• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Novel function of the post-Koch ecosystem found only on microbial consortia

Planned Research

Project AreaPost-Koch Ecology: The next-era microbial ecology that elucidates the super-terrestrial organism system
Project/Area Number 19H05686
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Complex systems
Research InstitutionThe University of Tokyo

Principal Investigator

Nojiri Hideaki  東京大学, 大学院農学生命科学研究科(農学部), 教授 (90272468)

Co-Investigator(Kenkyū-buntansha) 新谷 政己  静岡大学, 工学部, 准教授 (20572647)
Project Period (FY) 2019-06-28 – 2024-03-31
Project Status Completed (Fiscal Year 2023)
Budget Amount *help
¥135,850,000 (Direct Cost: ¥104,500,000、Indirect Cost: ¥31,350,000)
Fiscal Year 2023: ¥25,220,000 (Direct Cost: ¥19,400,000、Indirect Cost: ¥5,820,000)
Fiscal Year 2022: ¥25,220,000 (Direct Cost: ¥19,400,000、Indirect Cost: ¥5,820,000)
Fiscal Year 2021: ¥25,220,000 (Direct Cost: ¥19,400,000、Indirect Cost: ¥5,820,000)
Fiscal Year 2020: ¥25,220,000 (Direct Cost: ¥19,400,000、Indirect Cost: ¥5,820,000)
Fiscal Year 2019: ¥34,970,000 (Direct Cost: ¥26,900,000、Indirect Cost: ¥8,070,000)
Keywords微生物間相互作用 / 複合系 / 環境汚染物質 / 分解菌 / プラスミド / 接合伝達 / 細菌 / ドロップレット / ラマン散乱 / 遺伝子の水平伝播
Outline of Research at the Start

本研究では、環境汚染物質を微生物集団が分解する系をモデルに、集団のメンバーの機能が集団内と単離状態でどう変化するのか実体と機構を解明する。また、微生物機能が周囲の動植物の存在でどう変化するのかを明らかにし、高等生物との未知の相互作用を発見する。これらを通して、複合系ではじめて発揮される、新奇遺伝子機能を発見する。
また、他の計画班で単離された新奇微生物の機能に影響する周囲の微生物を探索し、その相互作用の実体を解明する。
上で得られる情報を他の計画班に供給することで微生物集団内の共起ネットワークが構築されるが、実証試験も行うことで、モデル圃場内のポストコッホ機能生態系モデルの創生に貢献する。

Outline of Final Research Achievements

In order to analyze the interactions between the pollutant-degrading bacteria and surrounding bacteria under the natural environmental condition, we developed Post-Koch techniques based on the “isolated cultivation” and/or “single-cell inoculation”. By using these, we were able to easily obtain a diverse group of degradative bacteria and easily detect interactions that affect their function. We also applied the developed techniques to detect interactions between important bacteria isolated from the model field soil and other bacteria.
Meanwhile, we obtained a large number of different plasmids from model fields. Based on their nucleotide sequences and basic functions (conjugation and replication host ranges), we classified the isolated plasmids and discussed the plasmid dynamics in model field environments. We also developed a method to predict conjugation host range and compiled a high-precision plasmid database.

Academic Significance and Societal Importance of the Research Achievements

環境中での微生物間相互作用は、従来の方法論では偶然見つかる場合がほとんどで、全貌解明にはほど遠いのが実情であった。本研究は、相互作用を簡単に探せる系を開発し、それらが環境汚染物質分解菌等の相互作用検出に有用なことを実証したもので、他の分野にも応用可能な重要な方法論を提供するものである。また、環境中での遺伝子水平伝播の実態を生態学的に捉えた例は少ないが、本研究ではモデル圃場内でのプラスミド動態を高精細に明らかにした。この成果は、環境細菌の機能的進化といった基礎的観点のみならず、薬剤耐性能の蔓延などの社会問題を解決する上でも重要と言え、環境微生物学・生態学分野で先導的な成果をあげたと言える。

Report

(6 results)
  • 2023 Annual Research Report   Final Research Report ( PDF )
  • 2022 Annual Research Report
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • 2019 Annual Research Report
  • Research Products

    (306 results)

All 2024 2023 2022 2021 2020 2019 Other

All Int'l Joint Research (22 results) Journal Article (31 results) (of which Int'l Joint Research: 13 results,  Peer Reviewed: 31 results,  Open Access: 22 results) Presentation (253 results) (of which Int'l Joint Research: 55 results,  Invited: 33 results)

  • [Int'l Joint Research] ユリウス・クーン研究所(ドイツ)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] ルジェル・ボシュコビッチ研究所(クロアチア)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] インド工科大学ハイデラバード校/Charotar Univ. of Sci. & Technol.(インド)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] Pau大学(フランス)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] チュラロンコン大学(タイ)

    • Related Report
      2023 Annual Research Report
  • [Int'l Joint Research] ユリウス・クーン研究所(ドイツ)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] インド工科大学ハイデラバード校/RK University(インド)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] University of Pau and Pays de l'Adour(フランス)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] Chulalongkorn University/Mahidol University(タイ)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] ルジェル・ボシュコビッチ研究所(クロアチア)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] ユリウス・クーン研究所(ドイツ)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] インド工科大学ハイデラバード校(インド)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] University of Pau and Pays de l'Adour(フランス)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] Chulalongkorn University/Mahidol University(タイ)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] マレーシア工科大学(マレーシア)

    • Related Report
      2021 Annual Research Report
  • [Int'l Joint Research] ワイツマン科学研究所(イスラエル)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] ユリウス・クーン研究所(ドイツ)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] マレーシア工科大学(マレーシア)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] University of Pau and Pays de l'Adour(フランス)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research] Chulalongkorn University/Mahidol University(タイ)

    • Related Report
      2020 Annual Research Report
  • [Int'l Joint Research]

    • Related Report
      2020 Annual Research Report
  • [Journal Article] Microbial evolution through horizontal gene transfer by mobile genetic elements2024

    • Author(s)
      Tokuda Maho、Shintani Masaki
    • Journal Title

      Microbial Biotechnology

      Volume: 17 Issue: 1

    • DOI

      10.1111/1751-7915.14408

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chromosome-scale genome assembly of an acidophilic microalga <i>Tetratostichococcus</i> sp. P1 isolated from a tropical peatland in Malaysia2024

    • Author(s)
      Maeda Yoshiaki、Hirakawa Toshiki、Suzuki Shigekatsu、Suhaimi Noraiza、Shamsol Anuar Nurul Syahirah、Yoneda Kohei、Shintani Masaki、Suzuki Kenshi、Sunagawa Naoki、Kawachi Masanobu、Suzuki Iwane、Hara Hirofumi
    • Journal Title

      Microbiology Resource Announcements

      Volume: 13 Issue: 2

    • DOI

      10.1128/mra.00816-23

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Transcriptional heterogeneity of catabolic genes on the plasmid pCAR1 causes host-specific carbazole degradation2024

    • Author(s)
      Suzuki-Minakuchi Chiho、Yamamoto Natsumi、Takahira Saki、Yamaguchi Masataka、Takeda Yutaro、Okada Kazunori、Shigeto Shinsuke、Nojiri Hideaki
    • Journal Title

      Applied and Environmental Microbiology

      Volume: 90 Issue: 2

    • DOI

      10.1128/aem.01247-23

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Stable States of a Microbial Community Are Formed by Dynamic Metabolic Networks with Members Functioning to Achieve Both Robustness and Plasticity2024

    • Author(s)
      Masahiro Honjo, Kenshi Suzuki, Junya Katai, Yosuke Tashiro, Tomo Aoyagi, Tomoyuki Hori, Takashi Okada, Yasuhisa Saito, Hiroyuki Futamata
    • Journal Title

      Microbes and Environments

      Volume: 39 Issue: 1 Pages: n/a

    • DOI

      10.1264/jsme2.ME23091

    • ISSN
      1342-6311, 1347-4405
    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Transconjugant range of PromA plasmids in microbial communities is predicted by sequence similarity with the bacterial host chromosome2023

    • Author(s)
      Tokuda Maho、Yuki Masahiro、Ohkuma Moriya、Kimbara Kazuhide、Suzuki Haruo、Shintani Masaki
    • Journal Title

      Microbial Genomics

      Volume: 9 Issue: 6 Pages: 1-6

    • DOI

      10.1099/mgen.0.001043

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Isolation and Genomic Analysis of 3-Chlorobenzoate-Degrading Bacteria from Soil2023

    • Author(s)
      Ara Ifat, Moriuchi Ryota, Dohra Hideo, Kimbara Kazuhide, Ogawa Naoto, Shintani Masaki
    • Journal Title

      Microorganisms

      Volume: 11 Issue: 7 Pages: 1684-1684

    • DOI

      10.3390/microorganisms11071684

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Integrons, transposons and <scp>IS</scp> elements promote diversification of multidrug resistance plasmids and adaptation of their hosts to antibiotic pollutants from pharmaceutical companies2023

    • Author(s)
      Shintani Masaki、Vestergaard Gisle、Milakovic Milena、Kublik Susanne、Smalla Kornelia、Schloter Michael、Udikovic‐Kolic Nikolina
    • Journal Title

      Environmental Microbiology

      Volume: 25 Issue: 12 Pages: 3035-3051

    • DOI

      10.1111/1462-2920.16481

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Draft genome sequence of the marine-derived, anticancer compound-producing bacterium Streptomyces sp. strain GMY012023

    • Author(s)
      Widada Jaka、Damayanti Ema、Herdini Camelia、Wijayanti Nastiti、Hosoyama Akira、Yamazoe Atsushi、Suzuki-Minakuchi Chiho、Hariwiyanto Bambang、Mubarika Sofia、Dinoto Achmad、Mustofa、Nojiri Hideaki
    • Journal Title

      Microbiology Resource Announcements

      Volume: 12 Issue: 6

    • DOI

      10.1128/mra.01366-20

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Reconsideration of the previously classified incompatibility groups of plasmids, IncP-1 and IncP-112023

    • Author(s)
      Shintani Masaki、Suzuki Haruo、Nojiri Hideaki、Suzuki Masato
    • Journal Title

      Environmental Microbiology

      Volume: - Issue: 6 Pages: 1071-1076

    • DOI

      10.1111/1462-2920.16345

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Complete Genome Sequence of Rhodococcus qingshengii N9T-42022

