(s)
      岡田 康志
    • Organizer
      ライカオンラインセミナー
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞や分子を見て、判るためのイメージング2022

    • Author(s)
      岡田 康志
    • Organizer
      奈良県立医大特別講義
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] シン・ライブセルイメージング2022

    • Author(s)
      岡田 康志
    • Organizer
      健都イメージングサポート拠点キックオフシンポジウム『シン・ミクロの世界』
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 4次元イメージング2022

    • Author(s)
      岡田 康志
    • Organizer
      第33回細胞生物学ワークショップ
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 分子・細胞のライブイメージングからバイオDXへ2022

    • Author(s)
      岡田 康志
    • Organizer
      生物工学懇話会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 実験自動化からバイオDXへ2022

    • Author(s)
      岡田 康志
    • Organizer
      情報計算化学生物学会第433回講演会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Toward super spatiotemporal resolution fluorescence microscope for live imaging of molecules and cells2022

    • Author(s)
      岡田 康志
    • Organizer
      OPIC, ALPS, 2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Unique Molecular Properties of Cardiac Myosin Essential for Heart Contraction2022

    • Author(s)
      茅 元司
    • Organizer
      World Congress of Biomechanics
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 情報理論と非平衡統計物理の融合2022

    • Author(s)
      沙川 貴大
    • Organizer
      学振R025委員会フォーラム
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] On the existence of complete thermodynamic potentials for quantum systems2022

    • Author(s)
      沙川 貴大
    • Organizer
      Quantum resources: from mathematical foundations to operational characterization
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 情報処理の熱力学2022

    • Author(s)
      沙川 貴大
    • Organizer
      人工知能学会 SIGNAC 第37回研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 情報熱力学入門2022

    • Author(s)
      沙川 貴大
    • Organizer
      第11回分子モーター討論会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Quantum Fluctuation Theorems under Measurement and Feedback2022

    • Author(s)
      沙川 貴大
    • Organizer
      Dynamic Days Asia Pacific 12
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Thermodynamics of information2022

    • Author(s)
      沙川 貴大
    • Organizer
      ICTP-KIAS School on Statistical Physics for Life Sciences
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Quantum Fluctuation Theorem with Continuous Measurement and Feedback2022

    • Author(s)
      沙川 貴大
    • Organizer
      Stochastic Thermodynamics: Recent Developments
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Non-Hermitian and Nonlinear Topology of Active Matter2022

    • Author(s)
      沙川 貴大
    • Organizer
      Cell, Energetics, and information: New perspectives on nonequilibrium systems
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 人工知能・人工生態・起業・クラファン2022

    • Author(s)
      細田 一史
    • Organizer
      第7回細胞生物若手の会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 蛍光単分子イメージングで明らかにする流動力伝達の仕組み2022

    • Author(s)
      山城 佐和子
    • Organizer
      定量生物学の会 第十回年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞内蛍光単分子イメージングによるアクチン線維流動力伝達機構の解明2022

    • Author(s)
      山城 佐和子
    • Organizer
      第11回分子モーター討論会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Information Geometry of Equilibrium and Nonequilibrium Chemical Reaction Networks2022

    • Author(s)
      小林 徹也
    • Organizer
      Workshop on Non-equilibrium Phenomena in Physics and Biology
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] T細胞系の定量生物学:発生からレパトアまで2022

    • Author(s)
      小林 徹也
    • Organizer
      第2回ASHBi 数理ヒト生物学研究会 (MathHuB研究会)
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Chemical Thermodynamics of Growing Systems2022

    • Author(s)
      小林 徹也
    • Organizer
      ICTP-KIAS School on Statistical Physics for Life Sciences
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Cell competition in a hybrid mechanochemical model2022

    • Author(s)
      小林 徹也
    • Organizer
      25th Anniversary Symposium of German-Japanese Joint Research Project on Nonequilibrium Statistical Physics Perspectives for Future Collaboration
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] グラフ・ハイパーグラフ上のダイナミクスの情報幾何学2022

    • Author(s)
      小林 徹也
    • Organizer
      JST数学関連3領域連携WS「情報科学と拓く新しい数理科学」
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Hessian Geometric Structure of Equilibrium and Nonequilibrium Chemical Reaction Newtworks2022

    • Author(s)
      小林 徹也
    • Organizer
      理研 iTEMSセミナー
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Polymer physics for Hi-C data reveals rheological features of chromatin2022

    • Author(s)
      新海 創也
    • Organizer
      第45回日本分子生物学会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 流体力学的相互作用が駆動する3次元ゲノム組織化2022

    • Author(s)
      新海 創也
    • Organizer
      第45回日本分子生物学会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] "Telescope model” for coordinated organ morphogenesis and stem cell formation2022

    • Author(s)
      森田 梨津子
    • Organizer
      The 45th Annual Meeting of the Molecular Biology Society of Japan
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] "Telescope model” for coordinated organ morphogenesis and stem cell formation2022

    • Author(s)
      森田 梨津子
    • Organizer
      ISRB Webinars
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 毛包発生と幹細胞誘導を支える 「テレスコープモデル」2022

    • Author(s)
      森田 梨津子
    • Organizer
      第73回日本皮膚科学会中部支部学術大会シンポジウム
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] "Telescope model” for coordinated organ morphogenesis and stem cell formation2022

