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ゼニゴケ油体をモデルとしたオルガネラ周期の証明と中心因子の同定

Planned Research

Project AreaIntrinsic periodicity of cellular systems and its modulation as the driving force behind plant development
Project/Area Number 19H05675
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionNational Institute for Basic Biology

Principal Investigator

上田 貴志  基礎生物学研究所, 細胞動態研究部門, 教授 (10311333)

Co-Investigator(Kenkyū-buntansha) 近藤 洋平  大学共同利用機関法人自然科学研究機構(機構直轄研究施設), 生命創成探究センター, 助教 (00724444)
河内 孝之  京都大学, 生命科学研究科, 教授 (40202056)
金澤 建彦  基礎生物学研究所, 細胞動態研究部門, 助教 (60802783)
Project Period (FY) 2019-06-28 – 2024-03-31
Project Status Granted (Fiscal Year 2023)
Budget Amount *help
¥169,910,000 (Direct Cost: ¥130,700,000、Indirect Cost: ¥39,210,000)
Fiscal Year 2023: ¥34,710,000 (Direct Cost: ¥26,700,000、Indirect Cost: ¥8,010,000)
Fiscal Year 2022: ¥34,710,000 (Direct Cost: ¥26,700,000、Indirect Cost: ¥8,010,000)
Fiscal Year 2021: ¥32,760,000 (Direct Cost: ¥25,200,000、Indirect Cost: ¥7,560,000)
Fiscal Year 2020: ¥32,760,000 (Direct Cost: ¥25,200,000、Indirect Cost: ¥7,560,000)
Fiscal Year 2019: ¥34,970,000 (Direct Cost: ¥26,900,000、Indirect Cost: ¥8,070,000)
Keywordsゼニゴケ / 油体周期 / イメージング / トランスクリプトーム / 油体 / 分泌経路 / 膜交通 / 微小管 / オルガネラ周期
Outline of Research at the Start

油体周期をオルガネラ周期のモデルとし,油体形成過程の高精細ライブイメージングと画像解析に一細胞トランスクリプトーム解析を組み合わせ,油体周期の各相を分離することで油体周期の実態を明らかにする.また,生体分子ダイナミクス解析により油体周期の中心振動子を推定するとともに,その分子機能を実験的に検証する.続いて環境変動を与えた際の油体周期の変調が油体の分布パターンの変化として表出する仕組みを解明する.

Outline of Annual Research Achievements

油体周期の発振機構に迫るべく、油体形成パターンや油体形態が異常になる変異体の単離と解析を進めた。まず油体細胞の数が減少する変異体について原因遺伝子の探索を行い、グルタレドキシンをコードする遺伝子の発現上昇が油体細胞数の減少を引き起こすことを突き止めた。同様の影響が複数のアリルで観察されることから、グルタレドキシンによる酸化還元状態の制御が、油体細胞分化のマスター制御因子であるERF13の発現調節につながる可能性がある。
野生型のゼニゴケでは凹凸のある複雑な形を呈する油体が、真球に近い形になる複数の変異体の解析も進めた。そのうちの一つは、ゴルジ体からの逆行輸送に関わるCOPI被覆複合体のサブユニット(MpSEC28)をコードする遺伝子の機能が失われており、COPIの他のサブユニットのノックダウンも油体形態に同様の影響を与えたことから、油体の正常な形成にゴルジ体を経由する分泌経路が重要な役割を果たしていることが示された。類似の表現型を示すspherical oil body 1 (sho1) 変異体についても解析を進め、この変異がS10ファミリーに分類されるセリンカルボキシペプチダーゼ様(SCPL)タンパク質の欠失によることを突き止めた。MpSHO1の細胞内局在を調べたところ、液胞への局在が強く示唆されたことから、油体形成と液胞機能には、何らかの未知の関連があると考えられる。
ゼニゴケのオルガネラ機能とその制御に関連し、精子変態時のオルガネラ再編成の様子を詳細に記述するとともに、その仕組みの解析も進めた。精子変態時のオルガネラ再編成にオートファジーが必須の役割を担うことを明らかにするとともに、エンドサイトーシス経路で膜タンパク質の分解に関わるESCRT複合体の機能が正常な精子変態に必須であることも明らかにした。

Current Status of Research Progress
Current Status of Research Progress

2: Research has progressed on the whole more than it was originally planned.

Reason

単一核トランスクリプトーム解析の条件設定に遅れはあるものの、研究全体としては概ね計画通りに進展している。

Strategy for Future Research Activity

オルガネラや細胞の周期的な振る舞いとその分子機構を明らかにするべく引き続き研究を推進する。油体細胞の一細胞トランスクリプトーム解析を進めるとともに、油体形成が異常になる変異体の解析や、シロイヌナズナのオルガネラ機能発現機構の解析を並行して進める。

Report

(4 results)
  • 2022 Annual Research Report
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • Research Products

    (102 results)

All 2024 2023 2022 2021 2020 2019 Other

All Int'l Joint Research (10 results) Journal Article (80 results) (of which Int'l Joint Research: 32 results,  Peer Reviewed: 76 results,  Open Access: 49 results) Presentation (12 results) (of which Int'l Joint Research: 9 results,  Invited: 10 results)

  • [Int'l Joint Research] MPI for Plant Breeding Research(ドイツ)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] Heidelberg University/Ludwig-Maximilians-University (LMU)/University of Hohenheim(ドイツ)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] Universidad Nacional del Litoral(アルゼンチン)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] Monash University(オーストラリア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] University of Bristol(英国)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] Gregor Mendel Institute(オーストリア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] Monash University/The University of Melbourne(オーストラリア)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] Heidelberg University/Max Planck Institute/Osnabruck University(ドイツ)

    • Related Report
      2019 Annual Research Report
  • [Int'l Joint Research] Universidad Nacional del Litoral(アルゼンチン)

    • Related Report
      2019 Annual Research Report
  • [Journal Article] Microtubule-associated phase separation of MIDD1 tunes cell wall spacing in xylem vessels in Arabidopsis thaliana2024