    • Author(s)
      Obi Nobuhiro、Moriuchi Ryota、Dohra Hideo、Kimbara Kazuhide、Shintani Masaki、Yoshida Nobuyuki
    • Journal Title

      Microbiology Resource Announcements

      Volume: 11 Issue: 12

    • DOI

      10.1128/mra.00891-22

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Hitherto-Unnoticed Self-Transmissible Plasmids Widely Distributed among Different Environments in Japan2022

    • Author(s)
      Hayakawa Masaya、Tokuda Maho、Kaneko Kensei、Nakamichi Koichiro、Yamamoto Yukie、Kamijo Tatsuya、Umeki Honoka、Chiba Reimi、Yamada Ryo、Mori Mitsuya、Yanagiya Kosuke、Moriuchi Ryota、Yuki Masahiro、Dohra Hideo、Futamata Hiroyuki、Ohkuma Moriya、Kimbara Kazuhide、Shintani Masaki
    • Journal Title

      Applied and Environmental Microbiology

      Volume: 88 Issue: 18

    • DOI

      10.1128/aem.01114-22

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Rhizospheric plant-microbe synergistic interactions achieve efficient arsenic phytoextraction by Pteris vittata2022

    • Author(s)
      Yang Chongyang、Han Ning、Inoue Chihiro、Yang Yu-Liang、Nojiri Hideaki、Ho Ying-Ning、Chien Mei-Fang
    • Journal Title

      Journal of Hazardous Materials

      Volume: 434 Pages: 128870-128870

    • DOI

      10.1016/j.jhazmat.2022.128870

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Physiological changes in Rhodococcus ruber S103 immobilized on biobooms using low-cost media enhance stress tolerance and crude oil-degrading activity2022

    • Author(s)
      Naloka Kallayanee、Jaroonrunganan Jirakit、Woratecha Naphatsakorn、Khondee Nichakorn、Nojiri Hideaki、Pinyakong Onruthai
    • Journal Title

      Scientific Reports

      Volume: 12 Issue: 1 Pages: 10474-10474

    • DOI

      10.1038/s41598-022-14488-0

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Low-cost gel-filled microwell array device for screening marine microbial consortium2022

    • Author(s)
      Clelia Duran, Shiyi Zhang, Chongyang Yang, Maria Lorena Falco, Cristiana Cravo-Laureau, Chiho Suzuki-Minakuchi, Hideaki Nojiri, Robert Duran, Fumihiro Sassa
    • Journal Title

      Frontiers in Microbiology

      Volume: 13 Pages: 01-09

    • DOI

      10.3389/fmicb.2022.1031439

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Precise classification of antimicrobial resistance-associated IncP-2 megaplasmids for molecular epidemiological studies on <i>Pseudomonas</i> species2022

    • Author(s)
      Shintani Masaki、Suzuki Haruo、Nojiri Hideaki、Suzuki Masato
    • Journal Title

      Journal of Antimicrobial Chemotherapy

      Volume: 77 Issue: 4 Pages: 1202-1204

    • DOI

      10.1093/jac/dkac006

    • NAID

      120007188390

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A toxin-antitoxin system confers stability to the IncP-7 plasmid pCAR12022

    • Author(s)
      Takashima Aya、Kawano Hibiki、Ueda Tomomi、Suzuki-Minakuchi Chiho、Okada Kazunori、Nojiri Hideaki
    • Journal Title

      Gene

      Volume: 812 Pages: 146068-146068

    • DOI

      10.1016/j.gene.2021.146068

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Incorporation of Plasmid DNA Into Bacterial Membrane Vesicles by Peptidoglycan Defects in Escherichia coli2021

    • Author(s)
      Aktar Sharmin、Okamoto Yuhi、Ueno So、Tahara Yuhei O.、Imaizumi Masayoshi、Shintani Masaki、Miyata Makoto、Futamata Hiroyuki、Nojiri Hideaki、Tashiro Yosuke
    • Journal Title

      Frontiers in Microbiology

      Volume: 12 Pages: 747606-747606

    • DOI

      10.3389/fmicb.2021.747606

    • NAID

      120007185149

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Fluviispira sanaruensis sp., nov., Isolated from a Brackish Lake in Hamamatsu, Japan2021

    • Author(s)
      Maejima Yoshiaki、Iino Takao、Moriuchi Ryota、Kushimoto Koya、Muraguchi Yusuke、Fukuda Kohei、Nojiri Hideaki、Ohkuma Moriya、Dohra Hideo、Kimbara Kazuhide、Shintani Masaki
    • Journal Title

      Current Microbiology

      Volume: 78 Issue: 8 Pages: 3268-3276

    • DOI

      10.1007/s00284-021-02561-2

    • NAID

      120007053399

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Imbalance in Carbon and Nitrogen Metabolism in <i>Comamonas testosteroni</i> R2 Is Caused by Negative Feedback and Rescued by L-arginine2021

    • Author(s)
      Abd Rahman Jabir Mohd Din, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Tomoka Nishimura, Ryota Moriuchi, Hideo Dohra, Hidehiro Ishizawa, Motohiko Kimura, Yosuke Tashiro, and Hiroyuki Futamata
    • Journal Title

      Microbes and Environments

      Volume: 36 Issue: 4 Pages: n/a

    • DOI

      10.1264/jsme2.ME21050

    • NAID

      130008103594

    • ISSN
      1342-6311, 1347-4405
    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Coexisting mechanisms of bacterial community are changeable even under similar stable conditions in a chemostat culture2021

    • Author(s)
      Fatma Azwani Abdul Aziz, Kenshi Suzuki, Masahiro Honjo, Koki Amano, Abd Rahman Jabir Bin Mohd Din, Yosuke Tashiro, and Hiroyuki Futamata
    • Journal Title

      Journal of Bioscience and Bioengineering

      Volume: 131 Issue: 1 Pages: 7783-7783

    • DOI

      10.1016/j.jbiosc.2020.09.009

    • NAID

      40022457739

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Effects of environmental factors and coexisting substrates on PAH degradation and transcriptomic responses of the defined bacterial consortium OPK2021

    • Author(s)
      Laothamteep Natthariga、Kawano Hibiki、Vejarano Felipe、Suzuki-Minakuchi Chiho、Shintani Masaki、Nojiri Hideaki、Pinyakong Onruthai
    • Journal Title

      Environmental Pollution

      Volume: 277 Pages: 116769-116769

    • DOI

      10.1016/j.envpol.2021.116769

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A novel gene cluster is involved in the degradation of lignin-derived monoaromatics in Thermus oshimai JL-22021

    • Author(s)
      Chakraborty Joydeep、Suzuki-Minakuchi Chiho、Tomita Takeo、Okada Kazunori、Nojiri Hideaki
    • Journal Title

      Applied and Environmental Microbiology

      Volume: - Issue: 11

    • DOI

      10.1128/aem.01589-20

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Determination of Plasmid pSN1216-29 Host Range and the Similarity in Oligonucleotide Composition Between Plasmid and Host Chromosomes2020

    • Author(s)
      Tokuda Maho、Suzuki Haruo、Yanagiya Kosuke、Yuki Masahiro、Inoue Kengo、Ohkuma Moriya、Kimbara Kazuhide、Shintani Masaki
    • Journal Title

      Frontiers in Microbiology

      Volume: 11 Pages: 1187-1187

    • DOI

      10.3389/fmicb.2020.01187

    • NAID

      120006860051

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Plant Species-Dependent Increased Abundance and Diversity of IncP-1 Plasmids in the Rhizosphere: New Insights Into Their Role and Ecology2020

    • Author(s)
      Shintani Masaki、Nour Eman、Elsayed Tarek、Blau Khald、Wall Inessa、Jechalke Sven、Sproer Cathrin、Bunk Boyke、Overmann Jorg、Smalla Kornelia
    • Journal Title

      Frontiers in Microbiology

      Volume: 11 Pages: 590776-590776

    • DOI

      10.3389/fmicb.2020.590776

    • NAID

      120006942489

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] H-NS Family Proteins Drastically Change Their Targets in Response to the Horizontal Transfer of the Catabolic Plasmid pCAR12020

    • Author(s)
      Nakamura T, Suzuki-Minakuchi C, Kawano H, Kanesaki Y, Kawasaki S, Okada K, Nojiri H.
    • Journal Title

      Frontiers in Microbiology

      Volume: 11 Pages: 1099-1099

    • DOI

      10.3389/fmicb.2020.01099

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A Novel Small RNA on the Pseudomonas putida KT2440 Chromosome Is Involved in the Fitness Cost Imposed by IncP-1 Plasmid RP42020

    • Author(s)
      Kawano Hibiki、Suzuki-Minakuchi Chiho、Sugiyama Daisuke、Watanabe Natsuki、Takahashi Yurika、Okada Kazunori、Nojiri Hideaki
    • Journal Title

      Frontiers in Microbiology

      Volume: 11 Pages: 1328-1328

    • DOI

      10.3389/fmicb.2020.01328

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Oxygen concentration affects frequency and range of transconjugants for the incompatibility (Inc) P-1 and P-7 plasmids pBP136 and pCAR12020

    • Author(s)
      Ochi Kentaro、Tokuda Maho、Yanagiya Kosuke、Suzuki-Minakuchi Chiho、Nojiri Hideaki、Yuki Masahiro、Ohkuma Moriya、Kimbara Kazuhide、Shintani Masaki
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 85 Issue: 4 Pages: 1005-1015

    • DOI

      10.1093/bbb/zbaa118

    • NAID

      120007053400

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conversion of methyl carlactonoate to heliolactone in sunflower2020

    • Author(s)
      Takatoshi Wakabayashi, Hikaru Shinde, Nanami Shiotani, Shunya Yamamoto, Masaharu Mizutani, Hirosato Takikawa, Yukihiro Sugimoto
    • Journal Title

      Natural Product Research

      Volume: - Pages: 129663-129663

    • DOI

      10.1016/j.chemosphere.2021.129663

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A Rotational Slurry Bioreactor Accelerates Biodegradation of A-Fuel in Oil-Contaminated Soil Even under Low Temperature Conditions2020

    • Author(s)
      Miyoshi Yuna、Okada Jo、Urata Tomotaka、Shintani Masaki、Kimbara Kazuhide
    • Journal Title