    • Author(s)
      森田 梨津子
    • Organizer
      日本遺伝学会第94回札幌大会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 1細胞解析から明らかにする毛包発生と幹細胞誘導のしくみ2022

    • Author(s)
      森田 梨津子
    • Organizer
      シングルセルゲノミクス研究会2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] アクティブマター物理学:集団運動の秩序とゆらぎ2022

    • Author(s)
      西口 大貴
    • Organizer
      第67回物性若手夏の学校
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] アクティブマター物理学:集団運動の秩序, ゆらぎ, 波, かたち2022

    • Author(s)
      西口 大貴
    • Organizer
      流体若手夏の学校2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] ミオシンとフォルミンのクロストークがアクチンストレスファイバーの形成と収縮を制御する2022

    • Author(s)
      西村 有香子
    • Organizer
      第60回日本生物物理学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Live-cell imaging illuminates the dynamic encoding of GPCR signaling2022

    • Author(s)
      青木 一洋
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] p38を介したJNKの阻害による確率的な細胞死2022

    • Author(s)
      青木 一洋
    • Organizer
      第3回 細胞死コロキウム
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Optical control of cell signaling with red/far-red light-responsive optogenetic tools in Caenorhabditis elegans.2022

    • Author(s)
      青木 一洋
    • Organizer
      The 8th IMCR Symposium on Endocrine and Metabolism: Beyond the Frontiers of Endocrinology & Metabolism
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Optical relaxation of actomyosin contractility2022

    • Author(s)
      青木 一洋
    • Organizer
      the 15th Asia Pacific Physics Conference (APPC15)
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Visualization and manipulation of cell cycle regulation by live-cell imaging and optogenetics2022

    • Author(s)
      青木 一洋
    • Organizer
      Cell State Transitions: Approaches, Experimental Systems and Models
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 生細胞イメージングによって見えてきたGPCR シグナル伝達の動的符号化原理2022

    • Author(s)
      青木 一洋
    • Organizer
      第74回日本細胞生物学会大会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Encoding and Decoding Biological Information2022

    • Author(s)
      青木 一洋
    • Organizer
      第10回日仏先端科学(JFFoS)シンポジウム
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 多細胞ダイナミクスや細胞内相分離現象における相互作用法則の探索2022

    • Author(s)
      川口 喬吾
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Interaction rules within multicellular dynamics and biological condensates2022

    • Author(s)
      川口 喬吾
    • Organizer
      第60回 生物物理学会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Chirality in the collective migration of neural progenitors2022

    • Author(s)
      川口 喬吾
    • Organizer
      World Congress of Biomechanics
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Topology and active matter physics in cultured nematic cells2022

    • Author(s)
      川口 喬吾
    • Organizer
      World Congress of Biomechanics
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞間相互作用の異方性とキラリティとアクティブマター2022

    • Author(s)
      川口 喬吾
    • Organizer
      日本細胞生物学会大会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Probing the rules of interaction in biological agents2022

    • Author(s)
      川口 喬吾
    • Organizer
      OIST Workshop: Cells, energetics, and information
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Properties of cell-cell interactions shaping multicellular dynamics2022

    • Author(s)
      川口 喬吾
    • Organizer
      Japan-Singapore Joint Developmental Biology Meeting 2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] On the origin of appetite2022

    • Author(s)
      谷本 拓
    • Organizer
      NIBB新規モデル生物開発共同利用研究ミニシンポジウム「エダアシクラゲを用いた新規刺胞動物モデルの研究基盤構築」
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Regulation of dopamine neurons for proper valuation2022

    • Author(s)
      谷本 拓
    • Organizer
      XXVI International Congress of Entomology
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Scaling and spontaneous symmetry restoring of topological defect dynamics in liquid crystal2022

    • Author(s)
      竹内 一将
    • Organizer
      The 12th Dynamics Days Asia Pacific (DDAP12)
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Kardar-Parisi-Zhang universality class2022

    • Author(s)
      竹内 一将
    • Organizer
      Stat&QuantPhys Autumn School 2022 (SQP2022)
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Bacterial glass2022

    • Author(s)
      竹内 一将
    • Organizer
      The 15th Asia Pacific Physics Conference (APPC15)
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] アクティブマターのガラス転移とバクテリア実験2022

    • Author(s)
      竹内 一将
    • Organizer
      名古屋大学 大学院理学研究科 理学専攻 物理科学領域 談話会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] バクテリア集団のガラス転移2022

    • Author(s)
      竹内 一将
    • Organizer
      非平衡ソフトマター・アモルファス物質の 物性解明への力学的自己組織化からの挑戦
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細菌は自然環境中でどのように動くのか?2022

    • Author(s)
      中根 大介
    • Organizer
      日本微生物生態学会 第35回大会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] マイコプラズマは流れに逆らって宿主表面を動いている?2022

    • Author(s)
      中根 大介
    • Organizer
      第49回日本マイコプラズマ学会学術集会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞内反応拡散波の人工細胞再構成系で探る細胞空間の時空間パターン形成原理2022

    • Author(s)
      藤原 慶
    • Organizer
      定量生物学の会第十回年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 人工細胞内再構成系で探る生化学システムの細胞サイズ効果2022

