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Diversity, generality, and mechanisms of noncanonical translation dynamics

Planned Research

Project AreaMultifaceted Proteins: Expanding and Transformative Protein World
Project/Area Number 20H05925
Research Category

Grant-in-Aid for Transformative Research Areas (A)

Allocation TypeSingle-year Grants
Review Section Transformative Research Areas, Section (III)
Research InstitutionInstitute of Science Tokyo

Principal Investigator

Taguchi Hideki  東京科学大学, 総合研究院, 教授 (40272710)

Co-Investigator(Kenkyū-buntansha) 茶谷 悠平  岡山大学, 環境生命自然科学学域, 准教授 (30794383)
Project Period (FY) 2020-11-19 – 2025-03-31
Project Status Completed (Fiscal Year 2024)
Budget Amount *help
¥196,950,000 (Direct Cost: ¥151,500,000、Indirect Cost: ¥45,450,000)
Fiscal Year 2024: ¥34,580,000 (Direct Cost: ¥26,600,000、Indirect Cost: ¥7,980,000)
Fiscal Year 2023: ¥34,970,000 (Direct Cost: ¥26,900,000、Indirect Cost: ¥8,070,000)
Fiscal Year 2022: ¥34,970,000 (Direct Cost: ¥26,900,000、Indirect Cost: ¥8,070,000)
Fiscal Year 2021: ¥33,280,000 (Direct Cost: ¥25,600,000、Indirect Cost: ¥7,680,000)
Fiscal Year 2020: ¥59,150,000 (Direct Cost: ¥45,500,000、Indirect Cost: ¥13,650,000)
Keywords翻訳 / リボソーム / フォールディング / 新生鎖 / タンパク質 / 非典型的な翻訳 / RAN翻訳 / 翻訳バイパス / プロテオミクス / 新生ポリペプチド鎖
Outline of Research at the Start

本計画研究では、非典型的な翻訳の普遍性、分子機構、細胞内での動態、機能などを解析することで、マルチファセットなタンパク質の世界の一端を解明することを目的として以下の研究を実施する。研究1.新生鎖に依存したリボソーム不安定化の普遍性と分子機構。本年度は、翻訳途中終了の大腸菌での分子機構解析、真核生物への拡張とその分子機構を調べる。研究2.非典型的な翻訳から産まれるタンパク質の多様性。本年度は、大腸菌で見つかった翻訳バイパス現象の特徴付けを行う。研究3.非典型的な翻訳過程の分子機構。本年度は、非典型的な翻訳として塩基リピート病に関連した非ATG翻訳の再構成系や生細胞内での可視化技術を構築する。

Outline of Final Research Achievements

In this research project, we aimed to investigate the diversity, generality, and mechanisms of recently emerged noncanonical translation dynamics, and obtained the following results. (Aim 1) Universality and molecular mechanism of ribosome instability dependent on newborn chains: After the discovery of the phenomenon in E. coli in which acidic residue-rich nascent chains destabilize translating ribosome (IRD), we found that a similar phenomenon can occur in eukaryotes, elucidated part of the molecular mechanism, and searched for factors that alleviate IRD. (Aim 2) We developed a method to search for new proteins that are not confined to known ORFs. (Aim 3) We investigated the molecular mechanisms and cellular dynamics of disease-associated noncanonical translation (RAN translation).

Academic Significance and Societal Importance of the Research Achievements

翻訳研究やタンパク質フォールディング研究には長い歴史があるが、種々のオミクス解析を含む技術の進歩もあって、従来の常識が大きく更新されつつある。本研究は、翻訳やフォールディングに関して、私たちのこれまでの研究の蓄積や最近の発見をベースとして、新たな展開を図った。5年間の研究を通して、本学術変革領域研究(A)の領域コンセプトに合致した研究を遂行し、翻訳やフォールディングの新たな常識の一端の確立に貢献できた。また、非典型的な翻訳や翻訳時フォールディングの破綻は種々の疾患にも関与していることが近年急速に明らかになってきており、そのような疾患への創薬や治療戦略の策定にも役立つことが期待できる。

Report

(6 results)
  • 2024 Annual Research Report   Final Research Report ( PDF )
  • 2023 Annual Research Report
  • 2022 Annual Research Report
  • 2021 Annual Research Report
  • 2020 Annual Research Report
  • Research Products

    (84 results)

All 2025 2024 2023 2022 2021 2020 Other

All Int'l Joint Research (2 results) Journal Article (33 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 33 results,  Open Access: 19 results) Presentation (49 results) (of which Int'l Joint Research: 15 results,  Invited: 8 results)

  • [Int'l Joint Research] コロラド州立大学(米国)

    • Related Report
      2022 Annual Research Report
  • [Int'l Joint Research] コロラド州立大学(米国)

    • Related Report
      2021 Annual Research Report
  • [Journal Article] A mini-hairpin shaped nascent peptide blocks translation termination by a distinct mechanism2025

    • Author(s)
      Ando Yushin、Kobo Akinao、Niwa Tatsuya、Yamakawa Ayako、Konoma Suzuna、Kobayashi Yuki、Nureki Osamu、Taguchi Hideki、Itoh Yuzuru、Chadani Yuhei
    • Journal Title

      Nature Communications

      Volume: 16 Issue: 1 Pages: 2323-2323

    • DOI

      10.1038/s41467-025-57659-z

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Dissecting the mechanism of NOP56 GGCCUG repeat-associated non-AUG translation using cell-free translation systems2025

    • Author(s)
      Hasumi Mayuka、Ito Hayato、Machida Kodai、Niwa Tatsuya、Taminato Tomoya、Nagai Yoshitaka、Imataka Hiroaki、Taguchi Hideki
    • Journal Title

      Journal of Biological Chemistry

      Volume: 301 Issue: 4 Pages: 108360-108360

    • DOI

      10.1016/j.jbc.2025.108360

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Revival of the Escherichia coli heat shock response after two decades with a small Hsp in a critical but distinct act2025

    • Author(s)
      Miwa Tsukumi、Taguchi Hideki
    • Journal Title

      Biological Chemistry

      Volume: 406 Issue: 1-2 Pages: 29-33

    • DOI

      10.1515/hsz-2024-0140

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] On the pursuit to reconstitute the <i>Escherichia coli</i> ribosome from purified components2024

    • Author(s)
      Taguchi Hideki
    • Journal Title

      The Journal of Biochemistry

      Volume: 175 Issue: 5 Pages: 521-523

    • DOI

      10.1093/jb/mvad121

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The ABCF proteins in <i>Escherichia coli</i> individually cope with ‘hard-to-translate’ nascent peptide sequences2024

    • Author(s)
      Chadani Yuhei、Yamanouchi Shun、Uemura Eri、Yamasaki Kohei、Niwa Tatsuya、Ikeda Toma、Kurihara Miku、Iwasaki Wataru、Taguchi Hideki
    • Journal Title

      Nucleic Acids Research

      Volume: 52 Issue: 10 Pages: 5825-5840

    • DOI

      10.1093/nar/gkae309

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nonspecific N-terminal tetrapeptide insertions disrupt the translation arrest induced by ribosome-arresting peptide sequences2024

    • Author(s)
      Kobo Akinao、Taguchi Hideki、Chadani Yuhei
    • Journal Title

      Journal of Biological Chemistry

      Volume: 300 Issue: 6 Pages: 107360-107360

    • DOI

      10.1016/j.jbc.2024.107360

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Reconstituted Cell-free Translation Systems for Exploring Protein Folding and Aggregation2024

    • Author(s)
      Taguchi Hideki、Niwa Tatsuya
    • Journal Title

      Journal of Molecular Biology

      Volume: 436 Issue: 19 Pages: 168726-168726

    • DOI

      10.1016/j.jmb.2024.168726

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed
  • [Journal Article] STALL-seq: mRNA-display selection of bacterial and eukaryotic translational arrest sequences from large random-sequence libraries2024

    • Author(s)
      Hamano Tadashi、Nagumo Yu、Umehara Tomofumi、Hirono Kota、Fujiwara Kei、Taguchi Hideki、Chadani Yuhei、Doi Nobuhide
    • Journal Title

      Journal of Biological Chemistry

      Volume: 300 Issue: 12 Pages: 107978-107978

    • DOI

      10.1016/j.jbc.2024.107978

    • Related Report
      2024 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A method to enrich polypeptidyl-tRNAs to capture snapshots of translation in the cell2023

    • Author(s)
      Yamakawa Ayako、Niwa Tatsuya、Chadani Yuhei、Kobo Akinao、Taguchi Hideki
    • Journal Title

      Nucleic Acids Research

      Volume: 51 Issue: 5 Pages: e30-e30

    • DOI

      10.1093/nar/gkac1276

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nascent chain-mediated translation regulation in bacteria: translation arrest and intrinsic ribosome destabilization2023

    • Author(s)
      Chiba Shinobu、Fujiwara Keigo、Chadani Yuhei、Taguchi Hideki
    • Journal Title

      The Journal of Biochemistry

      Volume: 173 Issue: 4 Pages: 227-236

    • DOI

      10.1093/jb/mvad007

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed
  • [Journal Article] FUS regulates RAN translation through modulating the G-quadruplex structure of GGGGCC repeat RNA in C9orf72-linked ALS/FTD2023

    • Author(s)
      Fujino Yuzo、Ueyama Morio、Ishiguro Taro、Ozawa Daisaku、Sugiki Toshihiko、Ito Hayato、Murata Asako、Ishiguro Akira、Gendron Tania F.、Mori Kohji、Tokuda Eiichi、Taminato Tomoya、Konno Takuya、Koyama Akihide、Kawabe Yuya et al.
    • Journal Title

      eLife

      Volume: 12

    • DOI

      10.7554/elife.84338.1

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Escherichia coli small heat shock protein IbpA plays a role in regulating the heat shock response by controlling the translation of σ 322023

    • Author(s)
      Tsukumi Miwa, Hideki Taguchi
    • Journal Title

      Proc Natl Acad Sci U S A .

      Volume: 120 Issue: 32

    • DOI

      10.1073/pnas.2304841120

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The mRNA binding-mediated self-regulatory function of small heat shock protein IbpA in γ-proteobacteria is conferred by a conserved arginine.2023

    • Author(s)
      Cheng Y, Miwa T, Taguchi H.
    • Journal Title

      J Biol Chem.

      Volume: 299 Issue: 9 Pages: 105108-105108

    • DOI

      10.1016/j.jbc.2023.105108

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mechanistic dissection of premature translation termination induced by acidic residues-enriched nascent peptide2023

    • Author(s)
      Chadani Yuhei、Kanamori Takashi、Niwa Tatsuya、Ichihara Kazuya、Nakayama Keiichi I.、Matsumoto Akinobu、Taguchi Hideki
    • Journal Title

      Cell Reports

      Volume: 42 Issue: 12 Pages: 113569-113569

    • DOI

      10.1016/j.celrep.2023.113569

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Reconstitution of C9orf72 GGGGCC repeat-associated non-AUG translation with purified human translation factors.2023

    • Author(s)
      Ito H., Machida K., Ueyama M., Nagai Y., Imataka H., Taguchi H.
    • Journal Title

      Sci. Rep.

      Volume: 13(1) Issue: 1 Pages: 22826-22826

    • DOI

      10.1038/s41598-023-50188-z

    • Related Report
      2023 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Prophage excision switches the primary ribosome rescue pathway and rescue‐associated gene regulations in Escherichia coli2022

    • Author(s)
      Onodera Haruka、Niwa Tatsuya、Taguchi Hideki、Chadani Yuhei
    • Journal Title

      Molecular Microbiology

      Volume: 119 Issue: 1 Pages: 44-58

    • DOI

      10.1111/mmi.15003

    • Related Report
      2023 Annual Research Report 2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nascent peptide-induced translation discontinuation in eukaryotes impacts biased amino acid usage in proteomes2022

    • Author(s)
      Ito Yosuke、Chadani Yuhei、Niwa Tatsuya、Yamakawa Ayako、Machida Kodai、Imataka Hiroaki、Taguchi Hideki
    • Journal Title

      Nature Communications

      Volume: 13 Issue: 1 Pages: 7451-7451

    • DOI

      10.1038/s41467-022-35156-x

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Amyloid conformation-dependent disaggregation in a reconstituted yeast prion system2022

    • Author(s)
      Nakagawa Y, Shen HC, Komi Y, Sugiyama S, Kurinomaru T, Tomabechi Y, Krayukhina E, Okamoto K, Yokoyama T, Shirouzu M, Uchiyama S, Inaba M, Niwa T, Sako Y, Taguchi H, Tanaka M
    • Journal Title

      Nat Chem Biol.

      Volume: 18 Issue: 3 Pages: 321-331

    • DOI

      10.1038/s41589-021-00951-y

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Intracellular photocatalytic-proximity labeling for profiling protein?protein interactions in microenvironments2022

    • Author(s)
      Tsushima Michihiko、Sato Shinichi、Miura Kazuki、Niwa Tatsuya、Taguchi Hideki、Nakamura Hiroyuki
    • Journal Title

      Chemical Communications

      Volume: 58 Issue: 12 Pages: 1926-1929

    • DOI

      10.1039/d1cc05764b

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conversion of a PROTAC Mutant Huntingtin Degrader into Small-Molecule Hydrophobic Tags Focusing on Drug-like Properties2022

    • Author(s)
      Hirai Keigo、Yamashita Hiroko、Tomoshige Shusuke、Mishima Yugo、Niwa Tatsuya、Ohgane Kenji、Ishii Mayumi、Kanamitsu Kayoko、Ikemi Yui、Nakagawa Shinsaku、Taguchi Hideki、Sato Shinichi、Hashimoto Yuichi、Ishikawa Minoru
    • Journal Title

      ACS Medicinal Chemistry Letters

      Volume: 13 Issue: 3 Pages: 396-402

    • DOI

      10.1021/acsmedchemlett.1c00500

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] BODIPY Catalyzes Proximity‐Dependent Histidine Labelling2022

    • Author(s)
      Nakane Keita、Niwa Tatsuya、Tsushima Michihiko、Tomoshige Shusuke、Taguchi Hideki、Nakamura Hiroyuki、Ishikawa Minoru、Sato Shinichi
    • Journal Title

      ChemCatChem

      Volume: - Issue: 9

    • DOI

      10.1002/cctc.202200077

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Shotgun Proteomics Revealed Preferential Degradation of Misfolded In Vivo Obligate GroE Substrates by Lon Protease in Escherichia coli2022

    • Author(s)
      Niwa Tatsuya、Chadani Yuhei、Taguchi Hideki
    • Journal Title

      Molecules

      Volume: 27 Issue: 12 Pages: 3772-3772

    • DOI

      10.3390/molecules27123772

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Application of fluorescence correlation spectroscopy to investigate the dynamics of a ribosome-associated trigger factor in Escherichia coli2022

    • Author(s)
      Niwa Tatsuya、Nakazawa Koki、Hoshi Kensuke、Tadakuma Hisashi、Ito Koichi、Taguchi Hideki
    • Journal Title

      Frontiers in Molecular Biosciences

      Volume: 9 Pages: 891128-891128

    • DOI

      10.3389/fmolb.2022.891128

    • Related Report
      2022 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nascent polypeptide within the exit tunnel stabilizes the ribosome to counteract risky translation2021

    • Author(s)
      Chadani Yuhei、Sugata Nobuyuki、Niwa Tatsuya、Ito Yosuke、Iwasaki Shintaro、Taguchi Hideki
    • Journal Title

      The EMBO Journal

      Volume: 40 Issue: 23 Pages: 1-13

    • DOI

      10.15252/embj.2021108299

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] C9orf72-derived arginine-rich poly-dipeptides impede phase modifiers2021

    • Author(s)
      Nanaura Hitoki、Aiba Yuichiro、Nakanishi Mari、Shiota Tomo、Hibino Masaki、Kikuchi Sotaro、Nagata Riko、Morikawa Naritaka、Iguchi Naohiko、Kiriyama Takao、Nagamori Shushi、Sugie Kazuma、Saio Tomohide、Yoshizawa Takuya、Mori Eiichiro et al.
    • Journal Title

      Nature Communications

      Volume: 12 Issue: 1 Pages: 5301-5301

    • DOI

      10.1038/s41467-021-25560-0

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] The evolutionary conserved iron-sulfur protein TCR controls P700 oxidation in photosystem I2021

    • Author(s)
      Luu Trinh Mai Duy、Miyazaki Daichi、Ono Sumire、Nomata Jiro、Kono Masaru、Mino Hiroyuki、Niwa Tatsuya、Okegawa Yuki、Motohashi Ken、Taguchi Hideki、Hisabori Toru、Masuda Shinji
    • Journal Title

      iScience

      Volume: 24 Issue: 2 Pages: 102059-102059

    • DOI

      10.1016/j.isci.2021.102059

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Novel self-regulation strategy of a small heat shock protein for prodigious and rapid expression on demand2021

    • Author(s)
      Miwa Tsukumi、Taguchi Hideki
    • Journal Title

      Current Genetics

      Volume: 67 Issue: 5 Pages: 723-727

    • DOI

      10.1007/s00294-021-01185-0

    • Related Report
      2021 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Proximity Histidine Labeling by Umpolung Strategy Using Singlet Oxygen2021

    • Author(s)
      Nakane Keita、Sato Shinichi、Niwa Tatsuya、Tsushima Michihiko、Tomoshige Shusuke、Taguchi Hideki、Ishikawa Minoru、Nakamura Hiroyuki
    • Journal Title

      Journal of the American Chemical Society

      Volume: 143 Issue: 20 Pages: 7726-7731

    • DOI

      10.1021/jacs.1c01626

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Acetate overflow metabolism regulates a major metabolic shift after glucose depletion in <i>Escherichia</i> ? <i>coli</i>2021

    • Author(s)
      Shimada Tomohiro、Nakazawa Kohta、Tachikawa Tomoyuki、Saito Natsumi、Niwa Tatsuya、Taguchi Hideki、Tanaka Kan
    • Journal Title

      FEBS Letters

      Volume: 595 Issue: 15 Pages: 2047-2056

    • DOI

      10.1002/1873-3468.14151

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Thioredoxin pathway in Anabaena sp. PCC 7120: activity of NADPH-thioredoxin reductase C2021

    • Author(s)
      Deschoenmaeker Frederic、Mihara Shoko、Niwa Tatsuya、Taguchi Hideki、Wakabayashi Ken-Ichi、Toyoshima Masakazu、Shimizu Hiroshi、Hisabori Toru
    • Journal Title

      The Journal of Biochemistry

      Volume: - Issue: 6 Pages: 709-719

    • DOI

      10.1093/jb/mvab014

    • NAID

      40022687787

    • Related Report
      2021 Annual Research Report 2020 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] G-quadruple-proximity protein labeling based on peroxidase activity.2020

    • Author(s)
      Masuzawa, T., Sato, S., Niwa, T., Tagushi, H., Nakamura, H., Oyoshi, T.
    • Journal Title

      Chem. Comm.

      Volume: 56 Issue: 78 Pages: 11641-11644

    • DOI

      10.1039/d0cc02571b

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Escherichia coli small heat shock protein IbpA is an aggregation‐sensor that self‐regulates its own expression at posttranscriptional levels2020

    • Author(s)
      Miwa Tsukumi、Chadani Yuhei、Taguchi Hideki
    • Journal Title

      Molecular Microbiology

      Volume: 115 Issue: 1 Pages: 142-156

    • DOI

      10.1111/mmi.14606

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Nascent SecM chain interacts with outer ribosomal surface to stabilize translation arrest2020

    • Author(s)
      Mikihisa Muta, Ryo Iizuka, Tatsuya Niwa, Yuanfang Guo, Hideki Taguchi, Takashi Funatsu
    • Journal Title

      Biochemical Journal

      Volume: 477 Issue: 2 Pages: 557-566

    • DOI

      10.1042/bcj20190723

    • Related Report
      2020 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] 細胞内フォールディングセンサーを用いた凝集性タンパク質の可溶化スクリーニング2024

    • Author(s)
      金澤篤宏、野島達也、三輪つくみ、田口英樹
    • Organizer
      第24回日本蛋白質科学会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 大腸菌新規遺伝子の新生ポリペプチド鎖による翻訳アレストの解析」2024

    • Author(s)
      幸保明直、田口英樹
    • Organizer
      第20回大腸菌研究会
    • Related Report
      2024 Annual Research Report
  • [Presentation] Seesaw protein: Design of a protein that adopts interconvertible alternative functional conformations.」2024

    • Author(s)
      池田刀麻、野島達也、田口英樹
    • Organizer
      第21回国際生物物理学会
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Risk during translation of acidic-rich amino acid sequences and the impact on proteomes2024

    • Author(s)
      田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Modulation of Liquid-Liquid Phase Separation and Amyloidogenesis of Sup35 by Q/N-rich Proteins.2024

    • Author(s)
      大橋祐美子、田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Distinct roles of translation factors eIF1A and eIF5B in regulating initiation step of Repeat Associated Non-AUG (RAN) translation2024

    • Author(s)
      伊藤隼人、田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Mechanism of newly identified ribosome arrest peptide, PepNL, which regulates downstream gene expression in Escherichia coli2024

    • Author(s)
      幸保明直、田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of Ribosome profiling in cell-free translation system2024

    • Author(s)
      栗原実玖、田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Identification of unexplored small proteins in Escherichia coli2024

    • Author(s)
      Shin Jihye、丹羽達也、田口英樹
    • Organizer
      日本プロテオーム学会
    • Related Report
      2024 Annual Research Report
  • [Presentation] Identification of unexplored small proteins in Escherichia coli2024

    • Author(s)
      Shin Jihye、田口英樹
    • Organizer
      International Symposium on Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 大腸菌における新規翻訳アレスト配列の解除機構と下流遺伝子発現制2024

    • Author(s)
      幸保明直、田口英樹、茶谷悠平、安藤佑真、伊藤弓弦、濡木理
    • Organizer
      第47回 日本分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 大腸菌における翻訳開始因子(IF2)の細胞内機能の解明2024

    • Author(s)
      石郷岡美咲、丹羽達也、茶谷悠平、田口英樹
    • Organizer
      第47回 日本分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 液-液相分離デザインタンパク質の創製と配列依存的特性の解析2024

    • Author(s)
      高畠晴、大橋祐美子、田口英樹
    • Organizer
      第47回 日本分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] Impact of synonymous mutations on cotranslational folding using a human PURE system.2024

    • Author(s)
      田口英樹
    • Organizer
      The 2nd Workshop on Codon Usage -Function, mechanism and evolution(2024/5/24-27)
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Promoting the efficient cotranslational folding of large multidomain proteins in the ER of mammalian cells:哺乳動物小胞体内腔におけるマルチドメインタンパク質新生鎖の効率よい折り畳みを促進する仕組み2024

    • Author(s)
      門倉 広、田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Visualization of multiple translation frames in Repeat Associated Non-AUG (RAN) translation involved in neurodegenerative diseases at single mRNA level in living cells2024

    • Author(s)
      伊藤隼人、田口英樹
    • Organizer
      CSHL ’Single Biomolecules’
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Risk during translation of acidic-rich amino acid sequences and the impact on proteomes」2024

    • Author(s)
      田口英樹
    • Organizer
      第47回日本分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] Distinct roles oftranslation factors eIF1A and eIF5B in regulating initiation step of Repeat Associated Non-AUG (RAN) translation2024

    • Author(s)
      伊藤隼人、町田幸大、永井義隆、今高寛晃、田口英樹
    • Organizer
      第47回日本分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] SCA36に関わるNOP56 GGCCUG RAN翻訳の分子機構解析2024

    • Author(s)
      蓮見眞由香、伊藤隼人、町田幸大、丹羽達也、田港朝也、永井義隆、今高寛晃、田口英樹
    • Organizer
      第47回日本分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 脊髄小脳変性症8型の関連遺伝子ATXN8OSのCUGリピート配列における非典型的翻訳の分子機構解析2024

    • Author(s)
      坂本素代香、伊藤隼人、蓮見眞由香、平野牧人、永井義隆、田口英樹
    • Organizer
      第47回日本分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 大腸菌PUREシステムで発生するRepeat Associated Non-AUG(RAN)翻訳の分子機構解析2024

    • Author(s)
      伊藤隼人、金森崇、坂本素代香、蓮見眞由香、丹羽達也、田口英樹
    • Organizer
      第19回無細胞生命科学研究会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 次世代のタンパク質フォールディング研究(シンポジウムオーガナイザー)2024

    • Author(s)
      田口英樹
    • Organizer
      第97回日本生化学会大会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 細胞内液滴に共存するタンパク質のSup35アミロイド形成への影響2024

    • Author(s)
      大橋祐美子、田口英樹
    • Organizer
      第24回日本蛋白質科学会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 低分子量熱ショックタンパク質による凝集感知を介した翻訳制御機構と熱ストレス応答制御2024

    • Author(s)
      三輪つくみ、田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Escherichia coli small heat shock protein IbpA contributes to regulate heat shock response via translational control of heat-shock sigma factor, sigma322024

    • Author(s)
      三輪つくみ、田口英樹
    • Organizer
      International Symposiumon Multifaceted Protein Dynamics
    • Related Report
      2024 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 低分子量熱ショックタンパク質による凝集感知を介した翻訳制御機構と熱ストレス応答制御2024

    • Author(s)
      三輪つくみ、田口英樹
    • Organizer
      第24回 日本蛋白質科学会
    • Related Report
      2024 Annual Research Report
  • [Presentation] 低分子量熱ショックタンパク質による翻訳制御を介した新規熱ストレス応答制御2024

    • Author(s)
      三輪つくみ、田口英樹
    • Organizer
      第47回分子生物学会年会
    • Related Report
      2024 Annual Research Report
  • [Presentation] プロテオスタシス分野における「プロテオーム」スタシス研究の役割2024

    • Author(s)
      田口英樹
    • Organizer
      日本プロテオーム学会
    • Related Report
      2024 Annual Research Report
    • Invited
  • [Presentation] A novel method for large scale analysis of polypeptidyltRNAs nascent chains with tRNAs still bound, to capture snapshots of translation in the cell2023

    • Author(s)
      田口英樹
    • Organizer
      EMBO Workshop ”Protein quality control: From molecular mechanisms to therapeutic intervention”@クロアチア
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 『大腸菌を用いた翻訳の品質管理機構による遺伝子発現制御機構の解明』2023

    • Author(s)
      栗原 実玖、茶谷悠平、田口英樹
    • Organizer
      第19回大腸菌研究会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 『Reconstitution of C9orf72 (GGGGCC) repeat-associated nonAUG translation with purified components 』2023

    • Author(s)
      伊藤隼人、町田幸大、上山盛夫、永井義隆、今高寛晃、田口英樹
    • Organizer
      第24回日本RNA学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 『A novel pathway by which translation quality control mechanisms regulate gene expression in Escherichia coli』2023

    • Author(s)
      栗原実玖、茶谷悠平、田口英樹
    • Organizer
      第24回日本RNA学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 『 Identification of a novel translation arrest sequence in Escherichia coli and its molecular mechanism 』2023

    • Author(s)
      幸保明直、茶谷悠平、田口英樹
    • Organizer
      第24回日本RNA学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 『The molecular mechanism of NOP56 GGCCUG Repeat Associated Non-AUG(RAN) translation』2023

    • Author(s)
      蓮見眞由香、伊藤隼人、町田幸大、丹羽達也、田港朝也、永井義隆、今高寛晃、田口英樹
    • Organizer
      第24回日本RNA学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 「 Identification of a novel translation arrest sequence in Escherichia coli and its molecular mechanism 」2023

    • Author(s)
      幸保明直、田口英樹、茶谷悠平、安藤佑真、伊藤弓弦、濡木理
    • Organizer
      第46回日本分子生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 「大腸菌における新規翻訳アレスト配列の同定とその分子メカニズム」2023

    • Author(s)
      幸保明直、田口英樹、茶谷悠平、安藤佑真、伊藤弓弦、濡木理
    • Organizer
      第46回日本分子生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 「c9orf72 GGGGCCリピートで発生するRepeat Associated Non-AUG (RAN)翻訳のヒト翻訳因子による再構成型翻訳系を用いた分子機構解析」2023

    • Author(s)
      伊藤隼人、町田幸大、上山盛夫、永井義隆、今高寛晃、田口英樹
    • Organizer
      第46回日本分子生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 「酵母プリオンSup35タンパク質の液-液相分離による液滴形成機構」2023

    • Author(s)
      餘目果依、大橋祐美子、田口英樹
    • Organizer
      第46回日本分子生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] 「IbpA, an Escherichia coli small Hsp, is an aggregation-sensor that regulates its own translation and heat shock response at a translational level.」2023

    • Author(s)
      三輪つくみ、田口英樹
    • Organizer
      EMBO Workshop ”Protein quality control: From molecular mechanisms to therapeutic intervention”@クロアチア
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 大腸菌低分子量熱ショックタンパク質IbpAによる翻訳レベルでの熱ストレス応答制御2023

    • Author(s)
      三輪つくみ、田口英樹
    • Organizer
      第46回日本分子生物学会年会
    • Related Report
      2023 Annual Research Report
  • [Presentation] IbpA, an Escherichia coli small Hsp, is an aggregation-sensor that regulates its own translation and heat shock response at a translational level.2023

    • Author(s)
      Cheng Yajie、田口英樹
    • Organizer
      EMBO Workshop ”Protein quality control: From molecular mechanisms to therapeutic intervention”@クロアチア(230521~230526)
    • Related Report
      2023 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 翻訳停滞とリボソーム不安定化による非典型的翻訳の駆動と再構成2022

    • Author(s)
      茶谷悠平、田口英樹
    • Organizer
      第22回 日本蛋白質科学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] ”Elucidation of the Mechanism by Which sHSP lbpA Regulates Its Own Expression at the Transltional Level”2022

    • Author(s)
      Yajie, Cheng, 田口英樹
    • Organizer
      第22回 日本蛋白質科学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] 遺伝情報を拡張、再定義する非典型的翻訳の再構成2022

    • Author(s)
      茶谷悠平、田口英樹
    • Organizer
      第18回大腸菌研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] Nascent peptide-induced translation discontinuation in eukaryotes impacts biased amino acid usage in proteomes2022

    • Author(s)
      茶谷悠平、田口英樹
    • Organizer
      第23回日本RNA学会年会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 負電荷アミノ酸クラスターの翻訳による確率的途上終結の分子メカニズム2022

    • Author(s)
      茶谷悠平、田口英樹
    • Organizer
      第17回無細胞生命科学研究会
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 大腸菌低分子量熱ショックタンパク質IbpAによる凝集2022

    • Author(s)
      三輪つくみ、田口英樹
    • Organizer
      第45回日本分子生物学会年会
    • Related Report
      2022 Annual Research Report
  • [Presentation] Nascent polypeptide within the tunnel stabilizes the ribosome to counteract risky translation2022

    • Author(s)
      Yuhei Chadani
    • Organizer
      Protein Folding on the Ribosome 2022
    • Related Report
      2022 Annual Research Report
    • Invited
  • [Presentation] 非典型的な翻訳動態によって拡大しうるタンパク質の世界2021

    • Author(s)
      田口英樹
    • Organizer
      第15回日本臨床ストレス応答学会シンポジウム
    • Related Report
      2021 Annual Research Report
    • Invited

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Published: 2020-11-24   Modified: 2026-01-16  

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