    • Author(s)
      Higa Takeshi、Kijima Saku T.、Sasaki Takema、Takatani Shogo、Asano Ryosuke、Kondo Yohei、Wakazaki Mayumi、Sato Mayuko、Toyooka Kiminori、Demura Taku、Fukuda Hiroo、Oda Yoshihisa
    • Journal Title

      Nature Plants

      Volume: 10 Issue: 1 Pages: 100-117

    • DOI

      10.1038/s41477-023-01593-9

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The phosphorylated pathway of serine biosynthesis affects sperm, embryo, and sporophyte development, and metabolism in Marchantia polymorpha2024

    • Author(s)
      Wang M., Tabeta H., Ohtaka K., Kuwahara A., Nishihama R., Ishikawa T., Toyooka K., Sato M., Wakazaki M., Akashi H., Tsugawa H., Shoji T., Okazaki Y., Yoshida K., Sato R., Ferjani A., Kohchi T., Hirai M.Y.
    • Journal Title

      Commun. Biol.

      Volume: 7 Issue: 1 Pages: 102-102

    • DOI

      10.1038/s42003-023-05746-6

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] RAF-like protein kinases mediate a deeply conserved, rapid auxin response2024

    • Author(s)
      Kuhn Andre、Roosjen Mark、Mutte Sumanth、Dubey Shiv Mani、Carrillo Carrasco Vanessa Polet、Boeren Sjef、Monzer Aline、Koehorst Jasper、Kohchi Takayuki、Nishihama Ryuichi、Fendrych Matyas、Sprakel Joris、Friml Jiri、Weijers Dolf
    • Journal Title

      Cell

      Volume: 187 Issue: 1 Pages: 130-148.e17

    • DOI

      10.1016/j.cell.2023.11.021

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Conserved CKI1-mediated signaling is required for female germline specification in Marchantia polymorpha2024

    • Author(s)
      Bao Haonan、Sun Rui、Iwano Megumi、Yoshitake Yoshihiro、Aki Shiori S.、Umeda Masaaki、Nishihama Ryuichi、Yamaoka Shohei、Kohchi Takayuki
    • Journal Title

      Current Biology

      Volume: 34 Issue: 6 Pages: 1324-1332

    • DOI

      10.1016/j.cub.2024.01.013

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Autophagy regulates plastid reorganization during spermatogenesis in the liverwort Marchantia polymorpha2023

    • Author(s)
      Norizuki Takuya、Minamino Naoki、Sato Miyuki、Ueda Takashi
    • Journal Title

      Frontiers in Plant Science

      Volume: 14 Pages: 1-8

    • DOI

      10.3389/fpls.2023.1101983

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 力学系を組み込んだ変分自己符号化器による顕微鏡動画モデリング:ゼニゴケ精子の運動を例として2023

    • Author(s)
      近藤洋平、南野尚紀、上田貴志
    • Journal Title

      統計数理

      Volume: 71 Pages: 149-158

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] LysM-mediated signaling in Marchantia polymorpha highlights the conservation of pattern-triggered immunity in land plants2023

    • Author(s)
      Yotsui Izumi ..., Takashi Ueda (22人中20番目)...
    • Journal Title

      Current Biology

      Volume: 33 Issue: 17 Pages: 3732-3746.e8

    • DOI

      10.1016/j.cub.2023.07.068

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The SYP123-VAMP727 SNARE complex delivers secondary cell wall components for root hair shank hardening in Arabidopsis2023

    • Author(s)
      Hirano Tomoko、Ebine Kazuo、Ueda Takashi、Higaki Takumi、Watanabe-Nakayama Takahiro、Konno Hiroki、Takigawa-Imamura Hisako、Sato Masa H
    • Journal Title

      The Plant Cell

      Volume: 35 Issue: 12 Pages: 4347-4365

    • DOI

      10.1093/plcell/koad240

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Harnessing Deep Learning to Analyze Cryptic Morphological Variability of Marchantia polymorpha2023

    • Author(s)
      Tomizawa Yoko、Minamino Naoki、Shimokawa Eita、Kawamura Shogo、Komatsu Aino、Hiwatashi Takuma、Nishihama Ryuichi、Ueda Takashi、Kohchi Takayuki、Kondo Yohei
    • Journal Title

      Plant and Cell Physiology

      Volume: 64 Issue: 11 Pages: 1343-1355

    • DOI

      10.1093/pcp/pcad117

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Analysis of Plant-Specific ANTH Domain Containing Protein in Marchantia polymorpha2023

    • Author(s)
      Minamino Naoki、Fujii Haruki、Murata Haruhiko、Hachinoda Sho、Kondo Yohei、Hotta Kazuhiro、Ueda Takashi
    • Journal Title

      Plant And Cell Physiology

      Volume: 64 Issue: 11 Pages: 1331-1342

    • DOI

      10.1093/pcp/pcad118

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Vacuoles2023

    • Author(s)
      Ebine Kazuo、Ueda Takashi
    • Journal Title

      Encyclopedia of Cell Biology

      Volume: Second Edition Pages: 426-434

    • DOI

      10.1016/b978-0-12-821618-7.00154-1

    • ISBN
      9780128216248
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Circadian Clock Controls Root Hair Elongation through Long-Distance Communication2023

    • Author(s)
      Ikeda Hikari、Uchikawa Taiga、Kondo Yohei、Takahashi Nozomu、Shishikui Takuma、Watahiki Masaaki K、Kubota Akane、Endo Motomu
    • Journal Title

      Plant And Cell Physiology

      Volume: 64 Issue: 11 Pages: 1289-1300

    • DOI

      10.1093/pcp/pcad076

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] In-Depth Quantification of Cell Division and Elongation Dynamics at the Tip of Growing Arabidopsis Roots Using 4D Microscopy, AI-Assisted Image Processing and Data Sonification2023

    • Author(s)
      Goh Tatsuaki、Song Yu、Yonekura Takaaki、Obushi Noriyasu、Den Zeping、Imizu Katsutoshi、Tomizawa Yoko、Kondo Yohei、Miyashima Shunsuke、Iwamoto Yutaro、Inami Masahiko、Chen Yen-Wei、Nakajima Keiji
    • Journal Title