    • Author(s)
      藤原 慶
    • Organizer
      広島大学健康長寿研究拠点(HiHA)WS「サイズ生物学の探究」
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞を創る研究 (ボトムアップ合成生物学) への誘い2022

    • Author(s)
      藤原 慶
    • Organizer
      TARA Seminar理論合成インシリコ生物学セミナー
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 線虫の機能的全脳イメージング: 神経回路の情報処理の理解を目指して2022

    • Author(s)
      豊島 有
    • Organizer
      UBI meeting
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Analyisis of multiplexed information coding in the nervous system of C. elegans2022

    • Author(s)
      豊島 有
    • Organizer
      第60回日本生物物理学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Imaging and analyzing whole brain activity of C. elegans2022

    • Author(s)
      豊島 有
    • Organizer
      CREST Rising Star seminar
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Molecules and neural network underlying salt preference2022

    • Author(s)
      豊島 有
    • Organizer
      CeNeuro2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] RNA構造変化を蛍光ブリンキングで検出する2022

    • Author(s)
      北村 朗
    • Organizer
      第45回 日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Basics and applications of chromophore-assisted light inactivation (CALI)2022

    • Author(s)
      北村 朗
    • Organizer
      第60回 日本生物物理学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] FRAP法を用いた拡散係数測定―夏休みの自由研究―2022

    • Author(s)
      北村 朗
    • Organizer
      第60回 日本生物物理学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Intracellular structure and function of chaperone RNA2022

    • Author(s)
      北村 朗
    • Organizer
      International Workshop on Fluorescence Methods and Applications 2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 生体分子モーターキネシンのエネルギー論とゆらぎによる加速現象2022

    • Author(s)
      有賀 隆行
    • Organizer
      第10回ソフトマター研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Single-molecule energetics and nonthermal manipulation of molecular motor kinesin2022

    • Author(s)
      有賀 隆行
    • Organizer
      2022 East Asian Single-Molecule Biophysics Symposium (EASMB 2022)
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] アメーバ集団による細胞外建築2022

    • Author(s)
      澤井 哲
    • Organizer
      2022年第83回応用物理学会秋季学術講演会 分科企画シンポジウム 新領域グループ トータルバイオミメティクス研究グループ企画「群知能の新展開 生物・ロボット・材料の創発が生み出す知」
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 細胞性粘菌にみる、組織形成のロジック2022

    • Author(s)
      澤井 哲
    • Organizer
      第30回発達腎研究会 特別講演
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 3D morphogenetic movements in the parallel world2022

    • Author(s)
      澤井 哲
    • Organizer
      The 55th Annual Meeting of the Japanese Society for Developmental Biologists
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] The role of dynamic cohesin looping in chromatin compaction and phase separation2022

    • Author(s)
      笹井 理生
    • Organizer
      The 30th Hot Spring Harbor International Symposium
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Terminal activity of dopamine neurons controls reward signals in the fly2021

    • Author(s)
      谷本 拓
    • Organizer
      大阪大学蛋白質研究所セミナー「多様なドーパミン神経伝達から脳を探る」
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] A three-sphere microswimmer in a structured fluid2021

    • Author(s)
      好村 滋行
    • Organizer
      Xiamen Soft Matter Forum 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 蛍光相関分光測定の展開とタンパク質相互作用解析2021

    • Author(s)
      金城 政孝
    • Organizer
      第17 回バイオオプティクス研究会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 初期胚組織はモルフォゲン勾配のノイズを感知し修復する能力を備えている2021

    • Author(s)
      龝枝 佑紀
    • Organizer
      第59回日本生物物理学会年会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 細菌のドリル戦車2021

    • Author(s)
      中根 大介
    • Organizer
      細菌学会 関東支部会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 微生物はからだの中でかしこく行動するのかな?2021

    • Author(s)
      中根 大介
    • Organizer
      動物行動学会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 細菌のドリル戦車2021

    • Author(s)
      中根 大介
    • Organizer
      エアロ・アクアバイオメカニズム学会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Cellular dynamics of biomolecules2021

    • Author(s)
      金城 政孝
    • Organizer
      Virtual Workshop on Fluorescence Correlation Spectroscopy ( FCS) Dedicated to Prof. Rudolf Rigler on the Occasion of his 85 th Birthday
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 動きの可視化から紐解く原核生物の新しい世界2021

    • Author(s)
      中根 大介
    • Organizer
      Archaea研究会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Motion of molecular motors reflecting rheological properties in cells2021

    • Author(s)
      有賀 隆行
    • Organizer
      The 2nd Joint Meeting of The European Society for Clinical Hemorheology and Microcirculation, The International Society for Clinical Hemorheology, and The International Society of Biorheology
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 『これから一緒に研究する君へ』2021

    • Author(s)
      川口 喬吾
    • Organizer
      脳科学若手の会 関西支部セミナー
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 生物系の多体現象と非平衡物理2021

    • Author(s)
      川口 喬吾
    • Organizer
      東京大学工学部 物理工学科 ワークショップ「物理工学の新展開」
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 確率過程の熱力学におけるエントロピー生成と, 最適化の数理2021

    • Author(s)
      伊藤 創祐
    • Organizer
      The 8th Multi-symposium on Control Systems ワークショップ「次世代システム制御理論にはばたく確率システム理論」
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Development of fluorescent probes for live imaging of cellular states2021

