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Controls of dendritic arbor geometry and processing of inputs

Planned Research

Project AreaMesoscopic neurocircuitry: towards understanding of the functional and structural basis of brain information processing
Project/Area Number 22115006
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKyoto University

Principal Investigator

UEMURA Tadashi  京都大学, 生命科学研究科, 教授 (80213396)

Co-Investigator(Renkei-kenkyūsha) USUI Tadao  京都大学, 大学院生命科学研究科, 助教 (10324708)
Project Period (FY) 2010-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥121,160,000 (Direct Cost: ¥93,200,000、Indirect Cost: ¥27,960,000)
Fiscal Year 2014: ¥19,370,000 (Direct Cost: ¥14,900,000、Indirect Cost: ¥4,470,000)
Fiscal Year 2013: ¥21,320,000 (Direct Cost: ¥16,400,000、Indirect Cost: ¥4,920,000)
Fiscal Year 2012: ¥20,280,000 (Direct Cost: ¥15,600,000、Indirect Cost: ¥4,680,000)
Fiscal Year 2011: ¥21,060,000 (Direct Cost: ¥16,200,000、Indirect Cost: ¥4,860,000)
Fiscal Year 2010: ¥39,130,000 (Direct Cost: ¥30,100,000、Indirect Cost: ¥9,030,000)
Keywords樹状突起 / 神経回路 / 感覚神経 / ショウジョウバエ / 演算 / カルシウムイメージング
Outline of Final Research Achievements

Neurons receive sensory or synaptic inputs that strike on their dendritic arbors. We employed Drosophila Class IV dendritic arborization neuron (Class IV neuron) to study from and function of the arbors. Self-avoidance of dendritic branches is one of remarkable morphological features of dendritic arbors, and we showed that this self-avoidance requires a novel complex of the seven-pass transmembrane cadherin Flamingo (Fmi) and a LIM domain protein Espinas (Esn). We also performed genome-wide analyses and unraveled genetic programs that produce neuronal subtype-selective morphological traits, such as directional control of dendritic branch extension and overall arbor size. Furthermore, we examined responses of Class IV neurons to sensory inputs at molecular, cellular, and behavior levels, and proposed underlying mechanisms by which
Class IV neurons function as somatosensory polymodal nociceptors responsible for noxious thermal, mechanical, and light sensation.

Report

(6 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • 2011 Annual Research Report
  • 2010 Annual Research Report
  • Research Products

    (54 results)

All 2015 2014 2013 2012 2011 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Open Access: 4 results,  Acknowledgement Compliant: 4 results) Presentation (43 results) (of which Invited: 7 results) Remarks (5 results)

  • [Journal Article] Age-dependent deterioration of locomotion in Drosophila melanogaster deficient in the homolog of Amyotrophic Lateral Sclerosis 2.2014

    • Author(s)
      Yuta Takayama, Reina E. Itoh, Taiichi Tsuyama, and Tadashi Uemura.
    • Journal Title

      Genes to Cells

      Volume: 19(6) Issue: 6 Pages: 464-477

    • DOI

      10.1111/gtc.12146

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] An evolutionarily conserved protein CHORD regulates scaling of dendritic arbors with body size.2014

    • Author(s)
      Kohei Shimono, Kazuto Fujishima, Takafumi Nomura, Masayoshi Ohashi, Tadao Usui, Mineko Kengaku, Atsushi Toyoda, and Tadashi Uemura.
    • Journal Title

      Scientific Reports

      Volume: 4 Issue: 1 Pages: 4415-4415

    • DOI

      10.1038/srep04415

    • NAID

      120005399036

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] In vivo fluorescent ATP imaging of Drosophila melanogaster and Caenorhabditis elegans by using a genetically encoded fluorescent ATP biosensor optimized for low temperatures.2013

    • Author(s)
      Tsuyama, Taiichi; Kishikawa, Jun-ichi; Han, Yong-Woon; Harada, Yoshie; Tsubouchi, Asako; Noji, Hiroyuki; Kakizuka, Akira; Yokoyama, Ken; Uemura, Tadashi; Imamura, Hiromi.
    • Journal Title

      Analytical Chemistry

      Volume: 85(16) Issue: 16 Pages: 7889-7896

    • DOI

      10.1021/ac4015325

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Sensory-neuron subtype-specific transcriptional programs controlling dendrite morphogenesis: genome-wide analysis of Abrupt and Knot/Collier.2013

    • Author(s)
      Yukako Hattori, Tadao Usui, Daisuke Satoh, Sanefumi Moriyama, Kohei Shimono, Takehiko Itoh, Katsuhiko Shirahige, Tadashi Uemura.
    • Journal Title

      Developmental Cell

      Volume: 27(5) Issue: 5 Pages: 530-544

    • DOI

      10.1016/j.devcel.2013.10.024

    • NAID

      120005348995

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] High-resolution in vivo imaging of regenerating dendrites of Drosophila sensory neurons during metamorphosis: local filopodial degeneration and heterotypic dendrite-dendrite contacts2012

    • Author(s)
      Daisuke Satoh*, Ritsuko Suyama*, Ken-ichi Kimura, Tadashi Uemura (*: equal contribution).
    • Journal Title

      Genes to Cells

      Volume: 12 Issue: 12 Pages: 939-951

    • DOI

      10.1111/gtc.12008

    • Related Report
      2012 Annual Research Report 2011 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Seven-pass transmembrane Cadherin Flamingo Controls Dendritic Self-avoidance via its Binding to a LIM Domain Protein Espinas in Drosophila Sensory Neurons2011

    • Author(s)
      Daisuke Matsubara, Shin-ya Horiuchi, Kohei Shimono, Tadao Usui, Tadashi Uemura
    • Journal Title

      Genes & Development

      Volume: 25 Pages: 1981-1996

    • Related Report
      2010 Annual Research Report
    • Peer Reviewed
  • [Presentation] Interorgan communication controlling size of neuronal dendritic arbors in response to nutritional restriction.2015

    • Author(s)
      上村 匡
    • Organizer
      The CDB Symposium 2015 "Time in Development"
    • Place of Presentation
      神戸
    • Year and Date
      2015-03-23
    • Related Report
      2014 Annual Research Report
  • [Presentation] Nociceptor neurons control escape behaviors by regulating specific firing patterns through Ca2+ spikes.2015

    • Author(s)
      小野寺 孝興
    • Organizer
      生命動態科学拠点シンポジウム
    • Place of Presentation
      京都
    • Year and Date
      2015-03-16
    • Related Report
      2014 Annual Research Report
  • [Presentation] Nociceptor neurons control escape behaviors by regulating specific firing patterns through Ca2+ spikes.2015

    • Author(s)
      小野寺 孝興
    • Organizer
      第13回国際学生セミナー(International Student Seminar)
    • Place of Presentation
      京都
    • Year and Date
      2015-03-03
    • Related Report
      2014 Annual Research Report
  • [Presentation] 高温感覚器への赤外線レーザー刺激とCaイメージングの同時実施2015

    • Author(s)
      碓井 理夫
    • Organizer
      第9回NIBBバイオイメージングフォーラム
    • Place of Presentation
      岡崎
    • Year and Date
      2015-01-26
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Making a sensory system: a transcriptional program, scaling growth, and polymodality.2014

    • Author(s)
      上村 匡
    • Organizer
      ICOB Seminar
    • Place of Presentation
      Taipei
    • Year and Date
      2014-12-22
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 神経細胞樹状突起のスケーリング成長2014

    • Author(s)
      上村 匡
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] 痛覚受容ニューロンはCa2+スパイクを介した特異的発火パターンの生成により逃避行動を制御する2014

    • Author(s)
      小野寺 孝興
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Year and Date
      2014-11-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] 痛覚受容ニューロンはCa2+スパイクを介した特異的発火パターンの生成により逃避行動を制御する2014

    • Author(s)
      小野寺 孝興
    • Organizer
      メゾ神経回路第1回領域会議
    • Place of Presentation
      熱海
    • Year and Date
      2014-09-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] Single-cell multimodal encoding of noxious thermal and light sensation in Drosophila primary sensory neurons.2014

    • Author(s)
      碓井 理夫
    • Organizer
      第37回日本神経科学大会
    • Place of Presentation
      横浜
    • Year and Date
      2014-09-12
    • Related Report
      2014 Annual Research Report
  • [Presentation] Single-cell multimodal encoding of noxious thermal and light sensation in Drosophila primary somatosensory neurons.2014

    • Author(s)
      碓井 理夫
    • Organizer
      第11回日本ショウジョウバエ研究会(JDRC11)
    • Place of Presentation
      金沢
    • Year and Date
      2014-06-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] Neuronal subtype-specific regulation of directional dendrite growth through a cell adhesion molecule Ten-m.2014

    • Author(s)
      服部 佑佳子
    • Organizer
      第11回日本ショウジョウバエ研究会(JDRC11)
    • Place of Presentation
      金沢
    • Year and Date
      2014-06-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] An evolutionarily conserved protein CHORD regulates scaling of dendritic arbors with body size.2014

    • Author(s)
      上村 匡
    • Organizer
      Behavioral Neurogenetics of larval Drosophila: Molecules, Circuits, Computation & Robotics
    • Place of Presentation
      熱海
    • Year and Date
      2014-03-11
    • Related Report
      2013 Annual Research Report
  • [Presentation] Nociceptor neurons control escape behavior patterns by regulating Ca2+ spike generation.2014

    • Author(s)
      小野寺 孝興
    • Organizer
      Behavioral Neurogenetics of larval Drosophila: Molecules, Circuits, Computation & Robotics
    • Place of Presentation
      熱海
    • Year and Date
      2014-03-10
    • Related Report
      2013 Annual Research Report
  • [Presentation] Single-cell multimodal encoding of noxious thermal and light sensation in Drosophila primary sensory neurons.2014

    • Author(s)
      碓井 理夫
    • Organizer
      Behavioral Neurogenetics of larval Drosophila: Molecules, Circuits, Computation & Robotics
    • Place of Presentation
      熱海
    • Year and Date
      2014-03-09 – 2014-03-12
    • Related Report
      2013 Annual Research Report
  • [Presentation] An evolutionarily conserved protein CHORD regulates scaling of dendritic arbors with body size.2014

    • Author(s)
      下野 耕平
    • Organizer
      第12回国際学生セミナー(International Student Seminar)
    • Place of Presentation
      京都
    • Year and Date
      2014-02-18
    • Related Report
      2013 Annual Research Report
  • [Presentation] Nociceptor neurons control escape behavior patterns by regulating Ca2+ spike generation.2014

    • Author(s)
      小野寺 孝興
    • Organizer
      第12回国際学生セミナー(International Student Seminar)
    • Place of Presentation
      京都
    • Year and Date
      2014-02-17
    • Related Report
      2013 Annual Research Report
  • [Presentation] Neuronal subtype-specific regulation of directional dendrite growth through a cell adhesion molecule Ten-m.2014

    • Author(s)
      服部 佑佳子
    • Organizer
      第12回国際学生セミナー(International Student Seminar)
    • Place of Presentation
      京都
    • Year and Date
      2014-02-17
    • Related Report
      2013 Annual Research Report
  • [Presentation] Mechanistic analysis of neuronal subtype-specific dendritic regression due to mitochondrial dysfunction using in vivo ATP imaging.2014

    • Author(s)
      津山 泰一
    • Organizer
      第3回発生過程におけるエネルギー代謝を考える会
    • Place of Presentation
      熊本
    • Year and Date
      2014-02-14
    • Related Report
      2013 Annual Research Report
  • [Presentation] 樹状突起の異常交差に起因する“てんかん様症状 ”の発症機構の追及2014

    • Author(s)
      碓井 理夫
    • Organizer
      脳内環境 平成25年度冬の班会議
    • Place of Presentation
      東京
    • Year and Date
      2014-01-08
    • Related Report
      2013 Annual Research Report
  • [Presentation] Linking body size to morphology of neuronal dendritic arbors in adults.2013

    • Author(s)
      上村 匡
    • Organizer
      ASCB Annual Meeting
    • Place of Presentation
      New Orleans
    • Year and Date
      2013-12-15
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Molecular mechanisms controlling size of neuronal dendritic arbors.2013

    • Author(s)
      下野 耕平
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Year and Date
      2013-12-05
    • Related Report
      2013 Annual Research Report
  • [Presentation] Single-cell multimodal encoding of noxious thermal and light sensation in Drosophila primary sensory neurons.2013