      Plant And Cell Physiology

      Volume: 64 Issue: 11 Pages: 1262-1278

    • DOI

      10.1093/pcp/pcad105

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Stomatal regulators are co-opted for seta development in the astomatous liverwort Marchantia polymorpha2023

    • Author(s)
      Moriya Kenta C.、Shirakawa Makoto、Loue-Manifel Jeanne、Matsuda Yoriko、Lu Yen-Ting、Tamura Kentaro、Oka Yoshito、Matsushita Tomonao、Hara-Nishimura Ikuko、Ingram Gwyneth、Nishihama Ryuichi、Goodrich Justin、Kohchi Takayuki、Shimada Tomoo
    • Journal Title

      Nature Plants

      Volume: 9 Issue: 2 Pages: 302-314

    • DOI

      10.1038/s41477-022-01325-5

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Three-Dimensional Morphological Analysis Revealed the Cell Patterning Bases for?the Sexual Dimorphism Development in?the Liverwort <i>Marchantia polymorpha</i>2023

    • Author(s)
      Cui Yihui、Hisanaga Tetsuya、Kajiwara Tomoaki、Yamaoka Shohei、Kohchi Takayuki、Goh Tatsuaki、Nakajima Keiji
    • Journal Title

      Plant And Cell Physiology

      Volume: 64 Issue: 8 Pages: 866-879

    • DOI

      10.1093/pcp/pcad048

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Biosynthesis of gibberellin-related compounds modulates far-red light responses in the liverwort Marchantia polymorpha2023

    • Author(s)
      Sun Rui、Okabe Maiko、Miyazaki Sho、Ishida Toshiaki、Mashiguchi Kiyoshi、Inoue Keisuke、Yoshitake Yoshihiro、Yamaoka Shohei、Nishihama Ryuichi、Kawaide Hiroshi、Nakajima Masatoshi、Yamaguchi Shinjiro、Kohchi Takayuki
    • Journal Title

      The Plant Cell

      Volume: 35 Issue: 11 Pages: 4111-4132

    • DOI

      10.1093/plcell/koad216

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A bHLH heterodimer regulates germ cell differentiation in land plant gametophytes2023

    • Author(s)
      Saito Misaki、Momiki Ryosuke、Ebine Kazuo、Yoshitake Yoshihiro、Nishihama Ryuichi、Miyakawa Takuya、Nakano Takeshi、Mitsuda Nobutaka、Araki Takashi、Kohchi Takayuki、Yamaoka Shohei
    • Journal Title

      Current Biology

      Volume: 33 Issue: 22 Pages: 4980-4987.e6

    • DOI

      10.1016/j.cub.2023.09.020

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CRISPR/Cas9-mediated disruption of <i>ALLENE OXIDE SYNTHASE</i> results in defective 12-oxo-phytodienoic acid accumulation and reduced defense against spider mite (<i>Tetranychus urticae</i>) in liverwort (<i>Marchantia polymorpha</i>)2022

    • Author(s)
      Koeduka, T., Takaishi, M., Suzuki, M., Nishihama, R., Kohchi, T., Uefune, M., and Matsui, K.
    • Journal Title

      Plant Biotechnology

      Volume: 39 Issue: 2 Pages: 191-194

    • DOI

      10.5511/plantbiotechnology.22.0328a

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2022-06-25
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Migration of prospindle before the first asymmetric division in germinating spore of <i>Marchantia polymorpha</i>2022

    • Author(s)
      Sakai Yuuki、Higaki Takumi、Ishizaki Kimitsune、Nishihama Ryuichi、Kohchi Takayuki、Hasezawa Seiichiro
    • Journal Title

      Plant Biotechnology

      Volume: 39 Issue: 1 Pages: 5-12

    • DOI

      10.5511/plantbiotechnology.21.1217b

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2022-03-25
    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A glycogen synthase kinase 3-like kinase MpGSK regulates cell differentiation in <i>Marchantia polymorpha</i>2022

    • Author(s)
      Furuya Tomoyuki、Nishihama Ryuichi、Ishizaki Kimitsune、Kohchi Takayuki、Fukuda Hiroo、Kondo Yuki
    • Journal Title

      Plant Biotechnology

      Volume: 39 Issue: 1 Pages: 65-72

    • DOI

      10.5511/plantbiotechnology.21.1219a

    • NAID

      130008161270

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2022-03-25
    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Dynamic rearrangement and autophagic degradation of mitochondria during spermiogenesis in the liverwort Marchantia polymorpha2022

    • Author(s)
      Norizuki Takuya、Minamino Naoki、Sato Miyuki、Tsukaya Hirokazu、Ueda Takashi
    • Journal Title

      Cell Reports

      Volume: 39 Issue: 11 Pages: 110975-110975

    • DOI

      10.1016/j.celrep.2022.110975

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phylogenetic distribution and expression pattern analyses identified a divergent basal body assembly protein involved in land plant spermatogenesis2022

    • Author(s)
      Koshimizu Shizuka、Minamino Naoki、Nishiyama Tomoaki、Yoro Emiko、Sato Mayuko、Wakazaki Mayumi、Toyooka Kiminori、Ebine Kazuo、Sakakibara Keiko、Ueda Takashi、Yano Kentaro
    • Journal Title

      New Phytologist

      Volume: 236 Issue: 3 Pages: 1182-1196

    • DOI

      10.1111/nph.18385

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Remodeling of organelles and microtubules during spermiogenesis in the liverwort Marchantia polymorpha2022

    • Author(s)
      Minamino Naoki、Norizuki Takuya、Mano Shoji、Ebine Kazuo、Ueda Takashi
    • Journal Title

      Development

      Volume: 149 Issue: 15 Pages: 1-14

    • DOI

      10.1242/dev.200951

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Normal oil body formation in Marchantia polymorpha requires functional coat protein complex I proteins2022

    • Author(s)
      Kanazawa T, Nishihama R, Ueda T
    • Journal Title

      Frontiers in Plant Science

      Volume: 13 Pages: 979066-979066

    • DOI

      10.3389/fpls.2022.979066

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Autophagy regulates organelle reorganization during spermiogenesis in the liverwort Marchantia polymorpha2022