    • Author(s)
      岡田 康志
    • Organizer
      The 11th BRI International Symposium ``From Single Cell to Systems Neuroscience''
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Dynamic scaling of liquid crystal defects: microscopic and macroscopic views2021

    • Author(s)
      竹内 一将
    • Organizer
      Quantized vortices and nonlinear waves (量子渦と非線形波動)
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Repertoire seqと機械学習2021

    • Author(s)
      小林 徹也
    • Organizer
      第5回理論免疫学ワークショップ
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 化学熱力学における情報幾何学とMAPK/ERKシグナル伝達経路への応用2021

    • Author(s)
      伊藤 創祐
    • Organizer
      統計物理と統計科学のセミナー
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 情報幾何学を用いた情報熱力学第二法則の定式化2021

    • Author(s)
      伊藤 創祐
    • Organizer
      大阪大学特別講義AIV「熱力学と情報幾何」セミナー
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 細胞状態のシングルセル解析を目指したライブセルイメージング技術の開発2021

    • Author(s)
      岡田 康志
    • Organizer
      第8回日本腎臓研究会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 液晶実験から非平衡厳密解、そして量子多体系へ2020

    • Author(s)
      竹内 一将
    • Organizer
      物理工学の新展開
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 超解像・一分子イメージングで生きた細胞の中を見る2020

    • Author(s)
      岡田 康志
    • Organizer
      日本量子生命科学会第2回総会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Chiral Dynamics and Boundary Wave of Active Nematic Neural Progenitors2020

    • Author(s)
      川口 喬吾
    • Organizer
      Special Virtual Seminar, The University of Chicago
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Visualization and manipulation of cell signaling and cell fates.2020

    • Author(s)
      青木 一洋
    • Organizer
      Virtual Workshop: Cell State Transitions: Approaches, Experimental Systems and Models
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] リソース理論による量子熱力学 ―非平衡ポテンシャルの存在証明を中心に―2020

    • Author(s)
      沙川 貴大
    • Organizer
      第43回量子情報技術研究会 (QIT43)
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] アクティブネマチック細胞とキラリティ2020

    • Author(s)
      川口 喬吾
    • Organizer
      京都大学 大学院理学研究科 談話会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 生物学における機械学習的アプローチの最先端2020

    • Author(s)
      小林 徹也
    • Organizer
      第43回日本分子生物学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] The projection theorem in information geometry and the entropy production2020

    • Author(s)
      伊藤 創祐
    • Organizer
      RIGOROUS STATISTICAL MECHANICS AND RELATED TOPICS II
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 非平衡系における等式と不等式で探索する分子モーター2020

    • Author(s)
      佐々 真一
    • Organizer
      第10回分子モーター討論会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Comparative Mapping of Migrating Cell Morphology and Phase-Field Modeling2020

    • Author(s)
      澤井 哲
    • Organizer
      JSPS Core-to-Core Program "Establishing International Research Network of Mathematical Oncology"
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Deciphering latent growth mode of cells from cellular lineage trees2020

    • Author(s)
      小林 徹也
    • Organizer
      Establishing International Research Network of Mathematical Oncology
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Microfluidics for dense bacterial populations unveils scale invariance in starving bacteria2020

    • Author(s)
      竹内 一将
    • Organizer
      2020 NCTS Complex Systems Workshop
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Chiral dynamics and boundary wave of active nematic neural progenitors2020

    • Author(s)
      川口 喬吾
    • Organizer
      Informal meeting : Variety and universality of bulk-edge correspondence in topological phases: From solid state physics to transdisciplinary concepts
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 蛍光イメージングを用いた細胞内シグナル伝達系の可視化・定量化・操作2020

    • Author(s)
      青木 一洋
    • Organizer
      NCU Life Science Seminar
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 細胞集団運動のキラリティとトポロジー2020

    • Author(s)
      川口 喬吾
    • Organizer
      東京大学 理学系研究科 生物科学セミナー
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Contact activation of locomotion a defining mode of collective migration in amoebozoa morphogenesis2020

    • Author(s)
      澤井 哲
    • Organizer
      JSDB Online Trial Meeting 2020 Symposium
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 増殖系における個の学習がもつ役割の考察2020

    • Author(s)
      小林 徹也
    • Organizer
      2020年度 日本数理生物学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] メダカ生殖腺に見られる周年リズムの線形回帰解析2020

    • Author(s)
      青木 一洋
    • Organizer
      2020年度日本数理生物学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 獲得免疫系の定量生物学2020

    • Author(s)
      小林 徹也
    • Organizer
      2020年度 日本数理生物学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Information-geometric method to quantify the thermodynamic cost of ERK MAPK activation2020

    • Author(s)
      伊藤 創祐
    • Organizer
      第58回日本生物物理学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 自己組織化による細胞極性形成の1分子粒度シミュレーション2020

    • Author(s)
      松岡 里実
    • Organizer
      第58回日本生物物理学会年会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 高次の固有状態熱化仮説2020

    • Author(s)
      沙川 貴大
    • Organizer
      量子多体系の熱力学 ― 数理の発展と展望
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Development of super-resolution microscopy and its application to the study of axonal transport2020

    • Author(s)
      岡田 康志
    • Organizer
      第43回日本神経科学会大会塚原仲晃記念賞記念講演
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 超解像・一分子イメージングによる生細胞観察2020