    • Author(s)
      碓井 理夫
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Year and Date
      2013-12-04
    • Related Report
      2013 Annual Research Report
  • [Presentation] Nociceptor neurons control escape behavior patterns by regulating Ca2+ spike generation.2013

    • Author(s)
      小野寺 孝興
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Year and Date
      2013-12-03
    • Related Report
      2013 Annual Research Report
  • [Presentation] ゲノミクスをどう使うか:神経細胞のサブタイプ間の違いを生み出すプログラムの解明と、今後2013

    • Author(s)
      服部 佑佳子
    • Organizer
      日本発生生物学会 2013年秋季シンポジウム
    • Place of Presentation
      神戸
    • Year and Date
      2013-11-18
    • Related Report
      2013 Annual Research Report
  • [Presentation] 痛覚受容ニューロンはCa2+トランジェント の発生を調節して逃避行動パターンを制御する2013

    • Author(s)
      小野寺 孝興
    • Organizer
      新学術領域研究 「メゾスコピック神経回路から探る脳の情報処理基盤」平成25年度第1回領域班会議
    • Place of Presentation
      熱海
    • Year and Date
      2013-09-21
    • Related Report
      2013 Annual Research Report
  • [Presentation] 遺伝学的摂動を用いた樹状突起ジオメトリーの演算原理の追究2013

    • Author(s)
      碓井 理夫
    • Organizer
      新学術領域研究 「メゾスコピック神経回路から探る脳の情報処理基盤」平成25年度第1回領域班会議
    • Place of Presentation
      熱海
    • Year and Date
      2013-09-21
    • Related Report
      2013 Annual Research Report
  • [Presentation] Scaling Dendritic Arbors of Adult Neurons.2013

    • Author(s)
      上村 匡
    • Organizer
      2nd Asia-Pacific Drosophila Research Conference(APDRC2)
    • Place of Presentation
      Seoul
    • Year and Date
      2013-05-13
    • Related Report
      2013 Annual Research Report
  • [Presentation] Dendritic processing of noxious thermal stimuli in Drosophila sensory neurons.2013

    • Author(s)
      碓井 理夫
    • Organizer
      2nd Asia-Pacific Drosophila Research Conference(APDRC2)
    • Place of Presentation
      Seoul
    • Year and Date
      2013-05-13
    • Related Report
      2013 Annual Research Report
  • [Presentation] Dendritic arborization: life-long maintenance and allometry.2013

    • Author(s)
      下野 耕平
    • Organizer
      第11回 京都大学・国立台湾大学合同「分子細胞生物学シンポジウム」
    • Place of Presentation
      京都
    • Year and Date
      2013-05-03
    • Related Report
      2013 Annual Research Report
  • [Presentation] The Seven-pass transmembrane Cadherin Flamingo Controls Dendritic Self-avoidance via its Binding to a LIM Domain Protein Espinas in Drosophila Sensory Neurons2011

    • Author(s)
      Daisuke Matsubara, Shin-ya Horiuchi, Kohei Shimono, Tadashi Uemura, Tadao Usui
    • Organizer
      日本分子生物学会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2011-12-13
    • Related Report
      2010 Annual Research Report
  • [Presentation] The Seven-pass transmembrane Cadherin Flamingo Controls Dendritic Self-avoidance via its Binding to a LIM Domain Protein Espinas in Drosophila Sensory Neurons2011

    • Author(s)
      Daisuke Matsubara
    • Organizer
      1st Asia-Pacific Drosophila Research Conference
    • Place of Presentation
      台湾
    • Related Report
      2011 Annual Research Report
  • [Presentation] Genome-wide view of transcriptional programs governing neuronal subtype-specific dendrite morphogenesis in vivo

    • Author(s)
      Yukako Hattori
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大 会
    • Place of Presentation
      神戸
    • Related Report
      2012 Annual Research Report
  • [Presentation] The Seven-pass transmembrane Cadherin Flamingo Controls Dendritic Self-avoidance via its Binding to a LIM Domain Protein Espinas in Drosophila Sensory Neurons

    • Author(s)
      Daisuke Matsubara
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大 会
    • Place of Presentation
      神戸
    • Related Report
      2012 Annual Research Report
  • [Presentation] 遺伝子ネットワークから細胞ジオメトリーを解く

    • Author(s)
      Tadashi Uemura
    • Organizer
      平成24年度文部科学省数学・数理科学と諸科学・産業との連携 研究ワークショップ
    • Place of Presentation
      博多
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Dissecting postmitotic transcriptional programs governing subtype-specific cell morphogenesis of Drosophila sensory neurons

    • Author(s)
      Yukako Hattori
    • Organizer
      EMBO Conference Series From Functional Genomics to Systems Biology Society for Cell Biology
    • Place of Presentation
      Germany
    • Related Report
      2012 Annual Research Report 2011 Annual Research Report
  • [Presentation] Dissecting postmitotic transcriptional programs governing subtype-specific dendrite morphogenesis of Drosophila sensory neurons

    • Author(s)
      Yukako Hattori
    • Organizer
      第35回日本分子生物学会年会
    • Place of Presentation
      博多
    • Related Report
      2012 Annual Research Report 2011 Annual Research Report
    • Invited
  • [Presentation] Postmitotic transcriptional programs controlled by subtype selectors of Drosophila sensory neurons: genome-wide analysis of Abrupt and Knot/Collier in vivo

    • Author(s)
      Yukako Hattori
    • Organizer
      The 11th International Student Seminar,Kyoto University
    • Place of Presentation
      京都
    • Related Report
      2012 Annual Research Report 2011 Annual Research Report
  • [Presentation] Dual Genome-wide Hunting for Target Genes of Transcription Factors that Control Neuronal Class-specific Dendrite Morphogenesis

    • Author(s)
      Yukako Hattori
    • Organizer
      1st Asia-Pacific Drosophila Research Conference
    • Place of Presentation
      台湾
    • Related Report
      2011 Annual Research Report
  • [Presentation] The Seven-pass transmembrane Cadherin Flamingo Controls Dendritic Self-avoidance via its Binding to a LIM Domain Protein Espinas in Drosophila Sensory Neurons

    • Author(s)
      Daisuke Matsubara
    • Organizer
      第34回日本分子生物学会
    • Place of Presentation
      横浜
    • Related Report
      2011 Annual Research Report
  • [Presentation] The seven-pass transmembrane cadherin Flamingo: multiple missions in vivo

    • Author(s)
      Tadashi Uemura
    • Organizer
      第34回日本分子生物学会年会
    • Place of Presentation
      横浜
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Presentation] Genome-wide view of transcriptional programs governing neuronal subtype-specific dendrite morphogenesis in vivo

    • Author(s)
      Yukako Hattori
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      神戸
    • Related Report
      2011 Annual Research Report
  • [Presentation] The Seven-pass transmembrane Cadherin Flamingo Controls Dendritic Self-avoidance via its Binding to a LIM Domain Protein Espinas in Drosophila Sensory Neurons

    • Author(s)
      Daisuke Matsubara
    • Organizer
      第45回日本発生生物学会・第64回日本細胞生物学会合同大会
    • Place of Presentation
      神戸
    • Related Report
      2011 Annual Research Report
  • [Presentation] 遺伝子ネットワークから細胞ジオメトリーを解く

    • Author(s)
      Tadashi Uemura
    • Organizer
      平成24年度文部科学省数学・数理科学と諸科学・産業との連携研究ワークショップ
    • Place of Presentation
      博多
    • Related Report
      2011 Annual Research Report
    • Invited
  • [Remarks] 日本の発生学を知る写真シリーズ|上村研究室(1)

    • URL

      http://www.jsdb.jp/leaders/post-19.html#000277

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
  • [Remarks] 日本の発生学を知る写真シリーズ|上村研究室(2)

    • URL

      http://www.jsdb.jp/leaders/post-20.html#000278

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
  • [Remarks] 研究内容まとめ1

    • URL

      http://www.cellpattern.lif.kyoto-u.ac.jp/research/long1/index.html

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
  • [Remarks] 京都大学大学院 生命科学研究科 細胞認識学 研究概要

    • URL

      http://www.lif.kyoto-u.ac.jp/j/?post_type=labos&p=148

    • Related Report
      2014 Annual Research Report
  • [Remarks] 京都大学大学院 生命科学研究科 細胞認識学分野 研究概要

    • URL

      http://www.lif.kyoto-u.ac.jp/j/?post_type=labos&p=148

    • Related Report
      2013 Annual Research Report

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Published: 2010-08-23   Modified: 2019-07-29  

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