      Microorganisms

      Volume: 8 Issue: 2 Pages: 291-291

    • DOI

      10.3390/microorganisms8020291

    • NAID

      120006821299

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Complete Genome Sequence of Thalassococcus sp. Strain S3, a Marine Roseobacter Clade Member Capable of Degrading Carbazole2019

    • Author(s)
      Vejarano Felipe、Suzuki-Minakuchi Chiho、Ohtsubo Yoshiyuki、Tsuda Masataka、Okada Kazunori、Nojiri Hideaki
    • Journal Title

      Microbiology Resource Announcements

      Volume: 8 Issue: 28

    • DOI

      10.1128/mra.00231-19

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Biotransformation of Monocyclic Phenolic Compounds by Bacillus licheniformis TAB72019

    • Author(s)
      Mpofu Enock、Chakraborty Joydeep、Suzuki-Minakuchi Chiho、Okada Kazunori、Kimura Toshiaki、Nojiri Hideaki
    • Journal Title

      Microorganisms

      Volume: 8 Issue: 1 Pages: 26-26

    • DOI

      10.3390/microorganisms8010026

    • Related Report
      2019 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] プラスミドが接合伝達する細菌を塩基配列の特徴から予測する2024

    • Author(s)
      德田真穂, 敦賀俊太, 前田壮, 山﨑凜, 金原和秀, 新谷政己
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] IncP/P-1群プラスミドの異なる亜群に属するプラスミドの性状の違いとその原因の解析2024

    • Author(s)
      新谷政己, 前田壮, 徳田真穂, 敦賀俊太, 上條遙陽, 金原和秀
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Pseudomonas属細菌由来のプラスミドの複製に必要なDNA領域の同定2024

    • Author(s)
      磯貝菜々子, 德田真穂, 水口千穂, 金原和秀, 野尻秀昭, 鈴木仁人, 新谷政己
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] フィリピンにおける薬剤耐性菌および耐性遺伝子の伝播に寄与するプラスミドの同定2024

    • Author(s)
      増元めぐみ, 德田真穂, 佐藤佑香, 敦賀俊太, 野上勇魚, 金原和秀, 鈴木仁人, 新谷政己
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミドの接合伝達の可否と,プラスミドと細菌染色体間の塩基組成類似性の関係2024

    • Author(s)
      山﨑凜, 德田真穂, 敦賀俊太, 前田壮, 金原和秀, 新谷政己
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミド保持に伴う負荷を回避するための代謝制御様式の解明2024

    • Author(s)
      日高 聖覚、水口 千穂、鈴木 研志、岡田 憲典、岡橋 伸幸、野尻 秀昭
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] ピレン分解菌の分解能を変化させる環境細菌の効率的な取得とその同定2024

    • Author(s)
      鈴木 仁子、ベハラノ フェリペ、水口 千穂、岡田 憲典、ピンヤコン オルタイ、野尻 秀昭
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] ナノ内視鏡AFMによるバクテリア細胞内部の可視化2024

    • Author(s)
      牛嶋 勇貴, 後藤 拓海, 江本 光毅, 宮澤 佳甫, 水口 千穂, 岡田 憲典, 福間 剛士, 野尻 秀昭
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミドpCAR1由来の核様体タンパク質PndのDNA結合様式の解明2024

    • Author(s)
      江本 光毅、水口 千穂、森脇 由隆、YANG Miaoyan、鈴木 研志、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Comamonas thiooxydans R2株におけるフェノール分解と機能的分化2024

    • Author(s)
      鈴木 研志、上原 悠太郎、水口 千穂、二又 裕之、野尻 秀昭
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Intermediates accumulation on pyrene degradation within pyrene-degrading bacterial consortia2024

    • Author(s)
      Yuanhao ZHU, Felipe VEJARANO, Chiho SUZUKI-MINAKUCHI, Kazunori OKADA, Onruthai PINYAKONG, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 微小結晶蛍光測定法および一細胞技術によって得られた多環芳香族化合物分解菌の解析2024

    • Author(s)
      ベハラノフェリペ, 水口千穂, 岡田憲典, PINYAKONG Onruthai, 野尻秀昭
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Metagenomic insights for naphthalene-degrading bacteria obtained by droplet-based microfluidics2024

    • Author(s)
      Chongyang YANG, Satoko MATSUKURA, Chiho SUZUKI-MINAKUCHI, Kazunori OKADA, Naohiro NODA, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] ゲル充填マイクロウェルアレイデバイスによるナフタレン分解菌群の取得と解析2024

    • Author(s)
      劉禹忻, 楊重陽, 張詩芸, 水口千穂, 岡田憲典, 佐々文洋, 野尻秀昭
    • Organizer
      日本農芸化学会2024年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミド‐宿主染色体間相互作用の構築に重要な新規核様体タンパク質PndのDNA結合様式2024

    • Author(s)
      水口 千穂、江本 光毅、森脇 由隆、Yang Miaoyan、佐道 陽弘、鈴木 研志、荷村(松根) かおり、松谷 峰之介、渡辺 智、岡田 憲典、野尻 秀昭
    • Organizer
      第18回日本ゲノム微生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] AlphaFoldを用いた構造予測に基づく核様体タンパク質のDNA 結合様式の解明2024

    • Author(s)
      江本 光毅、水口 千穂、森脇 由隆、Yang Miaoyan、鈴木 研志、岡田 憲典、野尻 秀昭
    • Organizer
      第18回日本ゲノム微生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Behaviors of plasmids in different natural environments2023

    • Author(s)
      Masaki Shintani, Haruo Suzuki, Hideaki Nojiri, Masato Suzuki
    • Organizer
      Power of Microbes in Industry and Environment 2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 新規IncP/P-1群プラスミドの性状の分子遺伝学的比較2023

    • Author(s)
      敦賀俊太, 上條遥陽, 德田真穂, 金原和秀, 新谷政己
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミドの接合伝達現象にアミロイドタンパク質の有無が及ぼす影響2023

    • Author(s)
      白井浩貴, 田代陽介, 金原和秀, 新谷政己
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Rhodococcus qingshengii N9T-4株のアルカン分解機構の解明2023

    • Author(s)
      佐藤佑香, 小尾信博, 金原和秀, 吉田信行, 新谷政己
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 酸素の存在がプラスミドの伝播に違いをもたらすメカニズムの探索2023

    • Author(s)
      野上勇魚, 金原和秀, 二又裕之, 新谷政己
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 超低栄養性細菌におけるアルコール脱水素酵素の意義2023

    • Author(s)
      近藤雪,池田裕布里,新谷 政己,吉田 信行
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 高曲率性膜認識プローブを利用した膜小胞産生細菌の迅速検出法開発2023

    • Author(s)
      大野一騎,佐藤雄介,德田真穂,新谷政己,大熊盛也,二又裕之,田代陽介
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Comamonas thiooxydans R2株のフェノール分解における個体群内形質不均一性と機能維持機構2023

    • Author(s)
      鈴木 研志、上原 悠太郎、水口 千穂、栗栖 太、二又 裕之、野尻 秀昭
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Pseudomonas属細菌の核様体タンパク質TurBの多量体形成機構2023

    • Author(s)
      水口 千穂、Vasileva Delyana、荒川 孝俊、米澤 健人、清水 伸隆、森脇 由隆、岡田 憲典、野尻 秀昭
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Pseudomonas属細菌の核様体タンパク質TurBの多量体形成機構2023

    • Author(s)
      ベハラノ フェリペ 、鈴木 仁子、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 微生物間相互作用に着目した数理モデルによる異属三菌株共存機構の予測2023

    • Author(s)
      本荘 雅宏、鈴木 研志、齋藤 保久、武田 和宏、木村 元彦、石澤 秀紘、田代 陽介、二又 裕之
    • Organizer
      環境バイオテクノロジー学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Pseudomonas plasmids revisited: new insights and comprehensive analysis of their features for horizontal gene transfer2023

    • Author(s)
      Masaki Shintani, Haruo Suzuki, Hideaki Nojiri, Masato Suzuki
    • Organizer
      Bageco2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The features of IncP/P-1 plasmid would be predicted by k-mer compositions2023

    • Author(s)
      Maho Tokuda, Honoka Umeki, Haruhi Kamijo, Shunta Tsuruga, Haruo Suzuki, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      Bageco2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Single-cell analysis revealed that PromA plasmids were originally possessed by diverse bacteria in natural environments2023

    • Author(s)
      Suzuka Kawakita, Yukie Yamamoto, Yuri Ota, Tetsushi Suyama, Naohiro Noda, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      Bageco2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] プラスミド接合伝達の予測向上のためのゲノム解析と接合実験データの統合的アプローチ2023

    • Author(s)
      德田真穂, 敦賀俊太, 前田壮, 山崎凜, 金原和秀, 新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 新規IncP/P-1群プラスミドの接合伝達頻度に違いをもたらす因子の解明2023

    • Author(s)
      上條遥陽, 梅木穂乃花, 敦賀俊太, 德田真穂, 金原和秀, 新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] シングルセル解析でPromA群プラスミドの天然の宿主を同定する2023

    • Author(s)
      川北鈴香, 山本雪絵, 大田悠里, 陶山哲志, 野田尚宏, 金原和秀, 新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミドの接合伝達現象にアミロイドタンパク質の有無が及ぼす影響2023

    • Author(s)
      白井浩貴, 田代陽介, 金原和秀, 新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] PromA群プラスミドが複製時に示す温度感受性の要因解明2023

    • Author(s)
      白木友博, 德田真穂, 金原和秀,新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Rhodococcus qingshengii N9T-4株のn-アルカン分解機構の解明2023

    • Author(s)
      佐藤佑香, 小尾信博, 吉田信行, 金原和秀, 新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 酸素の有無がプラスミド伝播に違いをもたらすメカニズムの解明2023

    • Author(s)
      野上勇魚, 金原和秀, 二又裕之, 新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 数理モデルを用いた基質競合菌株の動的共存状態における微生物間相互作用の理解2023

    • Author(s)
      本荘雅宏、鈴木研志、齋藤保久、武田和宏、木村元彦、石澤秀紘、田代陽介、二又裕之
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 微生物進化を促すプラスミドの複製・維持能に影響を及ぼす因子の探索2023

    • Author(s)
      敦賀俊太, 梅木穂乃花, 上條遥陽, 德田真穂, 金原和秀, 新谷政己
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 微生物生態系における協調的機能発揮と維持2023