    • Author(s)
      岡田 康志
    • Organizer
      第93回日本内分泌学会学術総会YECシンポジウム「新規イメージング技術による生命現象解析」
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Information geometry, several variants of thermodynamic uncertainty relations, and speed limits2020

    • Author(s)
      伊藤 創祐
    • Organizer
      CSH Online Workshop “Stochastic thermodynamics of complex systems”
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] On the existence of a complete thermodynamic potential for quantum many-body systems2020

    • Author(s)
      沙川 貴大
    • Organizer
      CSH Workshop "Stochastic thermodynamics of complex systems"
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 細胞内自己組織化現象の1分子計測に基づく1分子粒度シミュレーション2020

    • Author(s)
      松岡 里実
    • Organizer
      日本化学会第100春季年会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Understanding biological sensing and its optimality2020

    • Author(s)
      小林 徹也
    • Organizer
      Universal Principles in Biological Systems and their Evolution
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] アクティブネマティック細胞とキラリティ2020

    • Author(s)
      川口 喬吾
    • Organizer
      山田研究会「動的過程における右と左」ー非平衡、非対称、非線形が紡ぐ学際研究ー」
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Optogenetics for manipulating cellular functions2020

    • Author(s)
      青木 一洋
    • Organizer
      OIST seminar
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Information processing in cellular systems and the fitness value of information2020

    • Author(s)
      小林 徹也
    • Organizer
      Computational Principles in Active Perception and Reinforcement Learning in the Brain
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] リソース理論によるマクロ熱力学ポテンシャルの存在証明2020

    • Author(s)
      沙川 貴大
    • Organizer
      量子論の諸問題と今後の発展(QMKEK7)
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Thermodynamic resource theory of quantum many-body systems2020

    • Author(s)
      沙川 貴大
    • Organizer
      Mini-Workshop on Quantum System Engineering
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Live cell imaging technologies for single-cell analysis2020

    • Author(s)
      岡田 康志
    • Organizer
      第29回ホットスプリングハーバー国際シンポジウム
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Applying condensed matter concepts to collective cell dynamics and tissues2020

    • Author(s)
      川口 喬吾
    • Organizer
      ASHBi Retreat
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] モルフォゲンを介した組織パターン形成の理解と制御2020

    • Author(s)
      猪股 秀彦
    • Organizer
      脊椎動物の起源を知る研究集会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Collective migration in the parallel world2020

    • Author(s)
      澤井 哲
    • Organizer
      Discussion Meeting on Conflict and Cooperation in Cellular Populations (CCCP 2020)
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] The Fisher information and the entropy production2020

    • Author(s)
      伊藤 創祐
    • Organizer
      Combining Information-theoretic Perspectives on Agency (CIPA)
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 超解像・一分子イメージングで探る軸索輸送の分子機構2020

    • Author(s)
      岡田 康志
    • Organizer
      Brain Club
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] The Chemotactic Response and Motor Function of a Bacterial Flagellar Motor in a Single Cell2020

    • Author(s)
      石島 秋彦
    • Organizer
      2020 Sensory Transduction in Microorganisms Gordon Research Conference
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Crawling morphology and collective migration in amoeboid cells2020

    • Author(s)
      澤井 哲
    • Organizer
      アクティブマター研究会2020 企画公演「Crawling motion」
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 小胞輸送の速度と揺らぎと温度2019

    • Author(s)
      岡田 康志
    • Organizer
      第4回バイオサーモロジーワークショップ
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Thermodynamic resource theory of quantum many-body systems and generalized quantum Stein's Lemma2019

    • Author(s)
      沙川 貴大
    • Organizer
      MINI WORKSHOP ON CLASSICAL AND QUANTUM RESOURCES
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 細胞集団運動の非平衡物理とトポロジー2019

    • Author(s)
      川口 喬吾
    • Organizer
      待兼山コロキウム, 大阪大学
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 超解像顕微鏡法とその限界2019

    • Author(s)
      岡田 康志
    • Organizer
      第61回日本顕微鏡学会九州支部総会・学術講演会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 細胞集団運動とトポロジー2019

    • Author(s)
      川口 喬吾
    • Organizer
      筑波大学物性セミナー
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Quantification and manipulation of cell signaling by live cell imaging2019

    • Author(s)
      青木 一洋
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Mathmatical model-based analysis of morphodynamic spectrum of fast migrating cells2019

    • Author(s)
      澤井 哲
    • Organizer
      第42回日本分子生物学会年会シンポジウム 「計測、数理、制御の三位一体による生命動態の解明-Understanding biodynamics by the trinity of measuring, mathematical, and controlling techniques」
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] マウス着床前発生における細胞数半自動計測法を用いた産仔に繋がる胚の解析2019

    • Author(s)
      小林 徹也
    • Organizer
      第42回日本分子生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Dissecting the Molecular Mechanisms of Axonal Transport through Imaging.2019

    • Author(s)
      岡田 康志
    • Organizer
      The 7th Workshop on physics between Ecole Normale Superleure and University of Tokyo
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 液晶トポロジカル欠陥の三次元ダイナミクス観察2019

    • Author(s)
      竹内 一将
    • Organizer
      さきがけ「トポロジー」領域 第2回領域全体会議
    • Related Report
      2019 Annual Research Report
  • [Presentation] Thermodynamics of information geometry as a generalization of the Glansdorff-Prigogine criterion for stability2019

