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Design and Implementation of Chemical Reaction Circuits for Molecular Robots with Intelligence

Planned Research

Project AreaDevelopment of Molecular Robots equipped with sensors and intelligence
Project/Area Number 24104003
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Science and Engineering
Research InstitutionThe University of Electro-Communications

Principal Investigator

Kobayashi Satoshi  電気通信大学, 大学院情報理工学研究科, 教授 (50251707)

Co-Investigator(Kenkyū-buntansha) 山下 雅史  九州大学, システム情報科学研究科(研究院, 教授 (00135419)
小宮 健  東京工業大学, 総合理工学研究科(研究院), 助教 (20396790)
藤本 健造  北陸先端科学技術大学院大学, マテリアルサイエンス研究科, 教授 (90293894)
鈴木 泰博  名古屋大学, 情報科学研究科, 准教授 (50292983)
原 雄介  国立研究開発法人産業技術総合研究所, その他部局等, 研究員 (90452135)
Co-Investigator(Renkei-kenkyūsha) Yokomori Takashi  早稲田大学, 教育・総合科学学術院, 教授 (60139722)
Imura Junichi  東京工業大学, 大学院情報理工学研究科, 教授 (50252474)
Hayami Ken  国立情報学研究所, 情報学プリンシプル研究系, 教授 (20251358)
Yannick Rondelez  東京大学, 生産技術研究所, 准教授 (10548770)
Project Period (FY) 2012-06-28 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥190,320,000 (Direct Cost: ¥146,400,000、Indirect Cost: ¥43,920,000)
Fiscal Year 2016: ¥29,510,000 (Direct Cost: ¥22,700,000、Indirect Cost: ¥6,810,000)
Fiscal Year 2015: ¥36,140,000 (Direct Cost: ¥27,800,000、Indirect Cost: ¥8,340,000)
Fiscal Year 2014: ¥37,700,000 (Direct Cost: ¥29,000,000、Indirect Cost: ¥8,700,000)
Fiscal Year 2013: ¥45,760,000 (Direct Cost: ¥35,200,000、Indirect Cost: ¥10,560,000)
Fiscal Year 2012: ¥41,210,000 (Direct Cost: ¥31,700,000、Indirect Cost: ¥9,510,000)
Keywords分子ロボット / DNAコンピュータ / 自己組織化 / 知能ロボティクス / 生体生命情報学 / DNAコンピュータ / DNA論理回路 / 分子ロボティクス / DNA計算 / 光応答性塩基 / 増幅回路 / ゲルアクチュエータ
Outline of Final Research Achievements

In this research project, we presented a design methodology of chemical reaction circuits using DNA for molecular robots with intelligence, and chemically implemented a prototype of a molecular robot in collaboration with other teams in "Molecular Robotics" project. Main results include: the development of high speed computing devices equipped with light responsive artificial nucleotides, implementation of an example of chemical reaction circuit which can adopt effectively to changes of environment, and the development of a high performance 1000-fold amplifier which resolved concentration gap problem between devices in molecular robots, and greatly contributed to the implementation of a prototype of molecular robot. We also developed a design theory of "reactive" chemical reaction circuits and theory of distributed computing, both of which are adequate for molecular robots.

Report

(6 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (163 results)

All 2017 2016 2015 2014 2013 2012 Other

All Int'l Joint Research (3 results) Journal Article (60 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 59 results,  Open Access: 10 results,  Acknowledgement Compliant: 26 results) Presentation (91 results) (of which Int'l Joint Research: 13 results,  Invited: 22 results) Book (4 results) Remarks (1 results) Patent(Industrial Property Rights) (4 results)

  • [Int'l Joint Research] University of Ottawa/Carleton University(Canada)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] King's College(United Kingdom)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] Univ. Ottawa(Canada)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Plane Formation by Synchronous Mobile Robots in the Three Dimensional Euclidean Space2017

    • Author(s)
      Yukiko Yamauchi, Taichi Uehara, Shuji Kijima, and Masafumi Yamashita
    • Journal Title

      Journal of the ACM

      Volume: -

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Molecular Artificial Intelligence by using DNA reactions2017

    • Author(s)
      Yasuhiro Suzuki, Rie Taniguchi
    • Journal Title

      Proceedings of International Conference on Artificial Life and Robotics 2017

      Volume: - Pages: 591-594

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Neural Networks by using Self-Reinfocement Reactions2017

    • Author(s)
      Yasuhiro Suzuki
    • Journal Title

      Proc. of International Conference on Artificial Life and Robotics 2017

      Volume: - Pages: 595-598

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Artificial Chemistry by Sound Waves2017

    • Author(s)
      Yasuhiro Suzuki
    • Journal Title

      International Conference on Artificial Life and Robotics 2017

      Volume: - Pages: 599-602

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] RNA fluorescence in situ hybridization using 3-cyanovinylcarbazole modified oligodeoxyribonucleotides as photo-cross-linkable probes2016

    • Author(s)
      Kenzo Fujimoto, Kei Toyosato, Shigetaka Nakamura, Takashi Sakamoto
    • Journal Title

      Bioorganic & Medicinal Chemistry Letters

      Volume: 26 Issue: 21 Pages: 5312-5314

    • DOI

      10.1016/j.bmcl.2016.09.035

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Sequence-specific DNA photo-splitting of 3-cyanovinylcarbazole using DNA strand displacement2016

    • Author(s)
      Shigetaka Nakamura, Hayato Kawabata, Kenzo Fujimoto
    • Journal Title

      ChemBioChem

      Volume: 17 Issue: 16 Pages: 1499-1503

    • DOI

      10.1002/cbic.201600236

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Effect of 5-substitution of uracil base in DNA photo-cross-linking using 3-cyanovinylcarbazole2016

    • Author(s)
      Shigetaka Nakamura, Hayato Kawabata, Hodaka Muramatsu, Kenzo Fujimoto
    • Journal Title

      Chem. Lett.

      Volume: 45 Issue: 8 Pages: 887-889

    • DOI

      10.1246/cl.160382

    • NAID

      130005254533

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] UVA Responsive Anticancer Prodrugs Based on Photoinduced Electron Injection into Oligonucleotide Having 5-Halouracils2016

    • Author(s)
      Kenzo Fujimoto, Mirei Furusawa, Shigetaka Nakamura, Takashi Sakamoto
    • Journal Title

      Chem. Lett.

      Volume: 45 Issue: 9 Pages: 1078-1080

    • DOI

      10.1246/cl.160492

    • NAID

      130005549101

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Reversible Gel-Sol Transition of Photo-Responsive DNA Gel2016

    • Author(s)
      Daisuke Kandatsu, Ibuki Kawamata, Shogo Hamada, Shin-ichiro M. Nomura, Kenzo Fujimoto, Satoshi Murata
    • Journal Title

      ChemBioChem

      Volume: 17 Issue: 12 Pages: 1118-1121

    • DOI

      10.1002/cbic.201600088

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Plane Formation by Semi-synchronous Robots in the Three Dimensional Euclidean Space2016

    • Author(s)
      Taichi Uehara, Yukiko Yamauchi, Shuji Kijima, and Masafumi Yamashita
    • Journal Title

      Proceedings of the 18th International Symposium on Stabilization, Safety, and Security of Distributed Systems

      Volume: - Pages: 383-398

    • DOI

      10.1007/978-3-319-49259-9_30

    • ISBN
      9783319492582, 9783319492599
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Searching for an Evader in an Unknown Graph by an Optimal Number of Searchers2016

    • Author(s)
      Takahiro Yakami, Yukiko Yamauchi, Shuji Kijima, and Masafumi Yamashita
    • Journal Title

      Proceedings of the 18th International Symposium on Stabilization, Safety, and Security of Distributed Systems

      Volume: - Pages: 399-414

    • DOI

      10.1007/978-3-319-49259-9_31

    • ISBN
      9783319492582, 9783319492599
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Brief Announcement: Symmetricity in 3D-space---Characterizing Formable Patterns by Synchronous Mobile Robots2016

    • Author(s)
      Yukiko Yamauchi, Taichi Uehara, and Masafumi Yamashita
    • Journal Title

      Proceedings of the 30th International Symposium on Distributed Computing

      Volume: -

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Brief Announcement: Pattern Formation Problem for Synchronous Mobile Robots in the Three Dimensional Euclidean Space2016

    • Author(s)
      Yukiko Yamauchi, Taichi Uehara, and Masafumi Yamashita
    • Journal Title

      Proceedings of the 35th ACM SIGACT-SIGOPS Symposium on Principles of Distributed Computing

      Volume: - Pages: 447-449

    • DOI

      10.1145/2933057.2933063

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Universal Systems of Oblivious Mobile Robots2016

    • Author(s)
      Paola Flocchini, Nicola Santoro, Giovanni Viglietta, and Masafumi Yamashita
    • Journal Title

      Proceedings of the 23rd International Colloquium on Structural Information and Communication Complexity

      Volume: - Pages: 242-257

    • DOI

      10.1007/978-3-319-48314-6_16

    • ISBN
      9783319483139, 9783319483146
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Realization of Periodic Functions by Self-stabilizing Population Protocols with Synchronous Handshakes2016

    • Author(s)
      Anissa Lamani, and Masafumi Yamashita
    • Journal Title

      Proceedings of the 5th International Conference on the Theory and Practice of Natural Computing

      Volume: - Pages: 21-33

    • DOI

      10.1007/978-3-319-49001-4_2

    • ISBN
      9783319490007, 9783319490014
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Analysis and design of a single-molecule DNA nanodevice for thermal band-pass filters2016

    • Author(s)
      J. A. Rose, K. Komiya
    • Journal Title

      Proceedings of the 11th IEEE Annual International Conference on Nano/Micro Engineered and Molecular Systems

      Volume: - Pages: 79-84

    • DOI

      10.1109/nems.2016.7758205

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Engineering multistate DNA molecules: a tunable thermal band-pass filter2016

    • Author(s)
      J. A. Rose, K. Komiya, S. Kobayashi
    • Journal Title

      Micro & Nano Letters

      Volume: 11 Issue: 10 Pages: 595-601

    • DOI

      10.1049/mnl.2016.0345

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] DNAナノマシン2016

    • Author(s)
      小宮 健
    • Journal Title

      現代化学

      Volume: 548 Pages: 32-35

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Molecular computers for molecular robots as hybrid systems2016

    • Author(s)
      Masami Hagiya, Nathanael Aubert-Kato, Shaoyu Wang, Satoshi Kobayashi
    • Journal Title

      Theoretical Computer Science

      Volume: 未定 Pages: 4-20

    • DOI

      10.1016/j.tcs.2015.11.002

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Autonomous mobile robots with lights2015

    • Author(s)
      Shantanu Das, Paola Flocchini, Giuseppe Prencipe, Nicola Santoro, Masafumi Yamashita
    • Journal Title

      Theoretical Computer Science

      Volume: 609 Pages: 171-184

    • DOI

      10.1016/j.tcs.2015.09.018

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Photo-cross-linking using trifluorothymidine and 3-cyanovinylcarbazole induced large shifted 19F MR signal2015

    • Author(s)
      Shigetaka Nakamura, Kenzo Fujimoto
    • Journal Title

      Chemical Communications

      Volume: 51 Issue: 59 Pages: 11765-11768

    • DOI

      10.1039/c5cc02972d

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] DNA Photo-cross-linking using 3-Cyanovinylcarbazole Modified Oligonucleotide with Threoninol Linker2015

    • Author(s)
      Takashi Sakamoto; Yuya Tanaka; Kenzo Fujimoto
    • Journal Title

      Organic Letters

      Volume: 17 Issue: 4 Pages: 936-939

    • DOI

      10.1021/acs.orglett.5b00035

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Critical Effect of Base Pairing of Target Pyrimidine on the Inter-strand Photo-cross-linking of DNA via 3-Cyanovinylcarbazole Nucleoside2015

    • Author(s)
      Takashi Sakamoto, Minako Ooe, Kenzo Fujimoto
    • Journal Title

      Bioconjugate Chemistry

      Volume: 26 Issue: 8 Pages: 1475-1478

    • DOI

      10.1021/acs.bioconjchem.5b00352

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Cascading DNA Generation Reaction for Controlling DNA Nanomachines at a Physiological Temperature2015

    • Author(s)
      Ken Komiya and Masayuki Yamamura
    • Journal Title

      New Generation Computing

      Volume: 33 Issue: 3 Pages: 213-229

    • DOI

      10.1007/s00354-015-0304-5

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Pattern Formation by Oblivious Asynchronous Mobile Robots2015

    • Author(s)
      Nao Fujinaga, Yukiko Yamauchi, Hirotaka Ono, Shuji Kijima, and Masafumi Yamashita
    • Journal Title

      SIAM Journal on Computing

      Volume: 44 Issue: 3 Pages: 740-785

    • DOI

      10.1137/140958682

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Constructing Self-stabilizing Oscillators in Population Protocols2015

    • Author(s)
      Colin Cooper, Anissa Lamani, Giovanni Viglietta, Masafumi Yamashita, Yukiko Yamauchi
    • Journal Title

      Proc. of 17th International Symposium on Stabilization, Safety,and Security of Distributed Systems

      Volume: No volume number Pages: 187-200

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Forming sequences of geometric patterns with oblivious mobile robots2015

    • Author(s)
      Shantanu Das, Paola Flocchini, Nicola Santoro, Masafumi Yamashita
    • Journal Title

      Distributed Computing

      Volume: 28 Pages: 131-145

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Plane Formation by Synchronous Mobile Robots in the Three Dimensional Euclidean Space2015

    • Author(s)
      Yukiko Yamauchi, Taichi Uehara, Shuji Kijima, Masafumi Yamashita
    • Journal Title

      Proc. of International Symposium on Distributed Computing 2015

      Volume: No volume number Pages: 92-106

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Photo-regulation of constitutive gene expression in living cells by using ultrafast photo-cross-linking oligonucleotides2014

    • Author(s)
      Takashi Sakamoto, Atsuo Shigeno, Yuichi Ohtaki, Kenzo Fujimoto
    • Journal Title

      Biomaterials Science

      Volume: 2 Issue: 9 Pages: 1154-1157

    • DOI

      10.1039/c4bm00117f

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Short oligonucleotide prodrug having 5-fluoro and 5-iodouracil inhibits the proliferation of cancer cells in a photo-responsive manner2014

    • Author(s)
      Kenzo Fujimoto, Yu-ki Takematsu, Atsuo Shigeno, Mirei Furusawa, Takashi Sakamoto
    • Journal Title

      Bioorg. Med. Chem. Lett.

      Volume: 24 Issue: 16 Pages: 3736-3738

    • DOI

      10.1016/j.bmcl.2014.07.002

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Creation of DNA Array Structure Equipped with heat resistance by Ultrafast Photocrosslinking2014

    • Author(s)
      Shigetaka Nakamura, Kenzo Fujimoto
    • Journal Title

      Journal of Chemical Technology & Biotechnology

      Volume: 89 Issue: 7 Pages: 1086-1090

    • DOI

      10.1002/jctb.4205

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Activation energy of autonomous polymer chain with high LCST2014

    • Author(s)
      Yusuke Hara
    • Journal Title

      Advanced Materials Research

      Volume: 941 Pages: 1212-1215

    • DOI

      10.4028/www.scientific.net/amr.941-944.1212

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A self-oscillating polymer chain with high LCST2014

    • Author(s)
      Yusuke Hara
    • Journal Title

      Advanced Materials Research

      Volume: 941 Pages: 1208-1211

    • DOI

      10.4028/www.scientific.net/amr.941-944.1208

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Function and Autonomous Behavior of Self-Oscillating Polymer Systems2014

    • Author(s)
      Yusuke hara
    • Journal Title

      Polymers

      Volume: 6 Issue: 7 Pages: 1958-1971

    • DOI

      10.3390/polym6071958

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Randomized Pattern Formation Algorithm for Asynchronous Oblivious Mobile Robots2014

    • Author(s)
      Yukiko Yamauchi, Masafumi Yamashita
    • Journal Title

      Proceedings of the 28th International Symposium on Distributed Computing (DISC 2014)

      Volume: LNCS8784 Pages: 137-151

    • DOI

      10.1007/978-3-662-45174-8_10

    • ISBN
      9783662451731, 9783662451748
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular robots with sensors and intelligence2014

    • Author(s)
      Hagiya M, Konagaya A, Kobayashi S, Saito H, Murata S.
    • Journal Title

      Acc Chem Res

      Volume: 47 Issue: 6 Pages: 1681-1690

    • DOI

      10.1021/ar400318d

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Generative Force of Self-Oscillating Gel2014

    • Author(s)
      Y. Hara, H. Mayama, K. Morishima
    • Journal Title

      J. Phys. Chem. B

      Volume: 118 Issue: 9 Pages: 2576-2581

    • DOI

      10.1021/jp412806y

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Adhesion of Gels by silica particle2014

    • Author(s)
      H. Abe, Y. Hara, S. Maeda, S. Hashimoto
    • Journal Title

      J. Phys. Chem. B

      Volume: 118 Issue: 9 Pages: 2518-2522

    • DOI

      10.1021/jp410367v

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Design and motion control of self-propelled droplets2014

    • Author(s)
      A. Suzuki, S. Maeda, Y. Hara, S. Hashimoto
    • Journal Title

      Proceedings of The 27th IEEE International Conference on Micro Electro Mechanical Systems

      Volume: MEMS 2014 Pages: 310-313

    • DOI

      10.1109/memsys.2014.6765638

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Self-Oscillation of Polymer Chains with an Fe(bpy)3 Catalyst Induced by the Belousov-Zhabotinsky Reaction2014

    • Author(s)
      Y. Hara, K. Fujimoto, H. Mayama
    • Journal Title

      J. Phys. Chem. B

      Volume: 118 Issue: 2 Pages: 608-612

    • DOI

      10.1021/jp408435z

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Switching the Belousov-Zhabotinsky reaction with a Strong-Acid-Free Gel2014

    • Author(s)
      Y. Hara, Y. Yamaguchi, H. Mayama
    • Journal Title

      J. Phys. Chem. B

      Volume: 118 Issue: 2 Pages: 634-638

    • DOI

      10.1021/jp410915p

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Activation energy of the Belousov–Zhabotinsky reaction in a gel with Fe(bpy)3 catalyst2014

    • Author(s)
      Y. Hara, H. Mayama, Y. Yamaguchi, K. Fujimoto
    • Journal Title

      Chemistry Letters

      Volume: 43 (5) Pages: 673-675

    • NAID

      130004868109

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Details of the ultra-fast DNA photocrosslinking reaction of 3-cyanovinylcarbazole nucleoside; Cis-trans isomeric effect and the application for SNP based genotyping2013

    • Author(s)
      Kenzo Fujimoto, Asuka Yamada, Yoshinaga Yoshimura, Tadashi Tsukaguchi and Takashi Sakamoto
    • Journal Title

      J. Am. Chem. Soc.

      Volume: 135 Issue: 43 Pages: 1616-16167

    • DOI

      10.1021/ja406965f

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Geometric Effect on the Photocrosslinking Reaction between 3-Cyanovinylcarbazole Nucleoside and Pyrimidine Base in DNA/RNA Heteroduplex2013

    • Author(s)
      Kenzo Fujimoto, Satomi Kishi and Takashi Sakamoto
    • Journal Title

      Photochemistry and Photobiology

      Volume: 89 Issue: 5 Pages: 1095-1099

    • DOI

      10.1111/php.12118

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quick and Reversible Photocrosslinking Reaction of 3-Cyanovinylcarbazole Nucleoside in DNA Triplex2013

    • Author(s)
      Kenzo Fujimoto, Hiroki Yoshinaga, Yasumasa Yoshio and Takashi Sakamoto
    • Journal Title

      Organic & Biomolecular Chemistry

      Volume: 11 Issue: 31 Pages: 5065-5068

    • DOI

      10.1039/c3ob40915e

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Surface modification method for adhesion of gels2013

    • Author(s)
      H. Abe, Y. Hara, S. Maeda, S. Hashimoto
    • Journal Title

      Chemistry Letters

      Volume: 43 Issue: 2 Pages: 243-245

    • DOI

      10.1246/cl.130905

    • NAID

      130004867976

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct Observation of Periodic Swelling and Collapse of Polymer Chain Induced by the Belousov-Zhabotinsky Reaction2013

    • Author(s)
      Y. Hara, H. Mayama, Y. Yamaguchi, Y. Takenaka and R. Fukuda
    • Journal Title

      J. Phys. Chem. B

      Volume: 117 Issue: 46 Pages: 14351-14357

    • DOI

      10.1021/jp408417h

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Rendezvous of Two Robots with Constant Memory2013

    • Author(s)
      Paola Flocchini, Nicola Santoro, Giovanni Viglietta, Masafumi Yamashita
    • Journal Title

      Proceedings of the 20th International Colloquium on Structural Information and Communication Complexity

      Volume: LNCS 8179 Pages: 189-200

    • DOI

      10.1007/978-3-319-03578-9_16

    • ISBN
      9783319035772, 9783319035789
    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Pattern Formation by Mobile Robots with Limited Visibility2013

    • Author(s)
      Yukiko Yamauchi and Masafumi Yamashita
    • Journal Title

      Proceedings of the 20th International Colloquium on Structural Information and Communication Complexity

      Volume: LNCS 8179 Pages: 201-212

    • DOI

      10.1007/978-3-319-03578-9_17

    • ISBN
      9783319035772, 9783319035789
    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] On Space Complexity of Self-Stabilizing Leader Election in Population Protocol Based on k-interaction2013

    • Author(s)
      Xiaoguang Xu, Yukiko Yamauchi, Shuji Kijima and Masafumi Yamashita On Space Complexity of Self-Stabilizing Leader Election in Population Protocol Based on k-interaction
    • Journal Title

      Proceedings of the 15th International Symposium on Stabilization, Safety, and Security of Distributed Systems

      Volume: LNCS 8255 Pages: 86-97

    • DOI

      10.1007/978-3-319-03089-0_7

    • ISBN
      9783319030883, 9783319030890
    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Enumeration Approach to Computing Chemical Equilibria2013

    • Author(s)
      Satoshi Kobayashi
    • Journal Title

      Theoretical Computer Science

      Volume: 499 Pages: 51-87

    • DOI

      10.1016/j.tcs.2013.05.017

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quick, Selective and Reversible Photocrosslinking Reaction between 5-Methylcytosine and 3-Cyanovinylcarbazole in DNA Double Strand2013

    • Author(s)
      Kenzo Fujimoto
    • Journal Title

      Int. J. Mol. Sci.

      Volume: 14(3) Issue: 3 Pages: 5765-5774

    • DOI

      10.3390/ijms14035765

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Diamine Derivatives Accelerate Photochemical C→U Transition in DNA Double Strand2013

    • Author(s)
      Kenzo Fujimoto
    • Journal Title

      Chem. Lett.

      Volume: 42 Issue: 3 Pages: 289-291

    • DOI

      10.1246/cl.2013.289

    • NAID

      10031155783

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular Robotics: A New Paradigm for Artifacts2013

    • Author(s)
      S. Murata
    • Journal Title

      New Generation Computing

      Volume: 31 Issue: 1 Pages: 27-45

    • DOI

      10.1007/s00354-012-0121-z

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quick Regulation of mRNA Functions by a Few Seconds of Photoirradiation,2012

    • Author(s)
      Atsuo Shigeno
    • Journal Title

      Organic & Biomolecular Chemistry

      Volume: 10(38) Issue: 38 Pages: 7820-7825

    • DOI

      10.1039/c2ob25883h

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Specific and reversible photochemical labeling of plasmid DNA using photoresponsive oligonucleotides containing 3-cyanovinylcarbazole2012

    • Author(s)
      Kenzo Fujimoto
    • Journal Title

      Molecular BioSystems

      Volume: 8 (2) Issue: 2 Pages: 491-494

    • DOI

      10.1039/c2mb05422a

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Template Directed Reversible Photochemical Ligation of Oligodeoxynucleotides2012

    • Author(s)
      Shigetaka Nakamura
    • Journal Title

      Molecules

      Volume: 17 Issue: 1 Pages: 163-178

    • DOI

      10.3390/molecules17010163

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Activation Energy of Aggregation-Disaggregation Self-Oscillation of Polymer Chain2012

    • Author(s)
      Yusuke Hara and Rumana A. Jahan
    • Journal Title

      Int. J. Mol. Sci.

      Volume: 13(12) Pages: 16281-16290

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Asynchronous pattern formation by anonymous oblivious mobile robots2012

    • Author(s)
      Nao Fujinaga, Yukiko Yamauchi, Shuji Kijima, and Masafumi Yamashita
    • Journal Title

      Proceedings of the 26th International Symposium on Distributed Computing (DISC 2012)

      Volume: 1

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] On the properties of language classes defined by bounded reaction automata2012

    • Author(s)
      Fumiya Okubo, Satoshi Kobayashi, Takashi Yokomori
    • Journal Title

      Theoretical Computer Science

      Volume: 454 Pages: 206-221

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 生体・分子”感”相互作用の諸相2017

    • Author(s)
      鈴木泰博
    • Organizer
      国際高等研究所プロジェクト「綜合コミュニケーション学」第6回研究会
    • Place of Presentation
      国際高等研究所(京都府・京都市)
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 分子ロボットの知能創出にむけて2017

    • Author(s)
      鈴木泰博
    • Organizer
      NI-SIGNAC-CCS合同研究会
    • Place of Presentation
      東京工業大学(東京都・目黒区)
    • Related Report
      2016 Annual Research Report
  • [Presentation] Development of photochemical DNA and RNA manipulation toward for nucleic acid-based drug2016

    • Author(s)
      Kenzo Fujimoto
    • Organizer
      The 39th Annual Meeting of Molecular Biology Society of Japan
    • Place of Presentation
      パシフィコ横浜(神奈川県・横浜市)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] 好熱性細菌を対象としたリボソームの立体構造比較2016

    • Author(s)
      若林優太,小宮健,山村雅幸
    • Organizer
      極限環境生物学会2016年度(第17回)年会
    • Place of Presentation
      東京工業大学(神奈川県・横浜市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] 翻訳機構の進化過程解明に向けたリボソームの立体構造比較2016

    • Author(s)
      小宮健,若林優太,山村雅幸
    • Organizer
      「細胞を創る」研究会9.0
    • Place of Presentation
      早稲田大学(東京都・新宿区)
    • Year and Date
      2016-11-21
    • Related Report
      2016 Annual Research Report
  • [Presentation] アンチジーン法に向けた光誘起型Double duplex 構造の形成2016

    • Author(s)
      中村重孝、藤本健造
    • Organizer
      日本核酸医薬学会第2回年会
    • Place of Presentation
      東京理科大(東京都・葛飾区)
    • Year and Date
      2016-11-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] C→U transition in DNA duplex using 3-vinylcarbazole analog mediated reversible photo-cross-linking2016

    • Author(s)
      Yasuharu Takashima, Shigetaka Nakamura, Kenzo Fujimoto
    • Organizer
      The 43rd International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      熊本大学(熊本県・熊本市)
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] RNA FISH using 3-cyanovinylcarbazole-modified ODNs as photo-cross-linking probe2016

    • Author(s)
      Kano Chinami, Kei Toyosato, Takashi Sakamoto, Kenzo Fujimoto
    • Organizer
      The 43rd International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      熊本大学(熊本県・熊本市)
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Effects of hydrogen bonding on the cytosine deamination in photo-cross-linked DNA duplex2016

    • Author(s)
      Siddhant Sethi, Minako Ooe, Takashi Sakamoto, Kenzo Fujimoto
    • Organizer
      The 43rd International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      熊本大学(熊本県・熊本市)
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Detection of DNA B-Z transition by 19F NMR based on 19F chemical shift change2016

    • Author(s)
      Hui Yang, Chihiro Hirata, Shigetaka Nakamura, Kenzo Fujimoto
    • Organizer
      43rd International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      熊本大学(熊本県・熊本市)
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The effect of 5-substitution of pyrimidine base in DNA photo-cross-linking using 3-cyanovinylcarbazole2016

    • Author(s)
      Shigetaka Nakamura, Hayato Kawabata, Hodaka Muramatsu, Kenzo Fujimoto
    • Organizer
      The 43rd International Symposium on Nucleic Acids Chemistry
    • Place of Presentation
      熊本大学(熊本県・熊本市)
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Construction of an isothermal DNA amplification reaction system for simplified nucleic acid test2016

    • Author(s)
      K. Komiya, C. Noda, M. Komori, K. Dong, T. Takenaka, T. Enomoto, T. Yoshimura, M. Yamamura
    • Organizer
      第10回バイオ関連化学シンポジウム
    • Place of Presentation
      石川県立音楽堂(石川県・金沢市)
    • Year and Date
      2016-09-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] Autonomous and Programmable Strand Generator Implemented as DNA Chemical Reaction Network2016

    • Author(s)
      I. Kawamata, S. Kawakami, Y.-C. Chen, S. Hiratsuka, S. Aradachi, D. Tamatsuki, H. Yuuki, T. Takahashi, E. Ishihara, S. Imai, H. Otaka, Y. Otaki, K. Suzuki, T. Watanabe, K. Komiya, F. Takabatake, S. Nomura, S. Murata
    • Organizer
      22nd International Meeting on DNA Computing and Molecular Programming
    • Place of Presentation
      Munich(Germany)
    • Year and Date
      2016-09-04
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Towards a Theory of Formal Distributed Systems2016

    • Author(s)
      Masafumi Yamashita
    • Organizer
      The 23rd International Colloquium on Structural Information and Communication Complexity
    • Place of Presentation
      Helsinki (Finland)
    • Year and Date
      2016-07-19
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 核酸医薬を指向した光化学的RNA編集法の開発2016

    • Author(s)
      藤本健造
    • Organizer
      第55回日本生体医工学会大会
    • Place of Presentation
      富山国際会議場(富山県・富山市)
    • Year and Date
      2016-04-26
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Analysis and Design of a Single-Molecule DNA Nanodevice for Thermal Band-Pass Filters2016

    • Author(s)
      J. A. Rose, K. Komiya
    • Organizer
      The 11th Annual IEEE International Conference on Nano/Micro Engineered and Molecular Systems
    • Place of Presentation
      ホテル松島大観荘(宮城県・宮城郡)
    • Year and Date
      2016-04-17
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Chemical Reaction Networks by using Strand displacement reactions and its application for Molecular Robotics2016

    • Author(s)
      Yasuhiro Suzuki
    • Organizer
      International Symposium on Artificial Life and Robotics
    • Place of Presentation
      大分県 別府市
    • Year and Date
      2016-01-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Chemical Evolution in Computational Proto-Cells2016

    • Author(s)
      Yasuhiro Suzuki
    • Organizer
      ELSI Seminar
    • Place of Presentation
      東京工業大学(東京都・目黒区)
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] A Neural Network by Using Self-Reinforcement Reactions2016

    • Author(s)
      Yasuhiro Suzuki
    • Organizer
      10th International Workshop on Natural Computing
    • Place of Presentation
      国際教養大学(秋田県・秋田市)
    • Related Report
      2016 Annual Research Report
  • [Presentation] Harness nature for computing2016

    • Author(s)
      Yasuhiro Suzuki
    • Organizer
      Proto-computation and Proto-life Workshop
    • Place of Presentation
      マサチューセッツ州ケンブリッジ(米国)
    • Related Report
      2016 Annual Research Report
  • [Presentation] Development of a Novel Fluorescence In Situ Hybridization Method Using Photoreactive Oligonuculeotide as a Fluorescent Probe2015

    • Author(s)
      Kei Toyosato, Takashi Sakamoto, Kenzo Fujimoto
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2015-12-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] DNAシグナル生成反応の展開2015

    • Author(s)
      小宮健
    • Organizer
      第59回分子生物情報研究会(SIG-MBI)
    • Place of Presentation
      神奈川県、横浜市
    • Year and Date
      2015-11-14
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] New insight of Engineering Expression System based on ultrafast DNA and RNA photo-cross-linking2015

    • Author(s)
      Shigetaka Nakamura, Kenzo Fujimoto
    • Organizer
      PEGS Europe 2015
    • Place of Presentation
      Lisbon, Portugal
    • Year and Date
      2015-11-03
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Toward Efficient Computation of Chemical Equilibria of Interacting Nucleic Acid Strands Including Pseudoknots2015

    • Author(s)
      Mizuki Yokoshima, Satoshi Kobayashi
    • Organizer
      Chem-Bio Informatics Society(CBI) Annual Meeting 2015
    • Place of Presentation
      東京都江戸川区
    • Year and Date
      2015-10-28
    • Related Report
      2015 Annual Research Report
  • [Presentation] Toward Design and Analysis of Analog Computing Chemical Reaction Circuits2015

    • Author(s)
      Daiki Matsuwaki, Satoshi Kobayashi
    • Organizer
      Chem-Bio Informatics Society(CBI) Annual Meeting 2015
    • Place of Presentation
      東京都江戸川区
    • Year and Date
      2015-10-28
    • Related Report
      2015 Annual Research Report
  • [Presentation] Construction of a DNA Generation Circuit for a Molecular Robot2015

    • Author(s)
      Ken Komiya, Chizuru Noda, Masayuki Yamamura
    • Organizer
      CBI学会2015年大会
    • Place of Presentation
      東京都江戸川区
    • Year and Date
      2015-10-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] Construction of a DNA generation reaction system for autonomous DNA-based computing at a physiological temperature2015

    • Author(s)
      Ken Komiya, Kesu Dong, Toshio Takenaka, Masayuki Yamamura
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      石川県、金沢市
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Development about 19F chemical shift imaging of DNA conformation change2015

    • Author(s)
      Kenzo Fujimoto
    • Organizer
      World Molecular Imaging Congress (WMIC2015)
    • Place of Presentation
      Hawaii, USA
    • Year and Date
      2015-09-02
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 抽象化学系による計算とその展開2015

    • Author(s)
      鈴木泰博
    • Organizer
      日本コンピュータ化学会秋期大会
    • Place of Presentation
      北海道、函館市
    • Year and Date
      2015-09-01
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Some remarks on the Chemical Reaction Networks implemented by using DNA2015

    • Author(s)
      Yasuhiro Suzuki
    • Organizer
      International Conference on DNA Computing and Molecular Programming
    • Place of Presentation
      Harvard Univ., USA
    • Year and Date
      2015-07-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 高感度核酸検査に向けた等温指数増幅反応系の構築2015

    • Author(s)
      小宮健,他5名
    • Organizer
      日本化学会第95春季年会
    • Place of Presentation
      日本大学理工学部 船橋キャンパス, 船橋市
    • Year and Date
      2015-03-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] オンライン木探索アルゴリズム2015

    • Author(s)
      八神貴裕,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      火の国情報シンポジウム2015
    • Place of Presentation
      佐賀大学
    • Year and Date
      2015-03-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] 直線上のデータ配送問題に対する多項式時間計算可能性2015

    • Author(s)
      三重野琢也,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      火の国情報シンポジウム2015
    • Place of Presentation
      佐賀大学
    • Year and Date
      2015-03-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] 3次元空間中の自律分散ロボットによる平面合意問題2015

    • Author(s)
      上原太一,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      火の国情報シンポジウム2015
    • Place of Presentation
      佐賀大学
    • Year and Date
      2015-03-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] The team assembling problem for heterogeneous mobile robots2015

    • Author(s)
      Zhiqiang Liu,Yukiko Yamauchi, Shuji Kijima, and Masafumi Yamashita
    • Organizer
      2014年度 冬のLAシンポジウム
    • Place of Presentation
      京都大学数理解析研究所
    • Year and Date
      2015-01-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] Space complexity of self-stabilizing leader election in population protocol on hypernetworks2015

    • Author(s)
      Xiaoguang Xu,Yukiko Yamauchi, Shuji Kijima, and Masafumi Yamashita
    • Organizer
      2014年度 冬のLAシンポジウム
    • Place of Presentation
      京都大学数理解析研究所
    • Year and Date
      2015-01-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] Reaction Graphs Controlled by External Signals2014

    • Author(s)
      Youji Hasegawa, Satoshi Kobayashi
    • Organizer
      2015 CBI学会全国大会
    • Place of Presentation
      タワーホール船堀, 東京
    • Year and Date
      2014-10-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] On Time Responsive DNA Analog Computing Devices2014

    • Author(s)
      Satoshi Kobayashi, Kazuya Yanagibashi
    • Organizer
      2015 CBI学会全国大会
    • Place of Presentation
      タワーホール船堀, 東京
    • Year and Date
      2014-10-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] DNAナノマシンによる歩行動作の温度特性の検証2014

    • Author(s)
      外舘悠仁,小宮健,山村雅幸
    • Organizer
      日本機械学会 第6回マイクロ・ナノ工学シンポジウム
    • Place of Presentation
      くにびきメッセ,松江市
    • Year and Date
      2014-10-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] DNA応答型ナノマシンの動作を指定するDNAシグナル生成機構の構築2014

    • Author(s)
      小宮健,山村雅幸
    • Organizer
      日本機械学会 第6回マイクロ・ナノ工学シンポジウム
    • Place of Presentation
      くにびきメッセ,松江市
    • Year and Date
      2014-10-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] 化学反応を駆動源とする自励振動ゲルポンプの開発2014

    • Author(s)
      原雄介
    • Organizer
      第6回マイクロ・ナノ工学シンポジウム
    • Place of Presentation
      くにびきメッセ,松江市
    • Year and Date
      2014-10-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] 分子ロボットのための化学反応回2014

    • Author(s)
      小林 聡
    • Organizer
      第6回マイクロ・ナノ工学シンポジウム
    • Place of Presentation
      くにびきメッセ,松江市
    • Year and Date
      2014-10-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] Analog DNA Computing Devices Toward the Control of Molecular Robots2014

    • Author(s)
      Satoshi Kobayashi, Kazuya Yanagibashi, Kenzo Fujimoto, Ken Komiya and Masami Hagiya
    • Organizer
      Workshop on Self-organization in Swarm of Robots: from Molecular Robots to Mobile Agents (WSSR 2014)
    • Place of Presentation
      Todaiji Culture Center, Nara
    • Year and Date
      2014-10-06
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Locomotion of Metamorphic Robotic System based on Local Information2014

    • Author(s)
      Fengqi Chen, Yukiko Yamauchi, Shuji Kijima and Masafumi Yamashita
    • Organizer
      Workshop on Self-organization in Swarm of Robots: from Molecular Robots to Mobile Agents
    • Place of Presentation
      Todaiji Culture Center, Nara
    • Year and Date
      2014-10-06
    • Related Report
      2014 Annual Research Report
  • [Presentation] Implementation of in vitro intelligence for real-time operation of molecular robots2014

    • Author(s)
      Ken Komiya
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター,札幌市
    • Year and Date
      2014-09-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] A Sequential DNA Generation Circuit for Directing DNA Nanomachines2014

    • Author(s)
      Ken Komiya, Erimi Harada and Masayuki Yamamura
    • Organizer
      Proceedings of Twentieth International Meeting on DNA Computing and Molecular Programming (DNA20)
    • Place of Presentation
      Kyoto Univ., Kyoto
    • Year and Date
      2014-09-22 – 2014-09-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] Photochemical regulation of DNA strand exchange using DNA photocrosslinking2014

    • Author(s)
      Shigetaka Nakamura, Hirokazu Hashimoto, Kenzo Fujimoto
    • Organizer
      20th International Conference on DNA Computing and Molecular Programming (DNA20)
    • Place of Presentation
      Kyoto Univ., Kyoto
    • Year and Date
      2014-09-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 化学反応を駆動源とするゲルアクチュエータの開発とラボオンチップへの応用2014

    • Author(s)
      原雄介
    • Organizer
      複合材料懇話会
    • Place of Presentation
      群馬大学
    • Year and Date
      2014-09-05
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Improvement of thermal stability of DNA structure by photocrosslinking reaction using 3-cyanovinylcarbazole2014

    • Author(s)
      Shigetaka Nakamura, Kenzo Fujimoto
    • Organizer
      Challenges in Nanoscience ISACS 15
    • Place of Presentation
      San Diego, USA
    • Year and Date
      2014-08-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] Creation of DNA Array Structure Equipped with Heat Resistanve by Ultrafast Pyotocroslinking Using 3-cyanovinylcarbazole2014

    • Author(s)
      Kenzo Fujimoto
    • Organizer
      XXVth IUPAC ON PHOTOCHEMISTRY
    • Place of Presentation
      Bordeaux, France
    • Year and Date
      2014-07-15
    • Related Report
      2014 Annual Research Report
  • [Presentation] Implementation of in vitro intelligence for real-time operation of molecular robots2014

    • Author(s)
      Ken Komiya
    • Organizer
      第52回日本生物物理学会年会
    • Place of Presentation
      札幌コンベンションセンター,札幌
    • Related Report
      2013 Annual Research Report
  • [Presentation] 鎖置換反応ダイナミクスを利用したアナログコンピュータの構築に向けて2014

    • Author(s)
      小林聡,柳橋一哉,小宮健,藤本健造
    • Organizer
      分子ロボティクス研究会
    • Place of Presentation
      電気通信大学,東京
    • Related Report
      2013 Annual Research Report
  • [Presentation] 超高速光DNA・RNA操作法の開発2013

    • Author(s)
      藤本健造
    • Organizer
      バイオアカデミックフォーラム2013
    • Place of Presentation
      東京ビッグサイト, 東京
    • Related Report
      2013 Annual Research Report
  • [Presentation] 自励振動型高分子の水和・脱水和振動の直接観察2013

    • Author(s)
      原雄介、眞山博幸、山口佳則、武仲能子
    • Organizer
      第23回「非線形反応と協同現象」研究会
    • Place of Presentation
      北海道大学,札幌市
    • Related Report
      2013 Annual Research Report
  • [Presentation] 完全人工合成型ケミカルロボットの創製2013

    • Author(s)
      原雄介
    • Organizer
      「細胞を創る」研究会 6.0
    • Place of Presentation
      先端研究産業支援センター,鶴岡市
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] 化学反応を駆動源とする自励振動ゲルアクチュエータの開発とマイクロ流体素子への応用2013

    • Author(s)
      原雄介
    • Organizer
      マイクロ・ナノ医療機器開発研究会 第5回研究会
    • Place of Presentation
      科学技術交流財団 研究交流センター,名古屋
    • Related Report
      2013 Annual Research Report
  • [Presentation] 自励駆動するゲルアクチュエータの開発とマイクロ流体素子への応用研究2013

    • Author(s)
      原雄介
    • Organizer
      福岡工業大学講演会
    • Place of Presentation
      福岡工業大学,福岡
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Construction of a DNA-based stimuli-responsive microhydrogel2013

    • Author(s)
      Takashi Kitajima, Ken Komiya, Masayuki Hayakawa, Masahiro Takinoue and Masayuki Yamamura
    • Organizer
      Nineteenth International Meeting on DNA Computing and Molecular Programming
    • Place of Presentation
      Arizona State University, Tempe
    • Related Report
      2013 Annual Research Report
  • [Presentation] Implementation of in vitro intelligence for controlling molecular robots2013

    • Author(s)
      Ken Komiya
    • Organizer
      第51回日本生物物理学会年会
    • Place of Presentation
      京都国際会議場, 京都
    • Related Report
      2013 Annual Research Report
    • Invited
  • [Presentation] Introduction of DNA nanodevices into a hydrogel for achieving its stimuli-responsive behavior2013

    • Author(s)
      Takashi Kitajima, Ken Komiya, Masayuki Hayakawa, Masahiro Takinoue and Masayuki Yamamura
    • Organizer
      51回日本生物物理学会年会
    • Place of Presentation
      京都国際会議場,京都
    • Related Report
      2013 Annual Research Report
  • [Presentation] 血小板摸倣システムに向けたDNA架橋ハイドロゲルの作成2013

    • Author(s)
      北島貴司,小宮健,早川雅之,森田雅宗,瀧ノ上正浩,山村雅幸
    • Organizer
      「細胞を創る」研究会6.0
    • Place of Presentation
      慶應義塾大学鶴岡タウンキャンパス,鶴岡市
    • Related Report
      2013 Annual Research Report
  • [Presentation] VEAM: 研究者と市民をつなぐ科学知識の視覚化2013

    • Author(s)
      小宮健
    • Organizer
      「細胞を創る」研究会6.0
    • Place of Presentation
      慶應義塾大学鶴岡タウンキャンパス,鶴岡市
    • Related Report
      2013 Annual Research Report
  • [Presentation] Progress in Enumeration Approach to Computing Chemical Equilibrium of Interacting Nucleic Acid Strand2013

    • Author(s)
      Satoshi Kobayashi
    • Organizer
      CBI学会2014年大会
    • Place of Presentation
      タワーホール船堀,東京
    • Related Report
      2013 Annual Research Report
  • [Presentation] Biomolecular Rocket2012

    • Author(s)
      星健介,厚美佑輔,齋藤健,山下仁義,松戸里紗,番匠康雄,小長谷明彦,木 賀大介,山村雅幸,小宮健,瀧ノ上正浩
    • Organizer
      「細胞を創る」研究会5.0
    • Place of Presentation
      横浜
    • Related Report
      2012 Annual Research Report
  • [Presentation] Construction of a nucleic-acid-responsive DNA synthesis system for diagnostic DNA-based computing2012

    • Author(s)
      Ken Komiya, Asako Kobayashi and Masayuki Yamamura
    • Organizer
      第50回日本生物物理学会年会
    • Place of Presentation
      名古屋
    • Related Report
      2012 Annual Research Report
  • [Presentation] Analog DNA Devices for Computation and Control of Molecular Robots

    • Author(s)
      Satoshi Kobayashi, Kazuya Yanagibashi, Masami Hagiya
    • Organizer
      Workshop on Self-organization in Swarm of Robots: from Molecular Robots to Mobile Agents
    • Place of Presentation
      東大寺文化センター, 奈良
    • Related Report
      2013 Annual Research Report
  • [Presentation] Development about Photochemical RNA

    • Author(s)
      Kenzo Fujimoto
    • Organizer
      14th RNA Meeting
    • Place of Presentation
      Tohoku University
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 光化学的なDNA及びRNA操作法の開発

    • Author(s)
      藤本健造
    • Organizer
      関西大学 研究部門発表会
    • Place of Presentation
      関西大学
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Development of Nucleic Acids Based Probes for the 19F MRI/MRS of Biomolecules

    • Author(s)
      Kenzo Fujimoto
    • Organizer
      World Molecular Imaging Congress (WMIC2012)
    • Place of Presentation
      Doublin, Irland
    • Related Report
      2012 Annual Research Report
  • [Presentation] 分子ロボットの知能

    • Author(s)
      小宮健
    • Organizer
      計測自動制御学会 システム・情報部門 学術講演会 2012 (SSI2012)
    • Place of Presentation
      名古屋
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 分子ロボットの実現に向けたDNA論理ゲートの現状と課題

    • Author(s)
      小宮健
    • Organizer
      人工知能学会合同研究会 第51回分子生物情報研究会(SIG-MBI)
    • Place of Presentation
      横浜
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 外部制御装置・外部電源フリーの自励振動ゲルアクチュエータの開発

    • Author(s)
      原 雄介
    • Organizer
      第5回連携促進フォーラム
    • Place of Presentation
      秋葉原・コンベンションホール
    • Related Report
      2012 Annual Research Report
  • [Presentation] Autonomous polymer actuators

    • Author(s)
      Yusuke Hara
    • Organizer
      AROB 18th
    • Place of Presentation
      Daejeon ,Korea
    • Related Report
      2012 Annual Research Report
  • [Presentation] ポリマー鎖自励振動の活性化エネルギーに関する研究

    • Author(s)
      原 雄介
    • Organizer
      第22回「非線形反応と協同現象」研究会
    • Place of Presentation
      お茶の水女子大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] Chemical Energy-driven Soft Robots -Molecular Design and Functional Control of Novel Self-Oscillating Polymers-

    • Author(s)
      Yusuke Hara
    • Organizer
      Let’s Talk about the Future of Robotics
    • Place of Presentation
      Tohoku University
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Capsule gel robot driven by self-propelled oil droplet

    • Author(s)
      Aya Suzuki, Shingo Maeda, Yusuke Hara, Shuji Hashimoto
    • Organizer
      IEEE/RSJ International Conference on Intelligent Robots and Systems
    • Place of Presentation
      Portugal
    • Related Report
      2012 Annual Research Report
  • [Presentation] 油滴の自発的駆動を用いたカプセルゲルロボット

    • Author(s)
      鈴木彩, 前田真吾, 原 雄介, 橋本周司
    • Organizer
      第30回日本ロボット学会学術講演会
    • Place of Presentation
      札幌コンベンションセンター
    • Related Report
      2012 Annual Research Report
  • [Presentation] BS反応とのカップリングによる管状ゲルの蠕動運動

    • Author(s)
      三ヶ野原崇士, 前田真吾, 原 雄介, 橋本周司
    • Organizer
      第30回日本ロボット学会学術講演会
    • Place of Presentation
      札幌コンベンションセンター
    • Related Report
      2012 Annual Research Report
  • [Presentation] Autonomous Gel Actuators for Soft Robot

    • Author(s)
      Yusuke Hara
    • Organizer
      Workshop on Yawarakai Robot
    • Place of Presentation
      AIST
    • Related Report
      2012 Annual Research Report
  • [Presentation] 新規自励振動型ポリマーの振動挙動に関する研究

    • Author(s)
      原 雄介, 眞山博幸
    • Organizer
      第6 回自己組織化討論会
    • Place of Presentation
      つくばセミナーハウス
    • Related Report
      2012 Annual Research Report
  • [Presentation] On Space Complexity of Self-Stabilizing Leader Election in Population Protocol Based on Three-interaction

    • Author(s)
      Xiaoguang Xu, Yukiko Yamauchi, Shuji Kijima, and Masafumi Yamashita
    • Organizer
      第143回アルゴリズム研究会
    • Place of Presentation
      福島
    • Related Report
      2012 Annual Research Report
  • [Presentation] 複数ストリーム間の特徴比較に対する乱択アルゴリズム

    • Author(s)
      園田尚人,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      2012年度 冬のLAシンポジウム
    • Place of Presentation
      京都
    • Related Report
      2012 Annual Research Report
  • [Presentation] 動的グラフ上のランダムウォークの到達時間と全訪問時間

    • Author(s)
      木場孝輔,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      2012年度 冬のLAシンポジウム
    • Place of Presentation
      京都
    • Related Report
      2012 Annual Research Report
  • [Presentation] 無理数遷移確率を許すランダムウォークの脱乱択化

    • Author(s)
      白髪丈晴,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      2012年度 冬のLAシンポジウム
    • Place of Presentation
      京都
    • Related Report
      2012 Annual Research Report
  • [Presentation] 分散システムでの剛性グラフに対する局所交換可能性

    • Author(s)
      タウフィックラチマン,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      2012年度 冬のLAシンポジウム
    • Place of Presentation
      京都
    • Related Report
      2012 Annual Research Report
  • [Presentation] 森および連結全域部分グラフの乱択近似数え上げ

    • Author(s)
      三原勇治,山内由紀子, 来嶋秀治, 山下雅史
    • Organizer
      2012年度 冬のLAシンポジウム
    • Place of Presentation
      京都
    • Related Report
      2012 Annual Research Report
  • [Presentation] 知能を実現する化学反応回路の構築を目指して

    • Author(s)
      小林 聡
    • Organizer
      生命医薬情報学連合大会
    • Place of Presentation
      東京
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 分子ロボットに知性は実現できるか -計算論的立場から-

    • Author(s)
      小林 聡
    • Organizer
      人工知能学会合同研究会 第51回分子生物情報研究会(SIG-MBI)
    • Place of Presentation
      横浜
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] グラフによる分子種の数え上げと化学反応系の解析

    • Author(s)
      小林 聡
    • Organizer
      「細胞を創る」研究会5.0
    • Place of Presentation
      横浜
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 分子ロボティクス --- 感覚と知能を備えた分子ロボットの創成 ---

    • Author(s)
      小林 聡
    • Organizer
      計測自動制御学会 システム・情報部門 学術講演会 2012 (SSI2012)
    • Place of Presentation
      名古屋
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] DNA を用いた組み合わせ回路の高速化について

    • Author(s)
      小林 聡, 長沢亮平,廣瀬亮
    • Organizer
      第92回数理モデル化と問題解決研究会
    • Place of Presentation
      佐賀県武雄市
    • Related Report
      2012 Annual Research Report
  • [Book] Chapter7 "Photo-Cross-Linking reaction in Nucleic Acids: Chemistry and Applications" of "Modified Nucleic Acids"2016

    • Author(s)
      Takashi Sakamoto, Kenzo Fujimoto
    • Publisher
      Springer
    • Related Report
      2016 Annual Research Report
  • [Book] DNA分子デザインのすべて~BIOMOD虎の巻~2016

    • Author(s)
      村田智, 浜田省吾, 小宮健, ほか全21名
    • Total Pages
      224
    • Publisher
      情報計算化学生物学会(CBI学会)出版
    • Related Report
      2016 Annual Research Report
  • [Book] 自然計算へのいざない2015

    • Author(s)
      編著:小林 聡、萩谷昌己、横森 貴
    • Total Pages
      210
    • Publisher
      近代科学社
    • Related Report
      2015 Annual Research Report
  • [Book] Proc. of DNA Computing and Molecular Programming, 20th International Conference2014

    • Author(s)
      Satoshi Murata, Satoshi Kobayashi, Editors
    • Total Pages
      160
    • Publisher
      Springer-Verlag
    • Related Report
      2014 Annual Research Report
  • [Remarks] 新学術領域「分子ロボティクス」

    • URL

      http://www.molecular-robotics.org

    • Related Report
      2013 Annual Research Report
  • [Patent(Industrial Property Rights)] アンチジーン法用光応答性人工核酸プローブ2016

    • Inventor(s)
      藤本健造、中村重孝
    • Industrial Property Rights Holder
      北陸先端科学技術大学院大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2016-105622
    • Filing Date
      2016-05-28
    • Related Report
      2016 Annual Research Report
  • [Patent(Industrial Property Rights)] 光架橋核酸二重鎖の光架橋を光開裂させる方法2014

    • Inventor(s)
      藤本健造, 中村重孝
    • Industrial Property Rights Holder
      北陸先端科学技術大学院大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2014-224574
    • Filing Date
      2014-11-14
    • Related Report
      2014 Annual Research Report
  • [Patent(Industrial Property Rights)] 鎖交換された二重鎖オリゴヌクレオチドの製造方法2013

    • Inventor(s)
      藤本健造、中村重孝、橋本浩寿、小林聡
    • Industrial Property Rights Holder
      北陸先端科学技術大学院大学、電気通信大学
    • Industrial Property Rights Type
      特許
    • Filing Date
      2013-06-25
    • Related Report
      2013 Annual Research Report
  • [Patent(Industrial Property Rights)] 光クロスリンク能を有する光応答性ヌクレオチドアナログ2013

    • Inventor(s)
      藤本健造、坂本隆、 田中佑弥
    • Industrial Property Rights Holder
      北陸先端科学技術大学院大学
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2013-070381
    • Filing Date
      2013-03-28
    • Related Report
      2012 Annual Research Report

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Published: 2012-11-27   Modified: 2019-07-29  

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