    • Author(s)
      鈴木 研志
    • Organizer
      微生物生態学会2023年度大会
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] Universality and diversity of H-NS family proteins in their oligomerization manners2023

    • Author(s)
      Chiho Suzuki-Minakuchi
    • Organizer
      第46回日本分子生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Plasmid-chromosome cross-talks to maximize the plasmid-borne catabolic capacity for degradation of aromatic hydrocarbons2023

    • Author(s)
      Chiho Suzuki-Minakuchi
    • Organizer
      EcotoxicoMicYR 2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Robust Consortium Screening using Fluorescence-Activated Cell Sorting for Enhanced Pyrene Degradation under Climate Change Scenarios2023

    • Author(s)
      Kallayanee Naloka, Felipe Vejarano, Satoko Suzuki, Prinpida Sonthipahnd, Nuttapon Pombubpa, Kenshi Suzuki, Chiho Suzuki-Minakuchi, Masaki Shintani, Hideaki Nojiri, Onruthai Pinyakong
    • Organizer
      The 35th Annual Meeting of the Thai Society for Biotechnology and International Conference (TSB 2023)
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ナノ内視鏡AFMによるバクテリア細胞内部構造の可視化2023

    • Author(s)
      牛嶋勇貴、後藤拓海、江本光毅、宮澤佳甫、水口千穂、岡田憲典、福間剛士、野尻秀昭
    • Organizer
      第21回微生物研究会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミドの保持によって宿主のどの代謝経路が影響を受けるか?2023

    • Author(s)
      日高聖覚、水口千穂、鈴木研志、岡田憲典、岡橋 伸幸、野尻 秀昭
    • Organizer
      第21回微生物研究会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミドの新しいデータベース構築に向けて2023

    • Author(s)
      野尻 秀昭
    • Organizer
      遺伝研研究会「プラスミドの網羅的データベースの再整備に向けて」
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] 核様体タンパク質がプラスミドと宿主の相性を決める?2023

    • Author(s)
      水口 千穂
    • Organizer
      遺伝研研究会「プラスミドの網羅的データベースの再整備に向けて」
    • Related Report
      2023 Annual Research Report
    • Invited
  • [Presentation] フェノール分解条件下におけるComamonas thiooxydans R2株の形質不均一性と機能維持2023

    • Author(s)
      鈴木 研志, 上原 悠太郎, 水口 千穂, 栗栖 太, 二又 裕之, 野尻 秀昭
    • Organizer
      第75回日本生物工学会大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] プラスミド保持による負荷を回避するための代謝制御様式の解明2023

    • Author(s)
      日高 聖覚, 水口 千穂, 鈴木 研志, 岡田 憲典, 岡橋 伸幸, 野尻 秀昭
    • Organizer
      第75回日本生物工学会大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] セルソーターを利用したピレン分解菌の分解能を変化させる細菌の取得2023

    • Author(s)
      鈴木 仁子、Vejarano Felipe、水口 千穂、岡田 憲典、Pinyakong Onruthai、野尻 秀昭
    • Organizer
      日本農芸化学会関東支部2023年度大会
    • Related Report
      2023 Annual Research Report
  • [Presentation] Key enzyme in aerobic degradation of xenobiotic aromatic compounds2023

    • Author(s)
      Hideaki Nojiri
    • Organizer
      Thailand-Japan Collaboration Symposium: Microbial Biotechnology: Role in Environmental Sustainability
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Xenogeneic silencing: its potential to control the function of mobile genetic elements2023

    • Author(s)
      Chiho Suzuki-Minakuchi
    • Organizer
      Thailand-Japan Collaboration Symposium: Microbial Biotechnology: Role in Environmental Sustainability
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The phenotypic heterogeneity of Comamonas thiooxydans R2 contributes to the functional stability under phenol-degrading conditions2023

    • Author(s)
      Kenshi Suzuki
    • Organizer
      Thailand-Japan Collaboration Symposium: Microbial Biotechnology: Role in Environmental Sustainability
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Microcrystal fluorescence quantification to detect PAH-degrading bacteria from the environment while avoiding enrichment culture bias2023

    • Author(s)
      Felipe Vejarano
    • Organizer
      Thailand-Japan Collaboration Symposium: Microbial Biotechnology: Role in Environmental Sustainability
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Searching for bacteria which modulate Mycolicibacterium sp. PO1’s pyrene degradative ability using fluorescence-activated cell sorting2023

    • Author(s)
      Satoko Suzuki
    • Organizer
      Thailand-Japan Collaboration Symposium: Microbial Biotechnology: Role in Environmental Sustainability
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Metabolite cross-feeding contributes to stabilizing multispecies coexistence in a substrate-limiting synthetic bacterial community2023

    • Author(s)
      K. Suzuki, Y. Uehara, F. Kurisu, H. Futamata, H. Nojiri
    • Organizer
      ASM Microbe 2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Fluctuation of microbial interspecies interactions enables bacterial coexistences with dynamic equilibriums2023

    • Author(s)
      M. Honjo, K. Suzuki, F. A. A. Aziz, Y. Saito, K. Takeda, A. R. J. b. Mold Din, H. Ishizawa, M. Kimura, Y. Tashiro, H. Futamata
    • Organizer
      ASM Microbe 2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Impact of plasmid carriage on the metabolism of Pseudomonas2023

    • Author(s)
      M. Hidaka, C. Suzuki-Minakuchi, K. Suzuki, K. Okada, N. Okahashi, H. Nojiri
    • Organizer
      ASM Microbe 2023
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Molecular characterization of 3-chlorobenzoic acid (3-CBA) degradation by different bacteria isolated from soils2023

    • Author(s)
      Ifat Ara, Ryota Moriuchi, Hideo Dohra, Kazuhide Kimbara, Naoto Ogawa, Masaki Shintani.
    • Organizer
      9th International Symposium toward the Future of Advanced Researches in Shizuoka University (ISFAR-SU2023)
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 環境中でのプラスミド伝播の理解を目指した接合実験と塩基組成の比較2023

    • Author(s)
      德田 真穂、鈴木 治夫、金原 和秀、新谷 政己
    • Organizer
      第17回日本ゲノム微生物学会年会大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] プラスミド分類群IncP-1からIncP-14群の再考2023

    • Author(s)
      新谷政己,森内良太,道羅英夫,鈴木治夫,野尻秀昭,鈴木仁人
    • Organizer
      第17回日本ゲノム微生物学会年会大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] water-in-oil (w/o) dropletでPromA群プラスミドの「天然の宿主」を同定する2023

    • Author(s)
      川北鈴香,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] これまで見過ごされてきたPromA群プラスミドの性状解析2023

    • Author(s)
      白木友博,上條達哉,新谷政己,金原和秀
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 好気・嫌気条件下におけるプラスミドの伝播に違いをもたらす因子の探索2023

    • Author(s)
      野上勇魚,久野航裕,新谷政己,金原和秀
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Characterization and determination of host range of IncN plasmid carrying ARGs isolated from environmental samples2023

    • Author(s)
      Singh Shweta, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Isolation and characterization of 3-chlorobenzoate degrading bacteria from soil in shizuoka2023

    • Author(s)
      Ifat Ara, Ryota Moriuchi, Hideo Dohra, Kazuhide Kimbara, Naoto Ogawa, Masaki Shintani
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Rhodococcus qingshengii N9T-4株におけるアルカン分解機構2023

    • Author(s)
      佐藤佑香,小尾信博,吉田信行,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 新規IncP/P-1群プラスミドの性状の分子遺伝学的比較2023

    • Author(s)
      敦賀俊太,梅木穂乃果,上條遥陽,徳田真穂,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] ハイスループットな蛍光測定法によるピレン分解菌の分解能を変化させる環境細菌の探索2023

    • Author(s)
      鈴木 仁子、べハラノ フェリペ、水口 千穂、岡田 憲典、ピニャコン オルタイ、野尻 秀昭
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] ゲル充填マイクロウェルアレイデバイスによるナフタレン分解菌群の取得と解析2023

    • Author(s)
      劉 禹忻、楊 重陽、張 詩芸、水口 千穂、岡田 憲典、佐々 文洋、野尻 秀昭
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] The efficient development of various naphthalene-degrading consortia via droplet-based microfluidics2023

    • Author(s)
      CHONGYANG YANG, Yuxin LIU, Satoko MATSUKURA, Chiho SUZUKI-MINAKUCHI, Kazunori OKADA, Naohiro NODA, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 受容菌細胞上の膜タンパク質OprHは接合伝達における受容菌選択に関与する2023

    • Author(s)
      杉山 京佳、作田 郁子、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Pseudomonas resinovorans CA10株の染色体由来H-NS様タンパク質はプラスミドpCAR1の安定性に寄与する2023

    • Author(s)
      盧 梁凝、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 微小結晶蛍光測定法による一細胞技術を用いた多環芳香族化合物分解菌の取得2023

    • Author(s)
      ベハラノ フェリペ、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Impact of interspecies interactions on pyrene degradation capability within pyrene-degrading bacterial consortia2023

    • Author(s)
      Yuanhao ZHU, Felipe VEJARANO, Chiho SUZUKI-MINAKUCHI, Kazunori OKADA, Onruthai PINYAKONG, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] プラスミドの保持がPseudomonas属細菌の代謝に及ぼす影響の網羅的解析2023

    • Author(s)
      日高 聖覚、水口 千穂、鈴木 研志、岡田 憲典、岡橋 伸幸、野尻 秀昭
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] プラスミド獲得直後の細胞内応答を解析するための実験系の確立2023

    • Author(s)
      李 顔秀、西村 美郁、杉山 京佳、水口 千穂、岡田 憲典、細川 正人、竹山 春子、野尻 秀昭
    • Organizer
      日本農芸化学会2023年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 緑膿菌プラスミドの不和合性群(IncP-1~P-13)の新たな理解2023

    • Author(s)
      鈴木仁人、鈴木治夫、野尻秀昭、新谷政己
    • Organizer
      第57回緑膿菌感染症研究会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Hitherto-unnoticed self-transmissible plasmids widely distributed among different environments2022

    • Author(s)
      Masaki Shintani
    • Organizer
      18th International Symposium on Microbial Ecology
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The features of the novel IncP-1-related plasmids are different from those of the well-studied IncP-1 plasmids2022