    • Author(s)
      伊藤 創祐
    • Organizer
      UBI-NanoLSI workshop
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Conformational dynamics of microtubules.2019

    • Author(s)
      岡田 康志
    • Organizer
      Joint UBI-Nano LSI workshop
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Cell segregation by contact directed migration2019

    • Author(s)
      澤井 哲
    • Organizer
      Joint UBI-NanoLSI workshop TRENDS IN MOLECULAR BIOPHYSICS OF LIVING CELLS
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Characterizing complexity of many-body quantum dynamics by higher-order eigenstate thermalization2019

    • Author(s)
      沙川 貴大
    • Organizer
      ICTS Workshop "Thermalization, many-body localization and hydrodynamics"
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 情報から捉える生命現象2019

    • Author(s)
      小林 徹也
    • Organizer
      定量生物学の会 北海道キャラバン 2019
    • Related Report
      2019 Annual Research Report
  • [Presentation] Optical control of cell signaling in human cells, fission yeast, and worms2019

    • Author(s)
      青木 一洋
    • Organizer
      ICSB2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Toward imaging-based epigenome analysis in living cells.2019

    • Author(s)
      岡田 康志
    • Organizer
      4th Symposium for the Inter-University Research Network for Trans-Omics Medicine,
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Optical Control of Cell Signaling by Genetically Encoded PhyB-PIF System2019

    • Author(s)
      青木 一洋
    • Organizer
      Resonance Bio International Symposium
    • Related Report
      2019 Annual Research Report
  • [Presentation] Thermodynamics of information geometry and a generalization of the Glansdorff-Prigogine criterion for stability2019

    • Author(s)
      伊藤 創祐
    • Organizer
      Workshop on Recent Progress in Mathematical and Statistical Physics
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Visualization and manipulation of cell signaling2019

    • Author(s)
      青木 一洋
    • Organizer
      The 2nd NIBB-Princeton Joint Symposium Imaging and Quantitative Biology
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Thermodynamics of information geometry and a generalization of the Glansdorff-Prigogine criterion for stability2019

    • Author(s)
      伊藤 創祐
    • Organizer
      EAJSSP2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Active nematic cells and topology2019

    • Author(s)
      川口 喬吾
    • Organizer
      East Asia Joint Seminars on Statistical Physics
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 細胞内シグナル伝達系の 可視化・定量化から見えてきた 分子夾雑の効果2019

    • Author(s)
      青木 一洋
    • Organizer
      新学術領域「分子夾雑の生命化学」第2回関東シンポジウム
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 細胞集団運動とトポロジー2019

    • Author(s)
      川口 喬吾
    • Organizer
      KUIAS-Heidelberg-RIKEN iTHEMS joint workshop, Kyoto Univ.
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Nonequilibrium properties of multicellular systems2019

    • Author(s)
      川口 喬吾
    • Organizer
      RIKEN Summer School Retreat
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] マクロ非平衡系の揺らぎと秩序形成 & 生命現象との関わり2019

    • Author(s)
      竹内 一将
    • Organizer
      「生命の情報物理学」 第一回領域会議
    • Related Report
      2019 Annual Research Report
  • [Presentation] 神経幹細胞集団運動のキラリティとトポロジカル端状態2019

    • Author(s)
      川口 喬吾
    • Organizer
      IPB seminar
    • Related Report
      2019 Annual Research Report
  • [Presentation] 全反射顕微鏡の理想と現実2019

    • Author(s)
      岡田 康志
    • Organizer
      生物物理学会BPSセミナー
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 情報熱力学、計測科学と生物学2019

    • Author(s)
      岡田 康志
    • Organizer
      生物物理学会総会シンポジウム
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Physical properties of homeostatic and active tissues2019

    • Author(s)
      川口 喬吾
    • Organizer
      The 57th Annual Meeting of the Biophysical Society of Japan
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Novel extracellular fluid mechanism for regulation of secreted proteins in Xenopus laevis.2019

    • Author(s)
      猪股 秀彦
    • Organizer
      The 57th Annual Meeting of the Biophysical Society of Japan
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] sCMOSカメラの性能はどこまで向上したか?2019

    • Author(s)
      岡田 康志
    • Organizer
      生物物理学会BPSセミナー
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Second law and eigenstate thermalization in isolated quantum many-body systems2019

    • Author(s)
      沙川 貴大
    • Organizer
      Fundamental Aspects of Statistical Mechanics and the Emergence of Thermodynamics in Non-Equilibrium Systems
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 遺伝子技術と生細胞イメージングによる内在性分子濃度と解離定数の定量化2019

    • Author(s)
      青木 一洋
    • Organizer
      第60回日本組織細胞化学会総会・学術集会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 細胞ダイバーシティーへの数理的アプローチ2019

    • Author(s)
      小林 徹也
    • Organizer
      第92回日本生化学会大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Thermodynamic interpretation of information geometry and thermodynamic uncertainty relationships2019

    • Author(s)
      伊藤 創祐
    • Organizer
      2nd MBI-UBI Joint Symposium
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 生細胞イメージングによるJNK活性の細胞間不均一性と確率的な細胞死の可視化2019

    • Author(s)
      青木 一洋
    • Organizer
      第92回日本生化学会大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] はいまわる細胞の形態表現空間とデータ駆動解析2019

    • Author(s)
      澤井 哲
    • Organizer
      2019年度日本数理生物学会年会 企画シンポジウム「データに基づく細胞・組織生物学」
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Glansdorff-Prigogineの安定性規準と情報幾何の熱力学2019

    • Author(s)
      伊藤 創祐
    • Organizer
      日本物理学会 2019年 秋季大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 非平衡スケーリング則の物理学:基礎理論と実験的進展2019

    • Author(s)
      竹内 一将
    • Organizer
      立教大学 理学研究科 物理学専攻 集中講義
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 階層をつなぐ視点からダイナミクスを考える。2019

    • Author(s)
      澤井 哲
    • Organizer
      第31回高遠・分子細胞生物学シンポジウム
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 乱流転移に現れる臨界現象、普遍性2019

    • Author(s)
      竹内 一将
    • Organizer
      流体若手夏の学校 2019
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Nonequilibrium physics of collective cell migration and tissue homeostasis2019

    • Author(s)
      川口 喬吾
    • Organizer
      Academia Sinica (seminar)
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] イメージングで細胞の生老病死は理解できるか2019

    • Author(s)
      岡田 康志
    • Organizer
      第1回老化研究セミナー
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 生細胞イメージングによる細胞内シグナル伝達系の可視化、定量化、操作2019

    • Author(s)
      青木 一洋
    • Organizer
      第9回光科学異分野横断萌芽研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] KPZ普遍クラス -厳密解と実験が奏でる非平衡のスケーリング則-2019

    • Author(s)
      竹内 一将
    • Organizer
      第64回 物性若手夏の学校
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Second law and eigenstate thermalization in isolated quantum many-body systems2019

    • Author(s)
      沙川 貴大
    • Organizer
      International Workshop on Quantum Thermodynamics
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Disclination turbulence - from defect dynamics to macroscopic scaling laws -2019

    • Author(s)
      竹内 一将
    • Organizer
      2019 Gordon Conference on Liquid Crystals
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Stochastic thermodynamics and information geometry2019

    • Author(s)
      伊藤 創祐
    • Organizer
      Statphys 27
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 細胞内シグナル伝達系の 可視化、定量化、光操作2019

    • Author(s)
      青木 一洋
    • Organizer
      大阪大学蛋白質研究所セミナー がん研究の新機軸
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 免疫恒常性維持機構への数理的アプローチ2019

    • Author(s)
      小林 徹也
    • Organizer
      細胞ダイバース第四回公開シンポジウム
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Live-cell quantification of endogenous protein interactions by genome editing technique and fluorescence cross-correlation spectroscopy2019

    • Author(s)
      青木 一洋
    • Organizer
      第71回細胞生物学会年次大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 成体組織恒常性の普遍モデルとその性質2019

    • Author(s)
      川口 喬吾
    • Organizer
      第19回日本蛋白質科学会年会 第71回日本細胞生物学会大会 合同年次大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] クロマチン構造転移の統計物理学2019

    • Author(s)
      川口 喬吾
    • Organizer
      新学術領域 クロマチン潜在脳 領域会議
    • Related Report
      2019 Annual Research Report
  • [Presentation] Visualization and manipulation of cell signaling2019

    • Author(s)
      青木 一洋
    • Organizer
      ExCELLS visit talks at Institute of Biological Chemistry, Academia Sinica
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 成体組織恒常性の非平衡物理2019

    • Author(s)
      川口 喬吾
    • Organizer
      北大MMCセミナー
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 神経幹細胞の回転運動と 3次元フローを幾何学的に制御する2019

    • Author(s)
      川口 喬吾
    • Organizer
      新学術領域 3Dモルフォロジック 領域会議
    • Related Report
      2019 Annual Research Report
  • [Presentation] Revisiting Model-A dynamic scaling laws in twisted nematics: phase ordering and critical percolation2019

    • Author(s)
      竹内 一将
    • Organizer
      FSP2019: Frontiers of Statistical Physics
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Observing dynamics of topological defects in liquid crystal: toward understanding their hierarchical structure2019

    • Author(s)
      竹内 一将
    • Organizer
      第二回クラスター階層領域研究会
    • Related Report
      2019 Annual Research Report
  • [Presentation] ライブセルイメージングおよび単一胚移植による産まれる発生パターンの解析2019

    • Author(s)
      小林 徹也
    • Organizer
      有性生殖にかかわる染色体・クロマチン・核動態に関する研究会(遺伝研研究会)
    • Related Report
      2019 Annual Research Report
  • [Presentation] Thermodynamics of information geometry2019

    • Author(s)
      伊藤 創祐
    • Organizer
      Data analysis and machine learning in dynamical systems
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Second law and eigenstate thermalization in isolated quantum many-body systems2019

    • Author(s)
      沙川 貴大
    • Organizer
      Quantum Spins at the Nanoscale
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Super-resolution live-cell imaging 2019: new optics, new dyes, and new algorithms.2019

    • Author(s)
      岡田 康志
    • Organizer
      カナダ顕微鏡学会(MSC-SMC annual meeting) 2019
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Understanding adaptive immune system as reinforcement learning2019