    • Author(s)
      Norizuki Takuya、Ueda Takashi
    • Journal Title

      Autophagy

      Volume: 18 Issue: 10 Pages: 2503-2504

    • DOI

      10.1080/15548627.2022.2096396

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Renaissance and Enlightenment of Marchantia as a model system2022

    • Author(s)
      Bowman, J.L., Berger,F., Briginshaw, L.N., Davies, K.M., Dierschke, T., Dolan,L., Fisher, T.J., Flores-Sandoval,E., Futagami,K., Ishizaki, K., Kato, H., Kohchi, T., Levins, J., Lin, S-S., Nishihama, R., Romani, R., Tanizawa, Y., Tsuzuki, M., Watanabe,Y., Yamato, K.T., Zachgo, S.
    • Journal Title

      The Plant Cell

      Volume: 34 Issue: 10 Pages: 3512-3542

    • DOI

      10.1093/plcell/koac219

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Membrane trafficking functions of the ANTH/ENTH/VHS domain‐containing proteins in plants2022

    • Author(s)
      Feng Yihong、Hiwatashi Takuma、Minamino Naoki、Ebine Kazuo、Ueda Takashi
    • Journal Title

      FEBS Letters

      Volume: 596 Issue: 17 Pages: 2256-2268

    • DOI

      10.1002/1873-3468.14368

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantitative live-cell imaging of GPCR downstream signaling dynamics2022

    • Author(s)
      Tany Ryosuke、Goto Yuhei、Kondo Yohei、Aoki Kazuhiro
    • Journal Title

      Biochemical Journal

      Volume: 479 Issue: 8 Pages: 883-900

    • DOI

      10.1042/bcj20220021

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Contribution of Polar Actomyosin during Cytokinesis Revealed by Optogenetic Control of Myosin Activity2022

    • Author(s)
      山本 啓, 近藤 洋平
    • Journal Title

      Seibutsu Butsuri

      Volume: 62 Issue: 5 Pages: 285-287

    • DOI

      10.2142/biophys.62.285

    • ISSN
      0582-4052, 1347-4219
    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Distinct Functions of the Atypical Terminal Hydrophilic Domain of the HKT Transporter in the Liverwort Marchantia polymorpha.2022

    • Author(s)
      Imran S, Oyama M, Horie R, Kobayashi NI, Costa A, Kumano R, Hirata C, Tran STH, Katsuhara M, Tanoi K, Kohchi K, Ishizaki K, Horie T.
    • Journal Title

      Plant Cell Physiology

      Volume: 63 Issue: 6 Pages: 802816-802816

    • DOI

      10.1093/pcp/pcac044

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Protein Kinase MpYAK1 Is Involved in Meristematic Cell Proliferation, Reproductive Phase Change and Nutrient Signaling in the Liverwort Marchantia polymorpha2022

    • Author(s)
      Haruka Shinkawa; Masataka Kajikawa; Tomoyuki Furuya; Ryuichi Nishihama; Hirokazu Tsukaya; Takayuki Kohchi; Hideya Fukuzawa
    • Journal Title

      Plant and Cell Physiology

      Volume: 63 Issue: 8 Pages: 1063-1077

    • DOI

      10.1093/pcp/pcac076

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] MarpolBase Expression: A Web-Based, Comprehensive Platform for Visualization and Analysis of Transcriptomes in the Liverwort <i>Marchantia polymorpha</i>2022

    • Author(s)
      Kawamura Shogo、Romani Facundo、Yagura Masaru、Mochizuki Takako、Sakamoto Mika、Yamaoka Shohei、Nishihama Ryuichi、Nakamura Yasukazu、Yamato Katsuyuki T、Bowman John L、Kohchi Takayuki、Tanizawa Yasuhiro
    • Journal Title

      Plant and Cell Physiology

      Volume: 63 Issue: 11 Pages: 1745-1755

    • DOI

      10.1093/pcp/pcac129

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] R2R3-MYB transcription factor GEMMA CUP-ASSOCIATED MYB1 mediates the cytokinin signal to achieve proper organ development in Marchantia polymorpha2022

    • Author(s)
      Aki Shiori S.、Morimoto Tomoyo、Ohnishi Taiki、Oda Ayumi、Kato Hirotaka、Ishizaki Kimitsune、Nishihama Ryuichi、Kohchi Takayuki、Umeda Masaaki
    • Journal Title

      Scientific Reports

      Volume: 12 Issue: 1 Pages: 21123-21123

    • DOI

      10.1038/s41598-022-25684-3

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Auxin signaling is essential for organogenesis but not for cell survival in the liverwort<i>Marchantia polymorpha</i>2022

    • Author(s)
      Suzuki Hidemasa、Kato Hirotaka、Iwano Megumi、Nishihama Ryuichi、Kohchi Takayuki
    • Journal Title

      The Plant Cell

      Volume: 35 Issue: 3 Pages: 1058-1075

    • DOI

      10.1093/plcell/koac367

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] コケ植物の性決定システムと生存戦略2022

    • Author(s)
      大和勝幸、河内孝之
    • Journal Title

      生物の科学 遺伝

      Volume: 76 Pages: 213-219

    • Related Report
      2022 Annual Research Report
  • [Journal Article] Improved clearing method contributes to deep imaging of plant organs2022

    • Author(s)
      Sakamoto Yuki、Ishimoto Anna、Sakai Yuuki、Sato Moeko、Nishihama Ryuichi、Abe Konami、Sano Yoshitake、Furuichi Teiichi、Tsuji Hiroyuki、Kohchi Takayuki、Matsunaga Sachihiro
    • Journal Title

      Communications Biology

      Volume: 5 Issue: 1 Pages: 12-12

    • DOI

      10.1038/s42003-021-02955-9

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Diminished Auxin Signaling Triggers Cellular Reprogramming by Inducing a Regeneration Factor in the Liverwort <i>Marchantia polymorpha</i>2022

    • Author(s)
      Ishida Sakiko、Suzuki Hidemasa、Iwaki Aya、Kawamura Shogo、Yamaoka Shohei、Kojima Mikiko、Takebayashi Yumiko、Yamaguchi Katsushi、Shigenobu Shuji、Sakakibara Hitoshi、Kohchi Takayuki、Nishihama Ryuichi
    • Journal Title

      Plant and Cell Physiology

      Volume: 63 Issue: 3 Pages: 384-400

    • DOI

      10.1093/pcp/pcac004

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] LIM Tracker: a software package for cell tracking and analysis with advanced interactivity2022

    • Author(s)
      Aragaki Hideya、Ogoh Katsunori、Kondo Yohei、Aoki Kazuhiro
    • Journal Title

      Scientific Reports

      Volume: 12 Issue: 1 Pages: 2702-2702

    • DOI

      10.1038/s41598-022-06269-6

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] コケ植物の性決定システムと生存戦略2022

    • Author(s)
      大和勝幸、河内孝之
    • Journal Title

      生物の科学 遺伝

      Volume: 76 Pages: 213-219

    • Related Report
      2021 Annual Research Report
  • [Journal Article] コケ植物を活かす2022

    • Author(s)
      河内孝之
    • Journal Title

      アグリバイオ

      Volume: 7 Pages: 198-199

    • Related Report
      2021 Annual Research Report
  • [Journal Article] 深層学習の植物画像解析への応用2022

    • Author(s)
      藤井春樹、田中隼人、池内桃子、南野尚紀、上田貴志、近藤洋平、堀田一弘
    • Journal Title

      アグリバイオ

      Volume: 6 Pages: 38-43

    • Related Report
      2021 Annual Research Report
  • [Journal Article] Identification of genes involved in <i>Meloidogyne incognita</i>-induced gall formation processes in <i>Arabidopsis thaliana</i>2021

    • Author(s)
      Suzuki Reira、Ueda Takashi、Wada Takuji、Ito Masaki、Ishida Takashi、Sawa Shinichiro
    • Journal Title

      Plant Biotechnology

      Volume: 38 Issue: 1 Pages: 1-8

    • DOI

      10.5511/plantbiotechnology.20.0716a

    • NAID

      130008002844

    • ISSN
      1342-4580, 1347-6114
    • Year and Date
      2021-03-25
    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Fungal-Type Terpene Synthases in Marchantia polymorpha Are Involved in Sesquiterpene Biosynthesis in Oil Body Cells2021

    • Author(s)
      Takizawa Ryosuke、Hatada Miki、Moriwaki Yuta、Abe Sachika、Yamashita Yuko、Arimitsu Ryoma、Yamato Katsuyuki T、Nishihama Ryuichi、Kohchi Takayuki、Koeduka Takao、Chen Feng、Matsui Kenji
    • Journal Title

      Plant and Cell Physiology

      Volume: - Issue: 3 Pages: 528-537

    • DOI

      10.1093/pcp/pcaa175

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Major components of the KARRIKIN INSENSITIVE2-dependent signaling pathway are conserved in the liverwort Marchantia polymorpha2021

    • Author(s)
      Mizuno Y, Komatsu A, Shimazaki S, Naramoto S, Inoue K, Xie X, Ishizaki K, Kohchi T, Kyozuka J.
    • Journal Title

      Plant Cell

      Volume: - Issue: 7 Pages: 112-156

    • DOI

      10.1093/plcell/koab106

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Coordination between growth and stress responses by DELLA in the liverwort Marchantia polymorpha2021

    • Author(s)
      Hernandez-Garcia Jorge、Sun Rui、Serrano-Mislata Antonio、Inoue Keisuke、Vargas-Chavez Carlos、Esteve-Bruna David、Arbona Vicent、Yamaoka Shohei、Nishihama Ryuichi、Kohchi Takayuki、Blazquez Miguel A.
    • Journal Title

      Current Biology

      Volume: 31 Issue: 16 Pages: 3678-3686.e11

    • DOI

      10.1016/j.cub.2021.06.010

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A plant-specific DYRK kinase DYRKP coordinates cell morphology in Marchantia polymorpha.2021

    • Author(s)
      Furuya T; Shinkawa H; Kajikawa M; Nishihama R; Kohchi T; Fukuzawa H; Tsukaya H
    • Journal Title

      Journal of plant research

      Volume: 134 Issue: 6 Pages: 1265-1277

    • DOI

      10.1007/s10265-021-01345-w

    • NAID

      40022725207

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Deep evolutionary origin of gamete-directed zygote activation by KNOX/BELL transcription factors in green plants2021

    • Author(s)
      Hisanaga Tetsuya、Fujimoto Shota、Cui Yihui、Sato Katsutoshi、Sano Ryosuke、Yamaoka Shohei、Kohchi Takayuki、Berger Fr?d?ric、Nakajima Keiji
    • Journal Title

      eLife

      Volume: 10

    • DOI

      10.7554/elife.57090

    • NAID

      120007153088

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Identification of the sex-determining factor in the liverwort Marchantia polymorpha reveals unique evolution of sex chromosomes in a haploid system2021

    • Author(s)
      Miyuki Iwasaki Katsuyuki T. Yamato John L. Bowman Takayuki Kohchi et al
    • Journal Title

      Current Biology

      Volume: 31 Issue: 24 Pages: 5522-5532.e7

    • DOI

      10.1016/j.cub.2021.10.023

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Development and Molecular Genetics of Marchantia polymorpha.2021

    • Author(s)
      Kohchi T, Yamato KY, Ishizaki K, Yamaoka S, Nishihama R.
    • Journal Title

      Annu. Rev. Plant Biol.

      Volume: 72 Issue: 1 Pages: 677-702

    • DOI

      10.1146/annurev-arplant-082520-094256

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Temperature-dependent fasciation mutants provide a link between mitochondrial RNA processing and lateral root morphogenesis2021

    • Author(s)
      Otsuka Kurataka、Mamiya Akihito、Konishi Mineko、Nozaki Mamoru、Kinoshita Atsuko、Tamaki Hiroaki、Arita Masaki、Saito Masato、Yamamoto Kayoko、Hachiya Takushi、Noguchi Ko、Ueda Takashi、Yagi Yusuke、Kobayashi Takehito、Nakamura Takahiro、Sato Yasushi、Hirayama Takashi、Sugiyama Munetaka
    • Journal Title

      eLife

      Volume: 10

    • DOI

      10.7554/elife.61611

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cargo sorting zones in the trans-Golgi network visualized by super-resolution confocal live imaging microscopy in plants2021

    • Author(s)
      Shimizu Yutaro、Takagi Junpei、Ito Emi、Ito Yoko、Ebine Kazuo、Komatsu Yamato、Goto Yumi、Sato Mayuko、Toyooka Kiminori、Ueda Takashi、Kurokawa Kazuo、Uemura Tomohiro、Nakano Akihiko
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 1901-1901

    • DOI

      10.1038/s41467-021-22267-0

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Optogenetic relaxation of actomyosin contractility uncovers mechanistic roles of cortical tension during cytokinesis2021

    • Author(s)
      Yamamoto Kei、Miura Haruko、Ishida Motohiko、Mii Yusuke、Kinoshita Noriyuki、Takada Shinji、Ueno Naoto、Sawai Satoshi、Kondo Yohei、Aoki Kazuhiro
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 1-13

    • DOI

      10.1038/s41467-021-27458-3

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Near-infrared imaging in fission yeast using a genetically encoded phycocyanobilin biosynthesis system2021

    • Author(s)
      Sakai Keiichiro、Kondo Yohei、Fujioka Hiroyoshi、Kamiya Mako、Aoki Kazuhiro、Goto Yuhei
    • Journal Title

      Journal of Cell Science

      Volume: 134 Issue: 24 Pages: 1-15

    • DOI

      10.1242/jcs.259315

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Visualization and Manipulation of Intracellular Signaling2021

    • Author(s)
      Goto Yuhei、Kondo Yohei、Aoki Kazuhiro
    • Journal Title

      Adv Exp Med Biol.

      Volume: 1 Pages: 225-234

    • DOI

      10.1007/978-981-15-8763-4_13

    • ISBN
      9789811587627, 9789811587634
    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Hierarchical modeling of mechano-chemical dynamics of epithelial sheets across cells and tissue2021

    • Author(s)
      Asakura Yoshifumi、Kondo Yohei、Aoki Kazuhiro、Naoki Honda
    • Journal Title

      Scientific Reports

      Volume: 11 Issue: 1 Pages: 4069-4069

    • DOI

      10.1038/s41598-021-83396-6

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Oil Body Formation in Marchantia polymorpha Is Controlled by MpC1HDZ and Serves as a Defense against Arthropod Herbivores2020

    • Author(s)
      Romani F., Banic E., Florent S.N., Kanazawa T., Goodger J.Q.D., Mentink R.A., Dierschke T., Zachgo S., Ueda T., Bowman J.L., Tsiantis M., Moreno J.E.
    • Journal Title

      Current Biology

      Volume: 30 Issue: 14 Pages: 2815-2828.e8

    • DOI

      10.1016/j.cub.2020.05.081

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Characterization of ancestral myosin XI from Marchantia polymorpha by heterologous expression in Arabidopsis thaliana2020

    • Author(s)
      Duan Zhongrui、Tanaka Misato、Kanazawa Takehiko、Haraguchi Takeshi、Takyu Akiko、Era Atsuko、Ueda Takashi、Ito Kohji、Tominaga Motoki
    • Journal Title

      The Plant Journal

      Volume: 104 Issue: 2 Pages: 460-473

    • DOI

      10.1111/tpj.14937

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Longin R-SNARE is retrieved from the plasma membrane by ANTH domain-containing proteins in Arabidopsis2020

    • Author(s)
      Fujimoto Masaru、Ebine Kazuo、Nishimura Kohji、Tsutsumi Nobuhiro、Ueda Takashi
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 117 Issue: 40 Pages: 25150-25158

    • DOI

      10.1073/pnas.2011152117

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The Arabidopsis V-ATPase is localized to the TGN/EE via a seed plant-specific motif2020

    • Author(s)
      Lupanga U., Rohrich R., Askani J., Hilmer S., Kiefer C., Krebs M., Kanazawa T., Ueda T., Schumacher K.
    • Journal Title

      eLife

      Volume: 9

    • DOI

      10.7554/elife.60568

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The liverwort oil body is formed by redirection of the secretory pathway2020

    • Author(s)
      Kanazawa T., Morinaka H., Ebine K., Shimada T.L., Ishida S., Minamino N., Yamaguchi K., Shigenobu S., Kohchi T., Nakano A., Ueda T.
    • Journal Title

      Nature Communications

      Volume: 11 Issue: 1 Pages: 6152-6152

    • DOI

      10.1038/s41467-020-19978-1

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Purification and Interaction Analysis of a Plant-Specific RAB5 Effector by In Vitro Pull-Down Assay2020

    • Author(s)
      Ito Emi、Choi Seung-won、Ueda Takashi
    • Journal Title

      Methods in Molecular Biology

      Volume: 2177 Pages: 183-197

    • DOI

      10.1007/978-1-0716-0767-1_15

    • ISBN
      9781071607664, 9781071607671
    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Role of Autophagy in Male Reproductive Processes in Land Plants2020

    • Author(s)
      Norizuki Takuya、Minamino Naoki、Ueda Takashi
    • Journal Title

      Frontiers in Plant Science

      Volume: 11 Pages: 756-756

    • DOI

      10.3389/fpls.2020.00756

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Improvement of Phycocyanobilin Synthesis for Genetically Encoded Phytochrome-Based Optogenetics2020

    • Author(s)
      Uda Youichi、Miura Haruko、Goto Yuhei、Yamamoto Kei、Mii Yusuke、Kondo Yohei、Takada Shinji、Aoki Kazuhiro
    • Journal Title