    • Author(s)
      Honoka Umeki, Maho Tokuda, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, and Masaki Shintani
    • Organizer
      18th International Symposium on Microbial Ecology
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Oxygen increases the occurrence frequency of transconjugants of IncP-1 plasmid2022

    • Author(s)
      Kosuke Kuno, Isana Nogami, Kazuhide Kimbara, Hiroyuki Futamata, Masaki Shintani
    • Organizer
      18th International Symposium on Microbial Ecology
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Host ranges of plasmid could be predicted using genomic signature2022

    • Author(s)
      Maho Tokuda, Haruo Suzuki, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      18th International Symposium on Microbial Ecology
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Incompatibility groups of Pseudomonas plasmids revisited: comprehensive analysis of R factors belonging to IncP-1 to P-132022

    • Author(s)
      Masaki Shintani
    • Organizer
      International Symposium on Plasmid Biology 2022
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Replication-Cycle Reaction法による環境試料からのプラスミドの収集とその性状解析2022

    • Author(s)
      一瀬拓海,池田奈菜子,森光矢,奈良聖亜,末次正幸,金原和秀,新谷政己
    • Organizer
      第74回日本生物工学会大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] PromA群プラスミドの「天然の宿主」を同定するためのシングルセル解析2022

    • Author(s)
      川北鈴香,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      第74回日本生物工学会大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 新規IncP/P-1群プラスミドの接合伝達頻度を左右する因子の探索と同定2022

    • Author(s)
      梅木穂乃花,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第35回大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Rhodococcus qingshengii N9T-4株による中鎖n-アルカン代謝機構の解明2022

    • Author(s)
      小尾信博,佐藤佑香,吉田信行,新谷政己,金原和秀
    • Organizer
      日本微生物生態学会第35回大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 広宿主域を示すPromA群プラスミドの性状比較2022

    • Author(s)
      上條達哉,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第35回大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Replication-Cycle Reaction法による環境試料からのプラスミドの収集とその性状解析2022

    • Author(s)
      一瀬拓海,池田奈菜子,森光矢,奈良聖亜,末次正幸,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第35回大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Pseudomonas属細菌を宿主にしない狭宿主域型IncP/P-1群プラスミドの発見2022

    • Author(s)
      德田 真穂,上條 達哉, 梅木 穂乃花, 森内 良太, 道羅 英夫, 金原 和秀, 新谷 政己
    • Organizer
      日本微生物生態学会第35回大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 嫌気環境下でのプラスミド伝播を促進する因子の特定2022

    • Author(s)
      久野航裕,金原和秀,二又裕之,新谷政己
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Isolation, characterization, and determination of host range of IncN plasmid carrying ARGs isolated from environmental samples2022

    • Author(s)
      Singh Shweta, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 接合実験と計算によるプラスミドの宿主域の同定と比較2022

    • Author(s)
      德田真穂,上條達哉,梅木穂乃花,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 新規IncP/P-1群プラスミドの性状解析①2022

    • Author(s)
      梅木穂乃花,敦賀俊太,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] PromA群プラスミドの「天然の宿主」の同定にむけたシングルセルレベルの解析2022

    • Author(s)
      川北鈴香,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 新規IncP/P-1群プラスミドの性状解析②2022

    • Author(s)
      上條遥陽,梅木穂乃果,敦賀俊太,徳田真穂,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Binding manner of MvaT homologs in pCAR1-free and -harboring Pseudomonas putida KT24402022

    • Author(s)
      Yang Miaoyan, Suzuki-Minakuchi Chiho, Suzuki Kenshi, Vasileva Delyana, Nimura-Matsune Kaori, Matsutani Minenosuke, Watanabe Satoru, Okada Kazunori, Nojiri Hideaki
    • Organizer
      第21回東京大学生命科学シンポジウム
    • Related Report
      2022 Annual Research Report
  • [Presentation] New technologies to find and analyze the microbial interactions among the environmental bacteria2022

    • Author(s)
      Hideaki Nojiri
    • Organizer
      Thailand-Japan Collaboration Symposium: Environmental Microbial Technology for Sustainable Development
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Heterogeneity of plasmid-borne catabolic ability in bacterial populations2022

    • Author(s)
      Chiho Suzuki-Minakuchi
    • Organizer
      Thailand-Japan Collaboration Symposium: Environmental Microbial Technology for Sustainable Development
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Finding bacteria capable of altering Mycolicibacterium sp. PO1 pyrene degradation rate by microcrystal fluorescence screening2022

    • Author(s)
      Felipe Vejarano
    • Organizer
      Thailand-Japan Collaboration Symposium: Environmental Microbial Technology for Sustainable Development
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Hitherto-unnoticed self-transmissible plasmids widely distributed among different environments2022

    • Author(s)
      Masaki Shintani
    • Organizer
      Thailand-Japan Collaboration Symposium: Environmental Microbial Technology for Sustainable Development
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Bacterial coexistence under substrate limiting conditions: How do we understand a microbial ecosystem?2022

    • Author(s)
      Kenshi Suzuki
    • Organizer
      Thailand-Japan Collaboration Symposium: Environmental Microbial Technology for Sustainable Development
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Pseudomonas属細菌のプラスミド保持・非保持時におけるメタボローム解析2022

    • Author(s)
      日高聖覚、水口千穂、鈴木研志、岡田憲典、岡橋伸幸、野尻秀昭
    • Organizer
      日本農芸化学会関東支部2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Benzene oxidation in the anaerobic degradation pathway of Azoarcus sp. DN112022

    • Author(s)
      Yuanhao Zhu, Felipe Vejarano, Allan Devanadera, Chiho Suzuki-Minakuchi, Yuki Kasai, Yoh Takahata, Kazunori Okada, Hideaki Nojiri
    • Organizer
      日本農芸化学会関東支部2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] How do bacteria avoid the burden of various plasmids?2022

    • Author(s)
      Hideaki Nojiri
    • Organizer
      International Symposium on Plasmid Biology 2022
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Transcriptional heterogeneity of the catabolic genes on pCAR1 causes host-specific carbazole-degrading manner2022

    • Author(s)
      Chiho Suzuki-Minakuchi, Natsumi Yamamoto, Saki Takahira, Masataka Yamaguchi, Yutaro Takeda, Kazunori Okada, Shinsuke Shigeto, Hideaki Nojiri
    • Organizer
      International Symposium on Plasmid Biology 2022
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Metabolome analysis on plasmid-free and -harboring Pseudomonas2022

    • Author(s)
      Masaaki Hidaka, Chiho Suzuki-Minakuchi, Kenshi Suzuki, Kazunori Okada, Nobuyuki Okahashi, Hideaki Nojiri
    • Organizer
      International Symposium on Plasmid Biology 2022
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The Tip Protein of Conjugative Pilus of IncP-9 Plasmid NAH7 Contributes to the Selection of Recipients2022

    • Author(s)
      Kyoka Sugiyama, Ayako Sakuda, Chiho Suzuki-Minakuchi, Kazunori Okada, Hideaki Nojiri
    • Organizer
      International Symposium on Plasmid Biology 2022
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Function of the pCAR1-encoded MvaT homolog on the fitness of pCAR1-harboring pseudomonads2022

    • Author(s)
      Liangning Lu, Chiho Suzuki-Minakuchi, Kazunori Okada, Hideaki Nojiri
    • Organizer
      International Symposium on Plasmid Biology 2022
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 重水素標識顕微ラマン分光法を用いたピレン分解細菌コンソーシアムの1細胞レベル解析2022

    • Author(s)
      竹本芽紅, Felipe Vejarano, Yuanhao Zhu, 水口千穂, 野尻秀昭, 重藤真介
    • Organizer
      2022年度日本分光学会年次講演会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Pseudomonas属細菌のMvaTホモログがプラスミドpCAR1保持に与える影響2022

    • Author(s)
      盧 梁凝、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      第20回微生物研究会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Isolation of naphthalene-degrading bacterial consortia by the gel-filled microwell array device2022

    • Author(s)
      Yuxin LIU, Chongyang YANG, Chiho SUZUKI-MINAKUCHI, Kazunori OKADA, Fumihiro SASSA, Hideaki NOJIRI
    • Organizer
      第20回微生物研究会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 性線毛先端タンパク質に見出された接合伝達における受容菌選択機能2022

    • Author(s)
      杉山 京佳、作田 郁子、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      第20回微生物研究会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 細菌集団内の不均一性がプラスミド pCAR1 由来の分解力を決める2022

    • Author(s)
      水口千穂、山本夏実、高比良早紀、山口雅貴、武田祐太郎、岡田憲典、重藤真介、野尻秀昭
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Impact of interspecies interactions on pyrene degradation rates by pyrene-degrading bacterial consortia2022

    • Author(s)
      Yuanhao Zhu, Felipe Vejarano, Chiho Suzuki-Minakuchi, Kazunori Okada,Onruthai Pinyakong, Hideaki Nojiri
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Mycolicibacterium sp. PO1 株と相互作用してピレン分解速度を変化させる環境由来細菌の探索2022

    • Author(s)
      鈴木仁子、Vejarano Felipe、水口千穂、岡田憲典、Pinyakong Onruthai、野尻秀昭
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] プラスミドの保持がPseudomonas属細菌の代謝経路に及ぼす変化2022

    • Author(s)
      日高聖覚、水口千穂、鈴木研志、岡田憲典、岡橋伸幸、野尻秀昭
    • Organizer
      環境バイオテクノロジー学会2022年度大会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Evaluation of defined consortium in biodegradation of hydrocarbons applicable for bioremediation under climate change scenarios2022

    • Author(s)
      Kallayanee Naloka, Natthariga Laothamteep, Felipe Vejarano, Nuttapon Pombubpa, Prinpida Sonthipahnd, Chawalit Charoenpong, Kenshi Suzuki, Chiho Suzuki-Minakuchi, Masaki Shintani, Hideaki Nojiri, Onruthai Pinyakong
    • Organizer
      The 34th Annual Meeting of the Thai Society for Biotechnology and International Conference “Sustainable Bioeconomy: Challenge and Opportunities”
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] New technologies to find and analyze the microbial interactions among the environmental bacteria2022

    • Author(s)
      Hideaki Nojiri
    • Organizer
      IPREM Seminar
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Transcriptional heterogeneity of plasmid pCAR1 determines the plasmid-borne catabolic ability of the host bacteria2022

    • Author(s)
      Chiho Suzuki-Minakuchi
    • Organizer
      IPREM Seminar
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] A syntrophic metabolism of the desired bacterial consortium enhances petroleum oil removal from the simulated freshwater environment2022