    • Author(s)
      小林 徹也
    • Organizer
      Interface between Immunology & Quantitative Biology
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Live-cell quantification of the concentration and dissociation constant of endogenous proteins by a combination of CRISPR/Cas9 genome editing and FCS/FCCS.2019

    • Author(s)
      青木 一洋
    • Organizer
      Interface between Immunology & Quantitative Biology
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] A physico-chemical modeling and data-driven approach to cell morphology dynamics2019

    • Author(s)
      澤井 哲
    • Organizer
      金沢大学NanoELSI 公開セミナー
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Deciphering morphology landscape of fast migrationg cells by dynamical systems modeling and machine learning2019

    • Author(s)
      澤井 哲
    • Organizer
      A3 workshop for Mathematical Life Science
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Stochastic thermodynamics and information geometry2019

    • Author(s)
      伊藤 創祐
    • Organizer
      Statistical physics of complex systems
    • Related Report
      2019 Annual Research Report
  • [Presentation] Revisiting circular vs flat interfaces and application of variational principle2019

    • Author(s)
      竹内 一将
    • Organizer
      Key Challenges in Statistical Physics
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 生体内での情報と熱の物理法則2019

    • Author(s)
      伊藤 創祐
    • Organizer
      第5回 シンポジウム 「生物物理の新展開」
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 生細胞イメージングにおける超解像光学顕微鏡の現状と課題2019

    • Author(s)
      岡田 康志
    • Organizer
      ナノプローブテクノロジー第167委員会第91回研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] Lecture ‘Microinjection of the embryos (Xenopus session)’2019

    • Author(s)
      猪股 秀彦
    • Organizer
      The 15th Transgenic Technology Meeting
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Book] "タンパク質の時間と通信と自由エネルギー"2022

    • Author(s)
      笹井 理生
    • Publisher
      丸善出版
    • Related Report
      2021 Annual Research Report
  • [Book] "Live cell imaging of the twitching motility of cyanobacteria by high-resolution microscopy (Methods in Molecular Biology)"2022

    • Author(s)
      中根 大介
    • Publisher
      Soringer
    • Related Report
      2021 Annual Research Report
  • [Book] "Swimming motility assays of Spiroplasma (Methods in Molecular Biology)"2022

    • Author(s)
      中根 大介
    • Publisher
      Springer
    • Related Report
      2021 Annual Research Report
  • [Book] "Live cell imaging of gliding motility of Bacteroidetes under high-resolution microscopy (Methods in Molecular Biology)"2022

    • Author(s)
      中根 大介
    • Publisher
      Springer
    • Related Report
      2021 Annual Research Report
  • [Book] "Isolation and visualization of gliding motility machinery in Bacteroidota (Methods in Molecular Biology)"2022

    • Author(s)
      中根 大介
    • Publisher
      Springer
    • Related Report
      2021 Annual Research Report
  • [Book] "別冊・医学のあゆみ 「細胞競合による生体制御とがん」"2021

    • Author(s)
      龝枝 佑紀
    • Publisher
      医歯薬出版
    • Related Report
      2021 Annual Research Report
  • [Book] "相分離 : メカニズムと疾患 : “膜のないオルガネラ"はいかに機能するか? 神経変性疾患・ウイルス感染とどう関わるか?"2021

    • Author(s)
      水野 大介
    • Publisher
      羊土社
    • ISBN
      9784758103954
    • Related Report
      2021 Annual Research Report
  • [Book] "機械学習を生命科学に使う! : シークエンスや画像データをどう解析し、新たな生物学的発見につなげるか?"2020

    • Author(s)
      小林 徹也
    • Publisher
      羊土社
    • ISBN
      9784758103916
    • Related Report
      2020 Annual Research Report
  • [Book] "相分離生物学の全貌"2020

    • Author(s)
      川口 喬吾
    • Publisher
      東京化学同人
    • ISBN
      9784807913466
    • Related Report
      2020 Annual Research Report
  • [Book] "数理科学 2020年11月号 No.689 情報幾何学の探究 基礎と応用,現状と展望に迫る"2020

    • Author(s)
      伊藤 創祐
    • Publisher
      サイエンス社
    • Related Report
      2020 Annual Research Report
  • [Book] "Single Molecule Microscopy in Neurobiology"2020

    • Author(s)
      岡田 康志
    • Publisher
      Springer
    • Related Report
      2020 Annual Research Report
  • [Book] "細胞の理論生物学: ダイナミクスの視点から"2020

    • Author(s)
      澤井 哲
    • Publisher
      東京大学出版会
    • ISBN
      9784130626217
    • Related Report
      2020 Annual Research Report
  • [Book] "物理科学,この1年 2020 (Parity)"2020

    • Author(s)
      川口 喬吾
    • Publisher
      丸善出版
    • ISBN
      9784621304860
    • Related Report
      2019 Annual Research Report
  • [Book] "物理科学, この1年 2020 (Parity)"2020

    • Author(s)
      岡田 康志
    • Publisher
      丸善出版
    • ISBN
      4621304860
    • Related Report
      2019 Annual Research Report
  • [Remarks] 情報物理学でひもとく生命の秩序と設計原理

    • URL

      https://infophys-bio.jp/

    • Related Report
      2019 Annual Research Report

URL: 

Published: 2019-07-04   Modified: 2024-12-25  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi