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Analyses of intracellular signaling in plant

Planned Research

Project AreaPlant cell wall as information-processing system
Project/Area Number 24114009
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKumamoto University

Principal Investigator

Sawa Shinichiro  熊本大学, 大学院先端科学研究部(理), 教授 (00315748)

Co-Investigator(Kenkyū-buntansha) 相田 光宏  奈良先端科学技術大学院大学, バイオサイエンス研究科, 准教授 (90311787)
Project Period (FY) 2012-06-28 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥126,880,000 (Direct Cost: ¥97,600,000、Indirect Cost: ¥29,280,000)
Fiscal Year 2016: ¥28,730,000 (Direct Cost: ¥22,100,000、Indirect Cost: ¥6,630,000)
Fiscal Year 2015: ¥28,730,000 (Direct Cost: ¥22,100,000、Indirect Cost: ¥6,630,000)
Fiscal Year 2014: ¥28,860,000 (Direct Cost: ¥22,200,000、Indirect Cost: ¥6,660,000)
Fiscal Year 2013: ¥28,730,000 (Direct Cost: ¥22,100,000、Indirect Cost: ¥6,630,000)
Fiscal Year 2012: ¥11,830,000 (Direct Cost: ¥9,100,000、Indirect Cost: ¥2,730,000)
Keywordsシロイヌナズナ / 細胞外 / 細胞壁 / ペプチド / 植物感染性線虫 / 線虫感染 / 茎頂分裂組織 / CLE / CUC / サツマイモネコブセンチュウ / 細胞間相互作用 / 植物細胞壁 / 分裂組織 / センチュウ感染 / 生物間相互作用 / インテリジェント / 内生プログラム
Outline of Final Research Achievements

Plant cell wall is regarded as not only a dynamic structure responsible for the regulation of plant growth and differentiation, but as an intelligent system capable of processing information from the environment. To date, we do not understand the molecular mechanisms that render the cell wall capable of mediating information processing and self-regulation.
In this research, we examined importance of plant cell wall function in the aspect of plant parasitic nematode infection mechanisms and of regulation of plant meristem. We have identified nematode attractant. Further, we have also found many nematode effector protein and plant factors responsible for nematode infection to plants. On the other hand, we have identified downstream of CLE peptides as a signaling molecule which regulate plant meristem activity. Further, CUC signaling pathway was also examined.

Report

(6 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (48 results)

All 2017 2016 2015 2014 2013 Other

All Int'l Joint Research (5 results) Journal Article (22 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 22 results,  Open Access: 6 results,  Acknowledgement Compliant: 6 results) Presentation (17 results) (of which Int'l Joint Research: 5 results,  Invited: 6 results) Book (3 results) Remarks (1 results)

  • [Int'l Joint Research] INRA(フランス)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] UNIVERSIDAD DE CASTILLA LA MANCHA(スペイン)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] Gent University(ベルギー)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] Cambridge University(英国)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] Oslo University(ノルウェー)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Chloroplastic ATP synthase builds up proton motive force for preventing reactive oxygen species production in photosystemI.2017

    • Author(s)
      Takagi, D., Amako, K., Hashiguchi, M., Fukaki, H., Ishizaki, K., Goh T., Fukao, Y., Sano, R., Kurata, T., Demura, T., Sawa, S., and Miyake C.
    • Journal Title

      Plant J.

      Volume: In Press.

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Negative phototaxis in M. incognita2017

    • Author(s)
      Oota, M., Gotoh, E., Endo, M., Ishida, T., Matsushita, T., and Sawa, S.
    • Journal Title

      Nem. Res.

      Volume: In Press.

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Role of LOTR1 in nutrient transport through organization of spatial distribution of root endodermal barriers.2017

    • Author(s)
      Li, B., Kamiya, T., Kalmbach, L., Yamagami, M., Yamaguchi, K., Shigenobu S., Sawa, S., Danku, J., Salt, D., Geldner, N., and Fujiwara, T.
    • Journal Title

      Curr. Biol.

      Volume: 27 Pages: 758-765

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CLE peptides and their signaling pathways in plant development.2016

    • Author(s)
      Yamaguchi, Y., Ishida, T.,Sawa, S.
    • Journal Title

      J. Exp. Bot.

      Volume: 67 Issue: 16 Pages: 4813-4826

    • DOI

      10.1093/jxb/erw208

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Polyamine resistance is increased by mutations in a nitrate transporter gene NRT1.3 (AtNPF6.4) in Arabidopsis thaliana.2016

    • Author(s)
      Tong W, Imai A, Tabata R, Shigenobu S, Yamaguchi K, Yamada M, Hasebe M, Sawa S, Motose H, Takahashi T
    • Journal Title

      Front. Plant Sci.

      Volume: 7-834 Pages: 834-834

    • DOI

      10.3389/fpls.2016.00834

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] The Naming of Names: Guidelines for Gene Nomenclature in Marchantia2016

    • Author(s)
      Bowman, J., Araki, T., Arteaga-Vazquez, M., Berger, F., Dolan, L., Haseloff, J., Ishizaki, K., Kyozuka, J., Lin, S.S., Nagasaki, H., Nakagami, H., Nakajima, K., Nakamura, Y., Ohashi-Ito, K., Sawa, S., Shimamura, M., Solano, R., Tsukaya, H., Ueda, T., Watanabe, Y., Yamato, K.T., Zachgo, S., and Kohchi, T.
    • Journal Title

      Plnat cell Physiology

      Volume: 57 Issue: 2 Pages: 257-261

    • DOI

      10.1093/pcp/pcv193

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Three-dimensional imaging of plant organs using a simple and rapid transparency technique.2016

    • Author(s)
      Hasegawa J, Sakamoto Y, Nakagami S, Aida M, Sawa S, Matsunaga S
    • Journal Title

      Plant Cell Physiol

      Volume: 57 Issue: 3 Pages: 462-472

    • DOI

      10.1093/pcp/pcw027

    • NAID

      120005756556

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chemotaxis assay of plant-parasitic nematodes on a gel-filled microchannel device2015

    • Author(s)
      Hida, H., Nishiyama, H., Sawa, S., Higashiyama, T., Arata, H.
    • Journal Title

      Sensors and Actuators

      Volume: B 221 Pages: 1483-1491

    • DOI

      10.1016/j.snb.2015.07.081

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] BAM 1 and RECEPTOR-LIKE PROTEIN KINASE 2 constitute a signaling pathway and modulate CLE peptide-triggered growth inhibition in Arabidopsis root.2015

    • Author(s)
      Shimizu N, Ishida T, Yamada M, Shigenobu S, Tabata R, Kinoshita A, Yamaguchi K, Hasebe M, Mitsumasu K, Sawa S,
    • Journal Title

      New phytologist

      Volume: 208 Issue: 4 Pages: 1104-1113

    • DOI

      10.1111/nph.13520

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 2.Plant peptide hormone signaling.2015

    • Author(s)
      Motomitsu A, Sawa S, Ishida T
    • Journal Title

      Essays in Biochemistry

      Volume: 58 Pages: 115-131

    • DOI

      10.1042/bse0580115

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular mechanisms of parasitism of plant-parasitic nematodes at apoplast.2015

    • Author(s)
      Mitsumasu, K., Nishiyama, H., Nakagami, S., Kanemaru, Y. and Sawa, S
    • Journal Title

      Jap. J. Pesticide Sci

      Volume: 40 Pages: 44-51

    • NAID

      130005096498

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mystery in genetics: PUB4 gives a clue to the complex mechanism of CLV signaling pathway in the shoot apical meristem2015

    • Author(s)
      Kinoshita, A., Seo, M., Kamiya, Y., and Sawa, S.
    • Journal Title

      Plant Signaling & Behavior

      Volume: 10:6 Issue: 6 Pages: e1028707-e1028707

    • DOI

      10.1080/15592324.2015.1028707

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Protocol for root-knot nematode culture by a hydroponic system and nematode inoculation to <i>Arabidopsi</i><i>s </i>2015

    • Author(s)
      Nishiyama, H., Ngan, B. T., Nagakami, S., Ejima, C., Ishida, T., and Sawa, S.
    • Journal Title

      Nematological Research (Japanese Journal of Nematology)

      Volume: 45 Issue: 1 Pages: 45-49

    • DOI

      10.3725/jjn.45.45

    • NAID

      130005118607

    • ISSN
      0919-6765, 1882-3408
    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] A plant U-box protein, PUB4, regulates asymmetric cell division and cell proliferation in the root meristem.2015

    • Author(s)
      Kinoshita, A, Hove, C.A., Tabata, R., Yamada, M., Shimizu, N., Ishida, T., Yamaguchi K., Shigenobu, S., Takebayashi, Y., Iuchi, S., Kobayashi, M., Kurata, T., Wada, T., Seo, M., Hasebe, M., Bilou, I., Fukuda, H., Scheres, B., Heidstra, R., Sawa, S.
    • Journal Title

      Development

      Volume: 142 Issue: 3 Pages: 444-453

    • DOI

      10.1242/dev.113167

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Maturation processes and structures of secreted peptides in plants.2014

    • Author(s)
      Tabata, R. Sawa, S.
    • Journal Title

      Front.Plant. Sci.

      Volume: 5 Pages: 1-6

    • DOI

      10.3389/fpls.2014.00311

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Light-dependent green gall formation induced by Meloidogyne incognita.2014

    • Author(s)
      Nishiyama, H., Nakagami, S., Todaka, A., Arita, T., Ishida, T., Sawa, S.
    • Journal Title

      Nematology

      Volume: 16 Issue: 8 Pages: 889-893

    • DOI

      10.1163/15685411-00002814

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Heterotrimeric G proteins control stem cell proliferation through CLAVATA signaling in Arabidopsis.2014

    • Author(s)
      Ishida, T., Tabata, R., Yamada, M., Aida, M., Mitsumasu, K., Fujiwara, M., Yamaguchi, K., Shigenobu, S., Higuchi, M., Tsuji, H., Shimamoto, K., Hasebe, M., Fukuda, H., Sawa, S.
    • Journal Title

      EMBO rep.

      Volume: 15 Issue: 11 Pages: 1202-1209

    • DOI

      10.15252/embr.201438660

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CLE19 peptide activity is regulated by SUPPRESSOR OF LLP1 1-mediated C-terminal processing in endosomes in Arabidopsis.2013

    • Author(s)
      Tamaki, T., Betsuyaku, S., Hamasaki, R., Fujiwara, M., Fukao, Y., Fukuda, H., and Sawa, S.
    • Journal Title

      Plant J.

      Volume: 6 Pages: 970-981

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The function of CLE and other plant peptide hormones in root development2013

    • Author(s)
      Yamada, M., and Sawa, S.
    • Journal Title

      Curr. Opin. Plant Biol.

      Volume: 16 Pages: 1-6

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Evolutionarily conserved CLE peptide signaling in plant development, symbiosis, and parasitism.2013

    • Author(s)
      Miyawaki, K.,et al.
    • Journal Title

      Curr. Opin. Plant Biol.

      Volume: 16 Issue: 5 Pages: 598-606

    • DOI

      10.1016/j.pbi.2013.08.008

    • Related Report
      2013 Annual Research Report 2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] CLAVATA3-like genes are differentially expressed in Grape Vine (Vitis vinifera) tissues2013

    • Author(s)
      R. Tominaga-Wada, Y. Nukumizu, T. Wada, T. Sawa, T. Tetsumura
    • Journal Title

      J. Plant Physiol.

      Volume: 170 Issue: 15 Pages: 1379-1383

    • DOI

      10.1016/j.jplph.2013.04.013

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] SUPPRESSOR OF LLP1 1-mediated C-terminal processing is critical for CLE19 peptide activity.2013

    • Author(s)
      Takayuki Tamaki
    • Journal Title

      The Plant Journal

      Volume: 76 Issue: 6 Pages: 970-981

    • DOI

      10.1111/tpj.12349

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Presentation] 植物感染性線虫の誘引物質の探索2017

    • Author(s)
      澤進一郎
    • Organizer
      日本農芸化学会2017年度大会
    • Place of Presentation
      京都女子大学
    • Year and Date
      2017-03-18
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 植物感染性線虫の感染過程における細胞壁成分の機能と役割2017

    • Author(s)
      大田守浩,Allen Yi-Lun Tsai,鈴木れいら,島岡知恵,石田喬志,澤進一郎
    • Organizer
      第58回植物生理学会年会
    • Place of Presentation
      鹿児島大学
    • Year and Date
      2017-03-16
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Molecular mechanisms of gall formation during nematode infection2016

    • Author(s)
      SAWA SHINICHIRO
    • Organizer
      International Symposium 'Front Lines of Plant Cell Wall Research and Beyond'
    • Place of Presentation
      熱海
    • Year and Date
      2016-10-04
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] EFC7 and EFC15 of Meloidogyne incognita are responsible for infection steps in Alabidopsis2016

    • Author(s)
      SAWA SHINICHIRO
    • Organizer
      32nd Symposium European Society of Nematologists
    • Place of Presentation
      ポルト
    • Year and Date
      2016-08-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] SOL1 and other peptidases are responsible for CLE peptide processing mechanisms2016

    • Author(s)
      SAWA SHINICHIRO
    • Organizer
      22nd International Conference on Plant Growth Substances
    • Place of Presentation
      トロント大学
    • Year and Date
      2016-06-19
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Analysis of Arabidopsis attractant of plant parasitic nematode, M. incognita.2016

    • Author(s)
      Shinichiro Sawa
    • Organizer
      第57回日本植物生理学会
    • Place of Presentation
      岩手大学上田キャンパス
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] “TOMEI”, a simple and quick clearing method for plant tissues2015

    • Author(s)
      Satoru Nakagami 3, Yuki Katsuyama 2, Shinichiro Sawa 3, Sachihiro Matsunaga
    • Organizer
      International ERATO Higashiyama Live-Holonics Symposium and Technical Workshop 2015
    • Place of Presentation
      名古屋大学野依記念学術交流館
    • Year and Date
      2015-08-27
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Analysis of plant attracta nt of plant parasitic nematode, M. incognita2015

    • Author(s)
      Shinichiro Sawa,Satoru Nakagami, Hidetaka Nishiyama, Yumi Kanemaru, Ayane Motomitsu
    • Organizer
      Front Lines of Plant Cell Wall Research
    • Place of Presentation
      東大寺総合文化センター
    • Year and Date
      2015-03-20 – 2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular dissection of CLE signaling pathway in Arabidopsis2015

    • Author(s)
      Shinichiro Sawa
    • Organizer
      Cambridge University
    • Place of Presentation
      Cambridge University
    • Year and Date
      2015-03-02
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular dissection of the CLE signaling pathway on the infection steps of the M. incognita.2014

    • Author(s)
      Shinichrio Sawa, Ayane motomitsu, Hidetaka Nishiyama, Tomomi Sagara, Yumi Kanemaru, Satoru Nakagami, and Takashi Ishida
    • Organizer
      日韓合同線虫学シンポジウム
    • Place of Presentation
      文部科学省研究交流センター
    • Year and Date
      2014-09-18 – 2014-09-19
    • Related Report
      2014 Annual Research Report
  • [Presentation] Comprehensive genetic analysis of CLV3 downstream pathway in Arabidopsis.2014

    • Author(s)
      Shinichiro Sawa
    • Organizer
      第47回日本発生生物学会
    • Place of Presentation
      WINC AICHI
    • Year and Date
      2014-05-27 – 2014-05-30
    • Related Report
      2014 Annual Research Report
  • [Presentation] 植物感染性線虫の感染分子機構の解析2014

    • Author(s)
      澤進一郎、光増可奈子
    • Organizer
      日本農薬学会
    • Place of Presentation
      京都大学
    • Related Report
      2012 Annual Research Report
  • [Presentation] Comprehensive genetic analysis of CLV3 downstream pathway in Arabidopsis2013

    • Author(s)
      Shinichiro Sawa
    • Organizer
      INTERNATIONAL KICK-OFF SYMPOSIUM FOR ISMCBC
    • Place of Presentation
      Kusunoki Reception Room, Kumamoto University
    • Year and Date
      2013-12-02
    • Related Report
      2013 Annual Research Report
  • [Presentation] Participation of the cell wall interface in intercellular signaling in plants2013

    • Author(s)
      Shinichiro Sawa
    • Organizer
      nternational Cell Wall Integrity Symposium
    • Place of Presentation
      KKR Kamakura Wakamiya
    • Year and Date
      2013-10-31
    • Related Report
      2013 Annual Research Report
  • [Presentation] Carboxypeptidase in CLE peptide maturation step,and CLE signaling molecules in Arabidopsis2013

    • Author(s)
      Shinichiro Sawa
    • Organizer
      21ST Conference of the International Plant Growth Substances Association
    • Place of Presentation
      The Shanghai International Conference Center(China)
    • Related Report
      2012 Annual Research Report
  • [Presentation] シロイヌナズナの幹細胞活性を規定するCLV3ペプチドホルモンシグナル伝達因子の順遺伝学による網羅的探索2013

    • Author(s)
      澤進一郎,志水法子,江島千佳,西山英孝,石田喬志
    • Organizer
      日本生化学大会
    • Place of Presentation
      パシフィコ横浜
    • Related Report
      2012 Annual Research Report
  • [Presentation] Participation of the cell wall interface in intercellular signaling in plants2013

    • Author(s)
      Shinichiro Sawa
    • Organizer
      International Cell Wall Integrity Symposium
    • Place of Presentation
      KKR Kamakura Wakamiya
    • Related Report
      2012 Annual Research Report
  • [Book] 植物ゲノム解析、次世代シーケンサー活用術2016

    • Author(s)
      重信秀治、澤進一郎、栗原志、持田恵一、上原(山口)由紀子、高木宏樹、阿部陽、寺内良平、関原明、高橋聡史
    • Publisher
      化学同人
    • Related Report
      2015 Annual Research Report
  • [Book] 細胞外空間(細胞壁)に注目した植物寄生性線虫の感染分子機構2016

    • Author(s)
      光増可奈子,西山英孝,中上知,金丸由実,澤進一郎
    • Publisher
      日本農薬学会誌
    • Related Report
      2015 Annual Research Report
  • [Book] Analysis of attractant of plant parasitic nematode2016

    • Author(s)
      Sawa, S
    • Publisher
      Soy Protein Research
    • Related Report
      2015 Annual Research Report
  • [Remarks] 澤研究室ホームページ

    • URL

      http://www.sci.kumamoto-u.ac.jp/~sawa/

    • Related Report
      2012 Annual Research Report

URL: 

Published: 2012-11-27   Modified: 2022-02-22  

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