    • Author(s)
      Kallayanee Naloka, Duangporn Polrit, Chanokporn Muangchinda, Honglada Toetkiattikul, Hideaki Nojiri, Onruthai Pinyakong
    • Organizer
      International Congress on Science, Technology, and Technology-Based Innovation
    • Related Report
      2022 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 微生物に関する基礎・応用研究の双方に重要なプラスミドの宿主域の解析2022

    • Author(s)
      德田真穂
    • Organizer
      第11回シーズ&ニーズビジネスマッチング研究発表会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Isolation and characterization of 3-chlorobenzoate(3-CB) degrading bacteria from soils in Shizuoka2022

    • Author(s)
      Ara Ifat
    • Organizer
      第11回シーズ&ニーズビジネスマッチング研究発表会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Comparison of host range of plasmids with different nucleotide compositions belonging to the same incompatibility group2022

    • Author(s)
      Maho Tokuda, Haruo Suzuki, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      8th International Symposium toward the Future of Advanced Researches in Shizuoka University
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Oxygen causes higher transconjugant frequency of plasmids2022

    • Author(s)
      Kosuke Kuno, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      8th International Symposium toward the Future of Advanced Researches in Shizuoka University (ISFAR-SU2022)
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Characterization of novel IncP-1 plasmids to understand their behaviors in nature2022

    • Author(s)
      Honoka Umeki, Maho Tokuda, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      8th International Symposium toward the Future of Advanced Researches in Shizuoka University (ISFAR-SU2022)
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Isolation and characterization of 3-chlorobenzoate(3-CB) degrading bacteria from soils in Shizuoka2022

    • Author(s)
      Ifat Ara,Naoto Ogawa,Kazuhide Kimbara,Ryota Moriuchi,Hideo Dohra,Masaki Shintani
    • Organizer
      8th International Symposium toward the Future of Advanced Researches in Shizuoka University (ISFAR-SU2022)
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Host range of the IncN plasmid with antibiotic resistance genes captured from environmental samples2022

    • Author(s)
      Singh Shweta, Nakamichi Koichiro, Hiroyuki Futamata, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      8th International Symposium toward the Future of Advanced Researches in Shizuoka University (ISFAR-SU2022)
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 巨大プラスミドグループIncP-2群における誤分類の是正2022

    • Author(s)
      新谷政己,鈴木治夫,野尻秀昭,鈴木仁人
    • Organizer
      第16回日本ゲノム微生物学会年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] IncP-1群プラスミドの宿主域の違いを生む因子の探索2022

    • Author(s)
      德田真穂,山田亮,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 酸素の存在がプラスミドの接合伝達頻度を変化させるメカニズムの解明2022

    • Author(s)
      久野航裕,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] プラスミドの接合伝達現象に繊維状アミロイドタンパク質の有無が及ぼす影響2022

    • Author(s)
      岩田和樹,白井浩貴,田代陽介,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] なぜPromA群プラスミドはアクセサリ遺伝子をもちにくいのか2022

    • Author(s)
      白木友博,山本雪絵,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 細菌の進化・多様化を促すIncP-1群プラスミドの宿主域や接合伝達頻度を左右する因子の探索2022

    • Author(s)
      梅木穂乃花,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 環境中の細菌からPromA群プラスミドの「天然の宿主」を同定する2022

    • Author(s)
      川北鈴香,山本雪絵,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] シングルセルレベルの解析技術を用いたプラスミドの動態解明2022

    • Author(s)
      新谷政己
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 同一不和合性群に属するプラスミドの宿主域比較2022

    • Author(s)
      德田真穂,鈴木治夫,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      第95回日本細菌学会総会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] シングルセルレベルの解析技術を用いたプラスミドの動態解明2022

    • Author(s)
      新谷政己
    • Organizer
      第95回日本細菌学会総会
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] 性線毛先端タンパク質は接合伝達における受容菌選択に関与する2022

    • Author(s)
      杉山 京佳、作田 郁子、高島 綾、河野 響、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 代謝ネットワーク形成プロセスと微生物共存2022

    • Author(s)
      鈴木 研志、上原 悠太郎、栗栖 太、野尻 秀昭
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] ミルワーム腸内細菌によるプラスチック分解2022

    • Author(s)
      増田 映旗、鈴木 研志、三條場 千寿、後藤 康之、野尻 秀昭
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] プラスミド由来のH-NS様因子が宿主細菌の集団内での生残性に与える影響2022

    • Author(s)
      盧 梁凝、高島 綾、杉山 京佳、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Emerging interspecific relationships on PAH degradation of the pyrene-degrading consortia2022

    • Author(s)
      Yuanhao ZHU, Felipe VEJARANO, Chiho SUZUKI-MINAKUCHI, Kazunori OKADA, Onruthai PINYAKONG, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] カルバゾール分解プラスミドを保持する細菌の代謝能の揺らぎの1細胞レベル検出2022

    • Author(s)
      山口 雅貴、水口 千穂、野尻 秀昭、重藤 真介
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 微生物培養用ゲル充填マイクロウェルアレイを用いたナフタレン分解菌の培養と取得2022

    • Author(s)
      岸上 佳保里、楊 重陽、水口 千穂、岡田 憲典、佐々 文洋、野尻 秀昭
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] ハイスループットな微小結晶蛍光測定法による多環芳香族化合物分解微生物群の取得2022

    • Author(s)
      ベハラノ フェリペ、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Microdroplet&#8209;based system for cultivation and acquisition of naphthalene-degrading bacteria2022

    • Author(s)
      CHONGYANG YANG, Kahori KISHIGAMI, Yuri OTA, Tetsushi SUYAMA, Masamune MORITA, Satoko MATSUKURA, Chiho SUZUKI-MINAKUCHI, Kazunori OKADA, Naohiro NODA, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] プラスミド獲得後の細菌のプラスミド保持に対する適応過程の解析2022

    • Author(s)
      高島 綾、河野 響、チャン フイティン、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2022年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 新しい技術で環境汚染物質分解微生物群集を探索する2022

    • Author(s)
      野尻 秀昭
    • Organizer
      日本生物工学会バイオインフォマティクス相談部会第五回講演会 ~大規模データとインフォマティクスが拓く未培養微生物研究~
    • Related Report
      2021 Annual Research Report
    • Invited
  • [Presentation] Plasmids in different subgroups of PromA group showed different host ranges2021

    • Author(s)
      Maho Tokuda, Haruo Suzuki, Masahiro Yuki, Moriya Ohkuma, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      Plasmids Around the Globe 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 同一不和合性群に属する塩基組成の異なるプラスミドの宿主域比較2021

    • Author(s)
      德田真穂,鈴木治夫,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      第15回細菌学若手コロッセウム
    • Related Report
      2021 Annual Research Report
  • [Presentation] 嫌気条件下での酸素への短時間曝露によるプラスミドの接合伝達頻度への影響2021

    • Author(s)
      久野航裕,越智健太郎,柳谷洸輔,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 環境中からプラスミドの「持ち主」を同定する2021

    • Author(s)
      山本雪絵,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] これまで「見過ごされてきた」広宿主域プラスミド群、PromA群プラスミドの性状比較2021

    • Author(s)
      白木友博,山本雪絵,千葉怜碧,德田真穂,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] PromA群プラスミドのoriV,oriTの特定2021

    • Author(s)
      上條達哉,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 環境から取得された新規IncP-1群プラスミドの分布調査2021

    • Author(s)
      金子健成,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 細菌の進化・多様化を促すIncP-1群プラスミドの宿主域比較2021

    • Author(s)
      梅木穂乃花,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Replication-Cycle Reaction法による環境試料からの環状DNAの収集・解析2021

    • Author(s)
      一瀬拓海,池田奈菜子,森光矢,奈良聖亜,末次正幸,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Rhodococcus属細菌による低温環境におけるA重油分解機構の解明2021

    • Author(s)
      小尾信博,三好佑奈,吉田信行,新谷政己,金原和秀
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 細菌が作る繊維状アミロイドタンパク質がプラスミドの接合伝達に及ぼす影響2021

    • Author(s)
      岩田和樹,白井浩貴,田代陽介,金原和秀,新谷政己
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 環境中からPromA群プラスミドの「オリジナル宿主」を同定する2021

    • Author(s)
      山本雪絵,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      日本農芸化学会中部支部第190回例会
    • Related Report
      2021 Annual Research Report
  • [Presentation] これまで見過ごされてきた広宿主域PromA群プラスミドの性状分析2021

    • Author(s)
      山本雪絵,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      第73回日本生物工学会大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 異なる酸素濃度がもたらすプラスミドの接合伝達頻度と宿主域への影響2021

    • Author(s)
      久野航裕,越智健太郎,柳谷洸輔,德田真穂,水口千穂,野尻秀昭,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      第73回日本生物工学会大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] PromA群に属する新たな広宿主域プラスミドベクターの構築2021

    • Author(s)
      上條達哉,金原和秀,新谷政己
    • Organizer
      第73回日本生物工学会大会
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 湖底泥試料からPromA群プラスミドの「オリジナル宿主」を同定する2021

    • Author(s)
      山本雪絵,陶山哲志,髙木妙子,大田悠里,野田尚宏,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第34回大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 細菌の進化・多様化を促すIncP-1群プラスミドの宿主域比較2021

    • Author(s)
      梅木穂乃花,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第34回大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 同一不和合性群に属し塩基組成の異なるプラスミドの宿主域比較2021

    • Author(s)
      德田真穂,鈴木治夫,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第34回大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Replication-Cycle Reaction法による環境試料からの環状DNAの収集・解析2021

    • Author(s)
      一瀬拓海,池田奈菜子,森光矢,奈良聖亜,末次正幸,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第34回大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 異なる温度条件下におけるPromA群プラスミドの動態比較2021

    • Author(s)
      千葉怜碧,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会第34回大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Isolation and characterization of 3-chlorobenzoate degrading bacteria from soil in Shizuoka2021

    • Author(s)
      Ifat Ara,Naoto Ogawa,Kazuhide Kimbara,Ryota Moriuchi,Hideo Dohra,Masaki Shintani
    • Organizer
      12th ISAJ Annual hybrid Symposium-27Nov,2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Host range of the IncN plasmid with antibiotic resistance genes captured from environmental samples2021

    • Author(s)
      Singh Shweta, Nakamichi Koichiro, Hiroyuki Futamata, Kazuhide Kimbara, Masaki Shintani
    • Organizer
      12th ISAJ Annual hybrid Symposium-27Nov,2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Adaptation process of host to plasmid carriage revealed by transcriptome analysis2021

    • Author(s)
      Aya Takashima, Huiting Zhang, Hibiki Kawano, Chiho Suzuki-Minakuchi, Kazunori Okada, Hideaki Nojiri
    • Organizer
      Plasmids Around the Globe 2021
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Transcriptional Fluctuation of Catabolic Genes of a Plasmid Results in the Variation of Catabolic Activities at Single-Cell Level in Host Bacterial Population2021

    • Author(s)
      C. Suzuki-Minakuchi, N. Yamamoto, S. Takahira, M. Yamaguchi, Y. Takeda, K. Okada, S. Shigeto, H. Nojiri
    • Organizer
      World Microbe Forum
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Fluctuation of Bacterial Interactions Enables Coexistence of Different Bacterial Strains in Chemostat Conditions2021

    • Author(s)
      M. Honjo, K. Suzuki, K. Amano, Y. Saito, K. Takeda, M. Kimura, H. Ishizawa, Y. Tashiro, H. Futamata
    • Organizer
      World Microbe Forum
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Collapse of Phenol-utilizing Bacterium Comamonas testosteroni Strain R2 Under a Chemostat Condition Supplied with Phenol as Sole Carbon Source2021

    • Author(s)
      A. Mohd Din, K. Suzuki, K. Amano, M. Kimura, H. Ishizawa, Y. Tashiro, H. Futamata
    • Organizer
      World Microbe Forum
    • Related Report
      2021 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 基質競合下における微生物間代謝ネットワーク形成と多種共存2021

    • Author(s)
      鈴木 研志、上原 悠太郎、栗栖 太、野尻 秀昭
    • Organizer
      日本農芸化学会関東支部2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] プラスミド獲得直後の宿主で起きる遺伝子発現の経時的解析2021

    • Author(s)
      高島 綾、Zhang Huiting、河野 響、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Water-in-oilドロップレット培養の多環芳香族炭化水素分解菌群取得への応用2021

    • Author(s)
      岸上 佳保里、楊 重陽、大田 悠里、森田 雅宗、松倉 智子、陶山 哲志、水口 千穂、岡田 憲典、野田 尚宏、野尻 秀昭
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 微生物群集の創造に向けた共存系における微生物間相互作用の理解2021

    • Author(s)
      本荘雅宏、鈴木研志、天野光喜、齋藤保久、武田和宏、木村元彦、石澤秀紘、田代陽介、二又裕之
    • Organizer
      環境バイオテクノロジー学会2021年度大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 基質競合下における代謝ネットワークの進化と微生物共存2021

    • Author(s)
      鈴木研志, 上原悠太郎, 栗栖太, 野尻秀昭
    • Organizer
      第73回日本生物工学会大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] ケモスタット培養系における微生物間相互作用の揺らぎが生み出す異属三菌株の共存機構2021

    • Author(s)
      本荘 雅宏, 鈴木 研志, 天野 光喜, 齋藤 保久, 武田 和宏, 木村 元彦 , 石澤 秀紘, 田代 陽介, 二又 裕之
    • Organizer
      第73回日本生物工学会大会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 細菌間の接合伝達におけるプラスミドの受容菌選択機構の解明2021

    • Author(s)
      杉山 京佳、作田 郁子、高島 綾、河野 響、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      第19回微生物研究会
    • Related Report
      2021 Annual Research Report
  • [Presentation] Impact on pyrene degradation by differential interspecies interactions within pyrene-degrading consortia2021

    • Author(s)
      Yuanhao Zhu, Felipe Vejarano, Chiho Suzuki-Minakuchi, Kazunori Okada, Hideaki Nojiri
    • Organizer
      第19回微生物研究会
    • Related Report
      2021 Annual Research Report
  • [Presentation] プラスミドpCAR1にコードされるH-NS様タンパク質Pmrが宿主の細菌集団内での生残性に与える影響の評価2021

    • Author(s)
      盧 梁凝、高島 綾、杉山 京佳、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      第19回微生物研究会
    • Related Report
      2021 Annual Research Report
  • [Presentation] オイル相からの基質供給によるwater-in-oilドロップレットを用いたナフタレン分解菌群の取得2021

    • Author(s)
      岸上 佳保里、楊 重陽、大田 悠里、森田 雅宗、松倉 智子、陶山 哲志、水口 千穂、岡田 憲典、野田 尚宏、野尻 秀昭
    • Organizer
      第19回微生物研究会
    • Related Report
      2021 Annual Research Report
  • [Presentation] プラスミド獲得後の細菌はどのようにプラスミド保持に適応するのか?2021

    • Author(s)
      高島 綾、Zhang Huiting、河野 響、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      極限環境生物学会2021年度年会
    • Related Report
      2021 Annual Research Report
  • [Presentation] 非選択条件でも利用可能な宿主ベクター系を進化させて作る2021

    • Author(s)
      中村泰輔、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Pseudomonas属細菌由来のMvaT ホモログが形成する核様体構造の解析2021

    • Author(s)
      津島和生,角埜裕基,水口千穂,尾花 望, 野村暢彦, 岡田憲典,野尻秀昭
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] プラスミド獲得直後の宿主はどのような細胞内応答を示すのか?2021

    • Author(s)
      高島 綾、Zhang Huiting、河野 響、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      第15回日本ゲノム微生物学会年会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Source of oxygen in the phenol formation from benzene by nitrate-reducing Azoarcus sp. DN112021

    • Author(s)
      Allan DEVANADERA, Chiho SUZUKI-MINAKUCHI, Yuki KASAI, Yoh TAKAHATA, Kazunori OKADA, Hideaki NOJIR
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] A novel gene cluster is involved in the degradation of lignin-derived monoaromatics in Thermus oshimai JL-22021

    • Author(s)
      Joydeep CHAKRABORTY, Chiho SUZUKI-MINAKUCHI, Takeo TOMITA, Kazunori OKADA, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 硫黄代謝を司る転写制御因子 CysB がプラスミド非感受性の鍵因子である2021

    • Author(s)
      河野 響、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Discrimination of plasmid-harboring and -free strains using single-cell Raman Spectroscopy2021

    • Author(s)
      Huiting Zhang, Chiho Suzuki-Minakuchi, Motomu Matsui, Masataka Yamaguchi, Misaki Kawato, Nanako Kanno, Kazunori Okada, Wataru Iwasaki, Shinsuke Shigeto, Hideaki Nojiri
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 細菌は接合伝達で獲得したプラスミドにどのように「順応」するのか?2021

    • Author(s)
      水口 千穂、野尻 秀昭
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Replication-Cycle Reaction法による環境試料中の環状DNAの検出とその塩基配列の解読2021

    • Author(s)
      森光矢,奈良聖亜,末次正幸,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 多摩川流域における薬剤耐性遺伝子の伝播を担うプラスミドの収集と比較2021

    • Author(s)
      中道孝一朗,金子健成,森光矢,森内良太,道羅英夫,金原和秀,二又裕之,新谷 政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 環境中を伝播する新規IncP-1群様プラスミドの取得とその分布2021

    • Author(s)
      金子健成,中道孝一朗,森内良太,道羅英夫,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] IncP-1群プラスミドのα,βサブグループにおける接合伝達性の変化に関与する因子の探索2021

    • Author(s)
      岩田和樹,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] IncP-1群プラスミドにおけるtrbO遺伝子の機能解析2021

    • Author(s)
      山田亮,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 日本各地から取得した自己伝達性IncPromA群プラスミドの特徴の解明2021

    • Author(s)
      山本雪絵,金子健成,中道孝一朗,早川雅也,森内良太,道羅英夫,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] IncPromA群に属するプラスミドの異なる温度条件下での挙動の比較2021

    • Author(s)
      千葉怜碧,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 同一不和合性群に属する塩基組成の異なるプラスミドの宿主域比較2021

    • Author(s)
      德田真穂,鈴木治夫,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] どのプラスミドが,どのようなときに,どこからどこに移るのだろうか2021

    • Author(s)
      新谷政己
    • Organizer
      日本農芸化学会2021年度大会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] 接合伝達は細胞に何を起こすのか2021

    • Author(s)
      野尻秀昭
    • Organizer
      (公財)大隅基礎科学創成財団 微生物コンソーシアム第1回全体会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] New insights of broad host range plasmids belonging to the IncP and PromA groups2021

    • Author(s)
      Masaki Shintani
    • Organizer
      Special lecture in Chulalongkorn University
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] プラスミドの宿主の適応度(fitness)を変化させる因子の探索と同定2020

    • Author(s)
      森光矢,一瀬拓海,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 環境中からの新規IncP-1群プラスミドの取得2020

    • Author(s)
      金子健成,中道孝一朗,森内良太,道羅英夫,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] IncP-1群プラスミドにおけるtrbO遺伝子の機能解析2020

    • Author(s)
      山田亮,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 異なるIncPromA群プラスミドの全塩基配列比較2020

    • Author(s)
      山本雪絵,早川雅也,森内良太,道羅英夫,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] Replication-Cycle Reaction法による環境試料中の環状DNAの検出とその塩基配列の解読2020

    • Author(s)
      森光矢,奈良聖亜,末次正幸,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 不和合性群IncPromA群に属するプラスミドの異なる温度条件下における挙動の比較2020

    • Author(s)
      千葉怜碧,德田真穂,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 薬剤耐性遺伝子の伝播に寄与するプラスミドの収集2020

    • Author(s)
      中道 孝一朗, 金子 健成,森 光矢 , 森内 良太, 道羅 英夫, 金原 和秀 , 二又 裕之, 新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] 様々な微生物間におけるプラスミドの 伝播現象に影響を及ぼす因子の探索2020

    • Author(s)
      新谷政己
    • Organizer
      日本進化学会第22回オンライン大会
    • Related Report
      2020 Annual Research Report
    • Invited
  • [Presentation] Novel plasmids were isolated from natural environmental sampoles using Replication-Cycle Reaction (RCR)2020

    • Author(s)
      Mori M, Nara S, Su'etsugu, M, Kimbara K, Shintani M.
    • Organizer
      FEMS 2020 Online Conference
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Plasmids with different nucleotide compositions showed different host ranges2020