      ACS Chemical Biology

      Volume: 15 Issue: 11 Pages: 2896-2906

    • DOI

      10.1021/acschembio.0c00477

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chromatin Organization in Early Land Plants Reveals an Ancestral Association between H3K27me3, Transposons, and Constitutive Heterochromatin2020

    • Author(s)
      Montgomery SA, Tanizawa Y, Galik B, Wang N, Ito T, Mochizuki T, Akimcheva S, Bowman JL, Cognat V, Drouard L, Ekker H, Houng SF, Kohchi T, Lin SS, Liu LYD, Nakamura Y, Valeeva LR, Shakirov EV, Shippen DE, Wei WL, Yagura M, Yamaoka S, Yamato KT, Liu C, Berger F.
    • Journal Title

      Current Biology

      Volume: 30 Issue: 4 Pages: 573-588

    • DOI

      10.1016/j.cub.2019.12.015

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Positional cues regulate dorsal organ formation in the liverwort Marchantia polymorpha2020

    • Author(s)
      Suzuki H, Harrison CJ, Shimamura M, Kohchi T, Nishihama R
    • Journal Title

      J Plant Res.

      Volume: 133 Issue: 3 Pages: 311-321

    • DOI

      10.1007/s10265-020-01180-5

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Design principles of a minimal auxin response system2020

    • Author(s)
      Kato Hirotaka、Mutte Sumanth K.、Suzuki Hidemasa、Crespo Isidro、Das Shubhajit、Radoeva Tatyana、Fontana Mattia、Yoshitake Yoshihiro、Hainiwa Emi、van den Berg Willy、Lindhoud Simon、Ishizaki Kimitsune、Hohlbein Johannes、Borst Jan Willem、Boer D. Roeland、Nishihama Ryuichi、Kohchi Takayuki、Weijers Dolf
    • Journal Title

      Nature Plants

      Volume: 6 Issue: 5 Pages: 473-482

    • DOI

      10.1038/s41477-020-0662-y

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Induction of Multichotomous Branching by CLAVATA Peptide in Marchantia polymorpha2020

    • Author(s)
      Hirakawa Yuki、Fujimoto Toko、Ishida Sakiko、Uchida Naoyuki、Sawa Shinichiro、Kiyosue Tomohiro、Ishizaki Kimitsune、Nishihama Ryuichi、Kohchi Takayuki、Bowman John L.
    • Journal Title

      Current Biology

      Volume: 30 Issue: 19 Pages: 3833-3840

    • DOI

      10.1016/j.cub.2020.07.016

    • Related Report
      2020 Annual Research Report 2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Kinase in the liverwort Marchantia polymorpha; A photosynthesis-dependent kinase for carbon metabolism2020

    • Author(s)
      Koide E, Suetsugu N, Iwano M, Gotoh E, Nomura Y, Stolze SC, Nakagami H, Kohchi T, Nishihama R
    • Journal Title

      Plant Cell & Physiology

      Volume: 61 Issue: 3 Pages: 631-643

    • DOI

      10.1093/pcp/pcz232

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Deep Imaging Analysis in VISUAL Reveals the Role of YABBY Genes in Vascular Stem Cell Fate Determination2020

    • Author(s)
      Nurani Alif Meem、Ozawa Yasuko、Furuya Tomoyuki、Sakamoto Yuki、Ebine Kazuo、Matsunaga Sachihiro、Ueda Takashi、Fukuda Hiroo、Kondo Yuki
    • Journal Title

      Plant and Cell Physiology

      Volume: 61 Issue: 2 Pages: 255-264

    • DOI

      10.1093/pcp/pcaa002

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Cytokinin signaling is essential for organ formation in Marchantia polymorpha2019

    • Author(s)
      Aki Shiori S、Mikami Tatsuya、Naramoto Satoshi、Nishihama Ryuichi、Ishizaki Kimitsune、Kojima Mikiko、Takebayashi Yumiko、Sakakibara Hitoshi、Kyozuka Junko、Kohchi Takayuki、Umeda Masaaki
    • Journal Title

      Plant and Cell Physiology

      Volume: 60 Issue: 8 Pages: 1842-1854

    • DOI

      10.1093/pcp/pcz100

    • NAID

      120006711216

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cytokinin signaling coordinates development of diverse organs in Marchantia polymorpha2019

    • Author(s)
      Aki Shiori S.、Nishihama Ryuichi、Kohchi Takayuki、Umeda Masaaki
    • Journal Title

      Plant Signaling & Behavior

      Volume: 14 Issue: 11 Pages: 1668232-1668232

    • DOI

      10.1080/15592324.2019.1668232

    • NAID

      120006731887

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The RopGEF KARAPPO Is Essential for the Initiation of Vegetative Reproduction in Marchantia polymorpha2019

    • Author(s)
      Hiwatashi T., Goh H., Yasui Y., Koh L.Q., Takami H., Kajikawa M., Kirita H., Kanazawa T., Minamino N., Togawa T., Sato M., Wakazaki M., Yamaguchi K., Shigenobu S., Fukaki H., Mimura T., Toyooka K., Sawa S., Yamato K.T.,Ueda T., Urano D., Kohchi T., Ishizaki K.
    • Journal Title

      Current Biology

      Volume: 29 Issue: 20 Pages: 3525-3531

    • DOI

      10.1016/j.cub.2019.08.071

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] An Early Arising Role of the MicroRNA156/529-SPL Module in Reproductive Development Revealed by the Liverwort Marchantia polymorpha2019

    • Author(s)
      Tsuzuki Masayuki、Futagami Kazutaka、Shimamura Masaki、Inoue Chikako、Kunimoto Kan、Oogami Takashi、Tomita Yuki、Inoue Keisuke、Kohchi Takayuki、Yamaoka Shohei、Araki Takashi、Hamada Takahiro、Watanabe Yuichiro
    • Journal Title

      Current Biology

      Volume: 29 Issue: 19 Pages: 3307-3314

    • DOI

      10.1016/j.cub.2019.07.084

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Protamines from liverwort are produced by posttranslational cleavage and C-terminal di-aminopropanelation of several male germ-specific H1 histones2019

    • Author(s)
      D'Ippolito, RA., Minamino, N, Rivera-Casas, C., Cheema, MS, Bai, DL., Kasinsky, HE., Shabanowitz, J., Eirin-Lopez, JM., Ueda, T., Hunt, DF., and Ausio, J.
    • Journal Title

      J. Biol. Chem.

      Volume: 未定 Issue: 44 Pages: 16364-16373

    • DOI

      10.1074/jbc.ra119.010316

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] HIGH STEROL ESTER 1 is a key factor in plant sterol homeostasis2019

    • Author(s)
      Shimada Takashi L.、Shimada Tomoo、Okazaki Yozo、Higashi Yasuhiro、Saito Kazuki、Kuwata Keiko、Oyama Kaori、Kato Misako、Ueda Haruko、Nakano Akihiko、Ueda Takashi、Takano Yoshitaka、Hara-Nishimura Ikuko
    • Journal Title

      Nature Plants

      Volume: 5 Issue: 11 Pages: 1154-1166

    • DOI

      10.1038/s41477-019-0537-2

    • NAID

      120006773162

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] GEMMA CUP-ASSOCIATED MYB1, an ortholog of axillary meristem regulators, is essential in vegetative reproduction in Marchantia polymorpha.2019

    • Author(s)
      Yasui Y, Tsukamoto S, Sugaya T, Nishihama R, Wang Q, Kato H, Yamato KT, Fukaki H, Mimura T, Kubo H, Theres K, Kohchi T, Ishizaki K.
    • Journal Title

      Curr Biol.

      Volume: 29 Issue: 23 Pages: 3987-3995

    • DOI

      10.1016/j.cub.2019.10.004

    • NAID

      120006773950

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A conserved regulatory mechanism mediates the convergent evolution of plant shoot lateral organs.2019

    • Author(s)
      Naramoto S, Jones VAS, Nicola, N, Sato M,Toyooka K, Shimamura M, Ishida S, Nishitani K,Ishizaki K, Nishihama R, Kohchi T, Dolan L, Kyozuka J.
    • Journal Title

      PLoS Biology

      Volume: 17 Issue: 12 Pages: 12-12

    • DOI

      10.1371/journal.pbio.3000560

    • NAID

      120006813343

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Enrichment of Phosphatidylinositol 4,5-Bisphosphate in the Extra-Invasive Hyphal Membrane Promotes Colletotrichum Infection of Arabidopsis thaliana2019

    • Author(s)
      Shimada Takashi L、Betsuyaku Shigeyuki、Inada Noriko、Ebine Kazuo、Fujimoto Masaru、Uemura Tomohiro、Takano Yoshitaka、Fukuda Hiroo、Nakano Akihiko、Ueda Takashi
    • Journal Title

      Plant and Cell Physiology

      Volume: 60 Issue: 7 Pages: 1514-1524

    • DOI

      10.1093/pcp/pcz058

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Marchantia polymorpha, a New Model Plant for Autophagy Studies2019

    • Author(s)
      Norizuki T., Kanazawa T., Minamino N., Tsukaya H., Ueda T.
    • Journal Title

      Frontiers in Plant Science

      Volume: 10 Pages: 935-935

    • DOI

      10.3389/fpls.2019.00935

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Regulation of the Poly(A) Status of Mitochondrial mRNA by Poly(A)-Specific Ribonuclease Is Conserved among Land Plants2019

    • Author(s)
      Kanazawa Mai、Ikeda Yoko、Nishihama Ryuichi、Yamaoka Shohei、Lee Nam-Hee、Yamato Katsuyuki T、Kohchi Takayuki、Hirayama Takashi
    • Journal Title

      Plant and Cell Physiology

      Volume: 61 Issue: 3 Pages: 470-480

    • DOI

      10.1093/pcp/pcz212

    • NAID

      120006900804

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Acquisition and secondary loss of membrane trafficking pathways -lessons from Marchantia-2023

    • Author(s)
      Takashi Ueda
    • Organizer
      JAPAN-UK Plant Cell Wall Symposium
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Recycling pathway from the vacuole in plant cells2023

    • Author(s)
      Takashi Ueda
    • Organizer
      NIBB-COS Workshop
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 分泌経路の向こう側へ -植物の新規オルガネラ獲得戦略-2023

    • Author(s)
      上田貴志
    • Organizer
      第96回日本生化学会大会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] How plants aquired new organelles -Lessons from Marchantia-2021

    • Author(s)
      Takashi Ueda
    • Organizer
      Plant Cell Dynamics 2021
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Sex determination system in the liverwort Marchantia polymorpha2021

    • Author(s)
      Takayuki Kohchi
    • Organizer
      Bryophytes, lichens, and northern ecosystems in a changing world (BL2021)
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Sexual reproduction and sex differentiation in gametophyte generation2021

    • Author(s)
      Takayuki Kohchi
    • Organizer
      MAdLAND seminar
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Sex determination factor and sex chromosome evolution in a haploid system2021

    • Author(s)
      Takayuki Kohchi
    • Organizer
      Kyoto-Zurich Workshop Plant Science
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] How Plants acquired new organelles -Lessons from Marchantia-2020

    • Author(s)
      Takashi Ueda
    • Organizer
      International Webinar Series: From Cellular dynamics to Morphology
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Evolution of reproductive induction and sex determination in land plants2020

    • Author(s)
      Takayuki Kohchi
    • Organizer
      International Conference of the Genetics Society of Korea (ICGSK)
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Regulation of reproductive induction and sex determination in Marchantia polymorpha2020

    • Author(s)
      Takayuki Kohchi
    • Organizer
      Marchantia Meeting in UK
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] How Plants acquired new organelles -Lessons from Marchantia2020

    • Author(s)
      Takashi Ueda
    • Organizer
      International Webinar Series: From Cellular dynamics to Morphology
    • Related Report
      2019 Annual Research Report
  • [Presentation] Organelle functions and membrane trafficking in plant cells2019

    • Author(s)
      Takashi Ueda
    • Organizer
      EMBO practical course
    • Related Report
      2019 Annual Research Report

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Published: 2019-07-04   Modified: 2024-12-25  

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