    • Author(s)
      Tokuda M, Suzuki H, Yuki M, Ohkuma M, Kimbara K, Shintani M.
    • Organizer
      FEMS 2020 Online Conference
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Broad host range IncPromA group plasmids were widely distributed around different environments2020

    • Author(s)
      Yamamoto Y, Hayakawa M, Moriuchi R, Dora H, Kimbara K, Shintani M.
    • Organizer
      FEMS 2020 Online Conference
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 環境細菌にプラスミド非感受性を与える転写制御ネットワークの解明2020

    • Author(s)
      河野響, 水口千穂, 岡田憲典, 野尻秀昭
    • Organizer
      第20回東京大学生命科学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] H-NSファミリータンパク質の転写制御対象遺伝子はプラスミド保持に伴い劇的に変化する2020

    • Author(s)
      中村泰輔, 河野響, 兼崎友, 川崎信治, 水口千穂, 岡田憲典, 野尻秀昭
    • Organizer
      第20回東京大学生命科学シンポジウム
    • Related Report
      2020 Annual Research Report
  • [Presentation] Diversity and Recruitment History of Catabolic Genes among Nine Carbazole-degrading Bacteria2020

    • Author(s)
      F. Vejarano, C. Suzuki-Minakuchi, Y. Ohtsubo, M. Tsuda, K. Okada, H. Nojiri
    • Organizer
      ASM Microbe online
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The Benzene-degrading Nitrate-reducing Azoarcus sp. DN11 Employs Hydroxylation Route as Initial Reaction in Anaerobic Benzene Degradation Pathway2020

    • Author(s)
      Allan DEVANADERA, Chiho SUZUKI-MINAKUCHI, Yuki KASAI, Yoh TAKAHATA, Kazunori OKADA, Hideaki NOJIRI
    • Organizer
      ASM Microbe online
    • Related Report
      2020 Annual Research Report
    • Int'l Joint Research
  • [Presentation] カルバゾール分解プラスミドpCAR1由来のTAシステムは他のプラスミドの安定化に寄与する2020

    • Author(s)
      高島 綾、河野 響、上田 朋美、中村 泰輔、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会関東支部2020年度大会
    • Related Report
      2020 Annual Research Report
  • [Presentation] “Backup”だけではない-プラスミド由来H-NS様因子の機能-2020

    • Author(s)
      中村泰輔、河野響、兼崎友、川崎信治、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      第14回日本ゲノム微生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Pseudomonas属細菌由来の核様体タンパク質NdpAにおける多量体化ドメインの探索2020

    • Author(s)
      佐道陽弘、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      第14回日本ゲノム微生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 同一不和合性群に属していながら塩基組成の異なるプラスミドの宿主域比較2020

    • Author(s)
      德田真穂,千葉怜碧,雪真弘,大熊盛也,水口千穂,野尻秀昭,金原和秀,新谷政己
    • Organizer
      第14回日本ゲノム微生物学会年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] プラスミド・宿主染色体由来のMvaTホモログのDNA結合能の評価2020

    • Author(s)
      津島 和生、角埜 裕基、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Comparison of novel genome sequences reveal gene recruitment mechanisms of catabolic genes among nine diverse carbazole-degrading bacteria.2020

    • Author(s)
      Felipe VEJARANO, Chiho SUZUKI-MINAKUCHI, Yoshiyuki OHTSUBO, Masataka TSUDA, Kazunori OKADA, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] プラスミドの受容菌認識における外膜タンパク質OprHの機能解析2020

    • Author(s)
      作田 郁子、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] IncP-7群プラスミドpCAR1上に新たに見出されたTAシステムの機能解析2020

    • Author(s)
      高島 綾、河野 響、上田 朋美、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] H-NSファミリータンパク質のレギュロンはプラスミド保持に伴い劇的に変化する2020

    • Author(s)
      中村泰輔、河野響、兼崎友、川崎信治、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 細菌にプラスミドへの非感受性を与える転写制御ネットワークの解明2020

    • Author(s)
      河野 響、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Azoxystrobin transformation by Bacillus licheniformis strain TAB7 produces azoxystrobin amine as novel metabolite2020

    • Author(s)
      Amirah ALIAS, Enock MPOFU, Keisuke TOMITA, Chiho SUZUKI-MINAKUCHI, Kenji TOMITA, Joydeep CHAKRABORTY, Michal MALON, Yusuke OGURA, Hirosato TAKIKAWA, Kazunori OKADA, Toshiaki KIMURA, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 染色体由来の転写制御因子がプラスミドpCAR1上の分解遺伝子群の発現を一細胞レベルで変化させる2020

    • Author(s)
      武田祐太郎、山本夏実、高比良早紀、水口 千穂、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Transcriptomic analysis of benzene-degrading nitrate-reducing Azoarcus sp. DN11 reveals the involvement of hydroxylation as initial reaction in anaerobic benzene degradation pathway.2020

    • Author(s)
      Allan DEVANADERA, Chiho SUZUKI-MINAKUCHI, Yuki KASAI, Yoh TAKAHATA, Kazunori OKADA, Hideaki NOJIRI
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Pseudomonas属細菌のH-NSファミリータンパク質における翻訳後修飾部位の同定2020

    • Author(s)
      ヴァシレヴァ デリアナ、水口 千穂、孫 悦、古園 さおり、吉田 稔、岡田 憲典、野尻 秀昭
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 同一不和合性群に属するプラスミドであってもその宿主域は異なる2020

    • Author(s)
      德田真穂, 千葉怜碧, 井上謙吾, 雪真弘, 大熊盛也, 水口千穂, 野尻秀昭, 金原和秀, 新谷政己
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 自己伝達性プラスミドが可動性プラスミドを伝達させる能力の比較2020

    • Author(s)
      早川雅也, 山本雪絵, 金原和秀, 新谷政己
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Replication-Cycle Reaction (RCR) 法を利用した環境試料内に存在する環状プラスミドDNAの増幅とその塩基配列の解読2020

    • Author(s)
      森光矢,奈良聖亜,末次正幸,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 日本各地の環境試料からのIncPromA群プラスミドの収集と比較2020

    • Author(s)
      山本雪絵,金子健成,早川雅也,森内良太,道羅英夫,金原和秀,新谷 政己
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 薬剤耐性遺伝子の伝播に寄与しうるプラスミドの収集2020

    • Author(s)
      中道孝一朗,森光矢,金原和秀,新谷政己
    • Organizer
      日本農芸化学会2020年度大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] プラスミドによる複合微生物系の制御を目指して ~複合微生物系におけるプラスミドの動態~2019

    • Author(s)
      新谷政己
    • Organizer
      第71回日本生物工学会大会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 同一不和合性群に属するプラスミドであってもその宿主域は異なる2019

    • Author(s)
      德田真穂,柳谷洸輔,井上謙吾,雪真弘,大熊盛也,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会 山梨大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 複合微生物系で実際に伝播するPromA群プラスミドの取得と解析2019

    • Author(s)
      早川雅也,前島由明,金子健成,山本雪絵,森内良太,道羅英雄,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会 山梨大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 環境由来の微生物群集からの薬剤耐性プラスミドの取得とその解析2019

    • Author(s)
      森光矢,早川雅也,中道孝一朗,前島由明,仲田裕貴,森内良太,道羅英夫,金原和秀,新谷政己
    • Organizer
      日本微生物生態学会 山梨大会
    • Related Report
      2019 Annual Research Report
  • [Presentation] 環境中を真に伝播しているプラスミドの同定とその伝播経路の解明に向けて2019

    • Author(s)
      新谷政己
    • Organizer
      2019年度(令和元年度)国立遺伝学研究所 研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 接合伝達性プラスミドの二面性~遺伝情報の保存装置と進化駆動装置~2019

    • Author(s)
      野尻秀昭
    • Organizer
      2019年度(令和元年度)国立遺伝学研究所 研究会
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] 環境中の微生物群集内における プラスミド伝播の実態の解明に向けて2019

    • Author(s)
      新谷政己
    • Organizer
      微生物ウイーク2019 企画シンポジウム
    • Related Report
      2019 Annual Research Report
    • Invited
  • [Presentation] H-NSファミリータンパク質が制御する遺伝子群はプラスミド保持に伴い劇的に変化する2019

    • Author(s)
      中村泰輔、河野響、兼崎友、川崎信治、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      第18回微生物研究会
    • Related Report
      2019 Annual Research Report
  • [Presentation] H-NSファミリータンパク質の塩基配列嗜好性とそのメカニズムの解析2019

    • Author(s)
      津島和生、角埜裕基、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      第18回微生物研究会
    • Related Report
      2019 Annual Research Report
  • [Presentation] プラスミド上の芳香族化合物分解遺伝子群の発現が細菌集団中で多様化するメカニズムの解析2019

    • Author(s)
      武田祐太郎、山本夏実、高比良早紀、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      第18回微生物研究会
    • Related Report
      2019 Annual Research Report
  • [Presentation] プラスミドpCAR1上のカルバゾール分解遺伝子群の発現が細菌集団中で多様化するメカニズムの解析2019

    • Author(s)
      武田祐太郎、山本夏実、高比良早紀、水口千穂、岡田憲典、野尻秀昭
    • Organizer
      極限環境生物学会2019年度(第20回)年会
    • Related Report
      2019 Annual Research Report
  • [Presentation] Pseudomonas resinovorans CA10dm4 shows the novel trait “plasmid-insensitivity”.2019

    • Author(s)
      Hibiki Kawano, Tomomi Ueda, Chiho Suzuki-Minakuchi, Kazunori Okada, Hideaki Nojiri
    • Organizer
      ASM Microbe 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Pseudomonas resinovorans CA10dm4 shows insensitivity to various plasmids: Its role in the host genome evolution.2019

    • Author(s)
      Hideaki Nojiri
    • Organizer
      International Congress of the Malaysian Society for Microbiology 2019
    • Related Report
      2019 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Pseudomonas resinovorans CA10dm4 shows insensitivity to various plasmids: Its role in the host genome evolution2019

    • Author(s)
      Hideaki Nojiri
    • Organizer
      第42回日本分子生物学会年会公募ワークショップ「微生物の水平伝播からゲノム進化を考える」
    • Related Report
      2019 Annual Research Report
    • Invited

URL: 

Published: 2019-07-04   Modified: 2025-01-30  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi