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Understanding the virus-host network by post genome analysis

Planned Research

Project AreaMolecular basis of host cell competency in virus infection
Project/Area Number 24115007
Research Category

Grant-in-Aid for Scientific Research on Innovative Areas (Research in a proposed research area)

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionNational Institute of Advanced Industrial Science and Technology

Principal Investigator

Natsume Tohru  国立研究開発法人産業技術総合研究所, 創薬分子プロファイリング研究センター, 研究センター長 (00357683)

Co-Investigator(Kenkyū-buntansha) 伊庭 英夫  東京大学, 医科学研究所, 教授 (60111449)
Co-Investigator(Renkei-kenkyūsha) INADA Ken_ichi  藤田保健衛生大学, 医学部, 教授 (70246081)
HIROKAWA Takatsugu  産業技術総合研究所, 創薬分子プロファイリング研究センター, 研究チーム長 (20357867)
Project Period (FY) 2012-06-28 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥138,450,000 (Direct Cost: ¥106,500,000、Indirect Cost: ¥31,950,000)
Fiscal Year 2016: ¥28,080,000 (Direct Cost: ¥21,600,000、Indirect Cost: ¥6,480,000)
Fiscal Year 2015: ¥28,080,000 (Direct Cost: ¥21,600,000、Indirect Cost: ¥6,480,000)
Fiscal Year 2014: ¥29,120,000 (Direct Cost: ¥22,400,000、Indirect Cost: ¥6,720,000)
Fiscal Year 2013: ¥28,990,000 (Direct Cost: ¥22,300,000、Indirect Cost: ¥6,690,000)
Fiscal Year 2012: ¥24,180,000 (Direct Cost: ¥18,600,000、Indirect Cost: ¥5,580,000)
Keywords宿主細胞コンピテンシー / インフルエンザウイルス / HSV-1ウイルス / 質量分析 / miRNA / TNF-α / 新生タンパク質 / ウイルス複製 / ゴルジ装置 / 遺伝子抑制ネットワーク / ゲノム / プロテオミクス / 遺伝子制御ネットワーク / HSV-1 / LC-MS/MS / NS1 / ネットワーク解析 / 定量プロテオミクス / SWI/SNF複合体 / LC-MS/MS、 / LC-MSMS / YBX1 / miR-199a
Outline of Final Research Achievements

Virus infection is based on a balance between virus-host battle. To prevent virus infection, it is very important to understand its molecular mechanism. As an example of a virus-host battle, we analyzed the influenza virus mediated inhibitory mechanism of TNF-α-mediated immune response and the mechanism of miRNA (miR-199a-3p / -5p) mdeiated inhibition of HSV-1 virus replication. We succeeded in elucidating the molecular mechanism of each battles and clarifying a part of the survival strategy of virus and host. In addition, we have succeeded in identifying novel HSV-1 viral proteins related to neurotoxicity exhibited by HSV-1 virus by proteomic analysis.

Report

(6 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • 2013 Annual Research Report
  • 2012 Annual Research Report
  • Research Products

    (82 results)

All 2017 2016 2015 2014 2013 2012 Other

All Journal Article (47 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 45 results,  Open Access: 27 results,  Acknowledgement Compliant: 7 results) Presentation (34 results) (of which Invited: 6 results) Remarks (1 results)

  • [Journal Article] The role of the SWI/SNF chromatin remodeling complex in maintaining the stemness of glioma initiating cells2017

    • Author(s)
      Hiroaki Hiramatsu, Kazuyuki Kobayashi, Kyousuke Kobayashi, Takeshi Hraguchi, Yasushi Ino, Tomoki Toda & Hideo Iba
    • Journal Title

      Sienctific Reports

      Volume: 7 Issue: 1 Pages: 889-889

    • DOI

      10.1038/s41598-017-00982-3

    • URL

      https://pure.teikyo.jp/en/publications/547dc474-7387-4760-bfa2-12548a02caa3

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Robotic crowd biology with Maholo LabDroids.2017

    • Author(s)
      Yachie N; Robotic Biology Consortium (inc. Masaki Matsumoto)., Natsume T.
    • Journal Title

      Nature Biotechnology

      Volume: 35 Issue: 4 Pages: 310-312

    • DOI

      10.1038/nbt.3758

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A large-scale targeted proteomics assay resource based on an in vitro human proteome.2017

    • Author(s)
      Matsumoto M, Matsuzaki F, Oshikawa K, Goshima N, Mori M, Kawamura Y, Ogawa K, Fukuda E, Nakatsumi H, Natsume T, Fukui K, Horimoto K, Nagashima T, Funayama R, Nakayama K, Nakayama KI.
    • Journal Title

      Nat Methods

      Volume: 14 Issue: 3 Pages: 251-258

    • DOI

      10.1038/nmeth.4116

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] USP15 attenuates IGF-I signaling by antagonizing Nedd4-induced IRS-2 ubiquitination.2017

    • Author(s)
      Fukushima T, Yoshihara H, Furuta H, Hakuno F, Iemura SI, Natsume T, Nakatsu Y, Kamata H, Asano T, Komada M, Takahashi SI.
    • Journal Title

      Biochemical and Biophysical Research Communications

      Volume: 484 Issue: 3 Pages: 522-528

    • DOI

      10.1016/j.bbrc.2017.01.101

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] TMED10 Protein Interferes with Transforming Growth Factor (TGF)-β Signaling by Disrupting TGF-β Receptor Complex Formation.2017

    • Author(s)
      Nakano N, Tsuchiya Y, Kako K, Umezaki K, Sano K, Ikeno S, Otsuka E, Shigeta M, Nakagawa A, Sakata N, Itoh F, Nakano Y, Iemura SI, van Dinther M, Natsume T, Ten Dijke P, Itoh S.
    • Journal Title

      J Biol Chem

      Volume: 292(10) Issue: 10 Pages: 4099-4112

    • DOI

      10.1074/jbc.m116.769109

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Functional profiling of asymmetrically-organized human CCT/TRiC chaperonin.2016

    • Author(s)
      Araki K, Suenaga A, Kusano H, Tanaka R, Hatta T, Natsume T, Fukui K.
    • Journal Title

      Biochem Biophys Res Commun.

      Volume: 481(3-4) Issue: 3-4 Pages: 232-238

    • DOI

      10.1016/j.bbrc.2016.10.120

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Redox Sensitivities of Global Cellular Cysteine Residues under Reductive and Oxidative Stress.2016

    • Author(s)
      Araki K, Kusano H, Sasaki N, Tanaka R, Hatta T, Fukui K, Natsume T.
    • Journal Title

      J Proteome Res.

      Volume: 15(8) Issue: 8 Pages: 2548-59

    • DOI

      10.1021/acs.jproteome.6b00087

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] WDR26 is a new partner of Axin1 in the canonical Wnt signaling pathway.2016

    • Author(s)
      Goto T, Matsuzawa J, Iemura SI, Natsume T, Shibuya H.
    • Journal Title

      FEBS Lett

      Volume: 590(9) Issue: 9 Pages: 1291-1303

    • DOI

      10.1002/1873-3468.12180

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Directed Evolution of a Cyclized Peptoid-Peptide Chimera against a Cell-Free Expressed Protein and Proteomic Profiling of the Interacting Proteins to Create a Protein-Protein Interaction Inhibitor2016

    • Author(s)
      Takashi Kawakami, Koji Ogawa, Tomohisa Hatta, Naoki Goshima, and Tohru Natsume
    • Journal Title

      ACS Chemical Biology

      Volume: 11 Issue: 6 Pages: 1569-77

    • DOI

      10.1021/acschembio.5b01014

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] The C-terminal cytoplasmic tail of hedgehog receptor Patched1 is a platform for E3 ubiquitin ligase complexes.2016

    • Author(s)
      Yamaki, Y., Kagawa, H., Hatta, T., Natsume, T., and Kawahara, H.
    • Journal Title

      Mol. Cell. Biochem.

      Volume: 414 Issue: 1-2 Pages: 1-12

    • DOI

      10.1007/s11010-015-2643-4

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Dynamics and plasticity of the epithelial to mesenchymal transition induced by miR-200 family inhibition2016

    • Author(s)
      Haraguchi, T, Kondo, M, Uchikawa, R, Kobayashi, K, Hiramatsu, H, Kobayashi, K , Chit, UW, Shimizu, T, Iba, H.
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 1-12

    • DOI

      10.1038/srep21117

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Chaperone complex BAG2-HSC70 regulates localization of Caenorhabditis elegans leucine-rich repeat kinase LRK-1 to the Golgi2016

    • Author(s)
      Fukuzono T, Pastuhov SI, Fukushima O1, Li C, Hattori A, Iemura SI, Natsume T, Shibuya H, Hanafusa H, Matsumoto K, Hisamoto N.
    • Journal Title

      Genes Cells.

      Volume: 21(4) Issue: 4 Pages: 311-24

    • DOI

      10.1111/gtc.12338

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The miR-199a/Brm/EGR1 axis is a determinant of anchorage-independent growth in epithelial tumor cell lines.2015

    • Author(s)
      Kobayashi, K., Sakurai, K., Hiramatsu, H., Inada, K., Shiogama, K., Nakamura, S.,  Suemasa, F., Kobayashi, K., Imoto, S., Haraguchi, T., Ito, H., Ishizaka, A., Tsutsumi, Y., & Iba H.
    • Journal Title

      Scientific Reports,

      Volume: 5:8428 Issue: 1 Pages: 8428-8428

    • DOI

      10.1038/srep08428

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Post-transcriptional Stabilization of Ucp1 mRNA Protects Mice from Diet-Induced Obesity.2015

    • Author(s)
      Takahashi A, Adachi S, Morita M, Tokumasu M, Natsume T, Suzuki T, Yamamoto T.
    • Journal Title

      Cell Rep

      Volume: 13(12) Issue: 12 Pages: 2756-67

    • DOI

      10.1016/j.celrep.2015.11.056

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The subcellular localization and activity of cortactin is regulated by acetylation and interaction with Keap12015

    • Author(s)
      Ito A, Shimazu T, Maeda S, Shah AA, Tsunoda T, Iemura S, Natsume T, Suzuki T, Motohashi H, Yamamoto M, Yoshida M.
    • Journal Title

      Science Signaling.

      Volume: 8 Issue: 404 Pages: 404-404

    • DOI

      10.1126/scisignal.aad0667

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Preemptive quality control protects the ER from protein overload via the proximity of ERAD components and SRP.2015

    • Author(s)
      Kadowaki H, Nagai A, Maruyama T, Takami Y, Satrimafitrah P, Kato H, Honda A, Hatta T, Natsume T, Sato T, Kai H, Ichijo H, Nishitoh H
    • Journal Title

      Cell reports

      Volume: 13 Issue: 5 Pages: 944-956

    • DOI

      10.1016/j.celrep.2015.09.047

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] CNOT3 suppression promotes necroptosis by stabilizing mRNAs for cell death-inducing proteins.2015

    • Author(s)
      Suzuki T, Kikuguchi C, Sharma S, Sasaki T, Tokumasu M, Adachi S, Natsume T, Kanegae Y, Yamamoto T
    • Journal Title

      Sci Rep

      Volume: 5 Issue: 1

    • DOI

      10.1038/srep14779

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] CNOT3 contributes to early B cell development by controlling Igh rearrangement and p53 mRNA stability.2015

    • Author(s)
      Takeshi Inoue, Masahiro Morita, Atsushi Hijikata, Yoko Fukuda-Yuzawa, Shungo Adachi, Kyoichi Isono, Tomokatsu Ikawa, Hiroshi Kawamoto, Haruhiko Koseki, Tohru Natsume, Taro Fukao, Osamu Ohara, Tadashi Yamamoto, Tomohiro Kurosaki
    • Journal Title

      Journal of Experimental Medicine

      Volume: 212 Issue: 9 Pages: 1465-1479

    • DOI

      10.1084/jem.20150384

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] TBL2 Associates With ATF4 mRNA Via Its WD40 Domain and Regulates Its Translation During ER Stress.2015

    • Author(s)
      Tsukumo Y, Tsukahara S, Furuno A, Iemura SI, Natsume T, Tomida A
    • Journal Title

      Journal of Cellular Biochemistry

      Volume: 117(2): Issue: 2 Pages: 500-9

    • DOI

      10.1002/jcb.25301

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] CACUL1/CAC1 Regulates the Antioxidant Response by Stabilizing Nrf2.2015

    • Author(s)
      Kigoshi Y, Fukuda T, Endo T, Hayasaka N, Iemura S, Natsume T, Tsuruta F, Chiba T
    • Journal Title

      SCIENTIFIC REPORTS

      Volume: 5 Issue: 1

    • DOI

      10.1038/srep12857

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] The endoplasmic reticulum-localized protein TBL2 interacts with the 60S ribosomal subunit.2015

    • Author(s)
      Tsukumo Y, Tsukahara S, Furuno A, Iemura S, Natsume T, Tomida A
    • Journal Title

      Biochem Biophys Res Commun

      Volume: 10;462(4) Issue: 4 Pages: 383-388

    • DOI

      10.1016/j.bbrc.2015.04.144

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Nedd4-induced mono-ubiquitination of IRS-2 enhances IGF signaling and mitogenic activity.2015

    • Author(s)
      Toshiaki Fukushima, Hidehito Yoshihara, Haruka Furuta, Fumihiko Hakuno, Jing Luan, Cunming Duan, Yasushi Saeki, Keiji Tanaka, Shun-Ichiro Iemura, TohruNatsume, Kazuhiro Chida, Yusuke Nakatsu, Hideaki Kamata, Tomoichiro Asano, and Shin-Ichiro Takahashi
    • Journal Title

      Nature communications

      Volume: 6 Issue: 1 Pages: 6780-6780

    • DOI

      10.1038/ncomms7780

    • NAID

      120006348510

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Artificial human Met agonists based on macrocycle scaffolds2015

    • Author(s)
      Ito K, Sakai K, Suzuki Y, Ozawa N, Hatta T, Natsume T, Matsumoto K, Suga H.
    • Journal Title

      Nature Communications

      Volume: 6 Issue: 1 Pages: 6373-6373

    • DOI

      10.1038/ncomms7373

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Purification of noncoding RNA and bound proteins using FLAG peptide-conjugated antisense-oligonucleotides.2015

    • Author(s)
      Adachi S, Natsume T
    • Journal Title

      Methods Mol Biol

      Volume: 1262 Pages: 265-274

    • DOI

      10.1007/978-1-4939-2253-6_16

    • ISBN
      9781493922529, 9781493922536
    • Related Report
      2014 Annual Research Report
  • [Journal Article] 7SK small nuclear ribonucleoprotein complex is recruited to the HIV-1 promoter via short viral transcripts.2014

    • Author(s)
      Mizutani, T., Ishizaka, A., Suzuki, Y., and Iba, H.
    • Journal Title

      FEBS Letters,

      Volume: 588: Issue: 9 Pages: 1630-1636

    • DOI

      10.1016/j.febslet.2014.01.067

    • Related Report
      2014 Annual Research Report 2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Docosahexaenoic acid reverses angiotensin II-induced RECK suppression and cardiac fibroblast migration2014

    • Author(s)
      Siddesha JM, Valente AJ, Yoshida T, Sakamuri SS, Delafontaine P, Iba H, Noda M, Chandrasekar B
    • Journal Title

      Cell Signal

      Volume: 26 Issue: 5 Pages: 933-941

    • DOI

      10.1016/j.cellsig.2014.01.005

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] TBL2 is a novelPERK-binding protein that modulates stress-signaling and cell survival during endoplasmic reticulum stress.2014

    • Author(s)
      Tsukumo Y, Tsukahara S, Furuno A, Iemura S, Natsume T, Tomida A
    • Journal Title

      PLOS ONE

      Volume: 13:9(11) Issue: 11 Pages: e112761-e112761

    • DOI

      10.1371/journal.pone.0112761

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ZFP36L1 and ZFP36L2 control LDLR mRNA stability via the ERK-RSK pathway2014

    • Author(s)
      Adachi S, Homoto M, Tanaka R, Hioki Y, Murakami H, Suga H, Matsumoto M, Nakayama KI, Hatta T, Iemura S, Natsume T.
    • Journal Title

      Nucleic Acids Research

      Volume: 42 Issue: 15 Pages: 10037-10049

    • DOI

      10.1093/nar/gku652

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Structure-activity relationship study, target identification, and pharmacological characterization of a small molecular IL-12/23 inhibitor, APY0201.2014

    • Author(s)
      Hayakawa N, Noguchi M, Takeshita S, Eviryanti A, Seki Y, Nishio H, Yokoyama R, Noguchi M, Shuto M, Shima Y, Kuribayashi K, Kageyama S, Eda H, Suzuki M, Hatta T, Iemura S, Natsume T, Tanabe I, Nakagawa R, Shiozaki M, Sakurai K, Shoji M, Andou A, Yamamoto T
    • Journal Title

      Bioorg Med Chem

      Volume: 22(11): Issue: 11 Pages: 3021-3029

    • DOI

      10.1016/j.bmc.2014.03.036

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The HOPS complex mediates autophagosome-lysosome fusion through interaction with syntaxin 17.2014

    • Author(s)
      Jiang P, Nishimura T, Sakamaki Y, Itakura E, Hatta T, Natsume T, Mizushima N
    • Journal Title

      Mol Biol Cell.

      Volume: 25(8) Issue: 8 Pages: 1327-37

    • DOI

      10.1091/mbc.e13-08-0447

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] IQGAP1 regulates nuclear localization of β-Catenin via importin-β5 in Wnt signaling.2013

    • Author(s)
      Goto. T, Sato, A., Adachi, S., Iemura, S., Natsume, T. and Shibuya, H.
    • Journal Title

      J. Biol. Chem.

      Volume: 288 Issue: 51 Pages: 36351-36360

    • DOI

      10.1074/jbc.m113.520528

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Mesdc2 plays a key role in cell-surface expression of Lrp4 and postsynaptic differentiation in myotubes.2013

    • Author(s)
      Hoshi T, Tezuka T, Yokoyama K, Iemura S-I, Natsume T, and Yamanashi Y
    • Journal Title

      FEBS Lett.

      Volume: 587 Issue: 23 Pages: 3749-3754

    • DOI

      10.1016/j.febslet.2013.10.001

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dynamic Regulation of Erolα and Peroxiredoxin 4 Localization in the Secretory Pathway2013

    • Author(s)
      Taichi Kakihana, Kazutaka Araki, Stefano Vavassori, Shun-ichiro Iemura, Margherita Cortini, Claudio Fagioli, Tohru Natsume, Roberto Sitia and Kazuhiro Nagata
    • Journal Title

      The Journal of Biological Chemistry

      Volume: 288 Issue: 41 Pages: 2958629594-2958629594

    • DOI

      10.1074/jbc.m113.467845

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ero1-alpha and PDIs constitute a hierarchical electron transfer network of endoplasmic reticulum oxidoreductases.2013

    • Author(s)
      Araki K, Iemura S, Kamiya Y, Ron D, Kato K, Natsume T, Nagata K
    • Journal Title

      J Cell Biol

      Volume: 202(6) Pages: 861-874

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The casein kinase 2-nrf1 axis controls the clearance of ubiquitinated proteins by regulating proteasome gene expression2013

    • Author(s)
      Tsuchiya Y. et al.
    • Journal Title

      Mol Cell Biol.

      Volume: 33 Issue: 17 Pages: 3461-3472

    • DOI

      10.1128/mcb.01271-12

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PLEIAD/SIMC1/C5orf25, a Novel Autolysis Regulator for a Skeletal-Muscle-Specific Calpain, CAPN3, Scaffolds a CAPN3 Substrate, CTBP12013

    • Author(s)
      Ono, Y., Iemura, SI., Novak, S. M., Doi, N., Kitamura, F., Natsume, T., Gregorio, C. C., Sorimachi H
    • Journal Title

      J. Mol. Biol

      Volume: (in press) Issue: 16 Pages: 2955-2972

    • DOI

      10.1016/j.jmb.2013.05.009

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] LARP1 specifically recognizes the 3' terminus of poly(A) mRNA.2013

    • Author(s)
      Aoki K, Adachi S, Homoto M, Kusano H, Koike K, Natsume T
    • Journal Title

      Febs Letters

      Volume: 587(14) Issue: 14 Pages: 2173-2178

    • DOI

      10.1016/j.febslet.2013.05.035

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] IQGAP1 functions as a modulator of Dishevelled nuclear localization in Wnt signaling2013

    • Author(s)
      Goto, T., Sato, A., Shimizu, M., Adachi, S., Satoh, K., Iemura, S., Natsume, T. and Shibuya, H
    • Journal Title

      PLoS One

      Volume: 8 Issue: 4 Pages: e60865-e60865

    • DOI

      10.1371/journal.pone.0060865

    • Related Report
      2013 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The kelch repeat protein KLHDC10 regulates oxidative stress-induced ASK1 activation by suppressing PP52012

    • Author(s)
      Yusuke Sekine, Ryo Hatanaka, Takeshi Watanabe. Naoki Sono, Shun-ichiro Iemura, Tohru Natsume, Erina Kuranaga, Masayuki Miura, Kohsuke Takeda, and Hidenori Ichijo
    • Journal Title

      Molecular Cell

      Volume: 48 Issue: 5 Pages: 1-13

    • DOI

      10.1016/j.molcel.2012.09.018

    • NAID

      120007150217

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] RPA assists HSF1 access to nucleosomal DNA by recruiting histone chaperone FACT.2012

    • Author(s)
      Fujimoto M, Takaki E, Takii R, Tan K, Prakasam R, Hayashida N, Iemura S, Natsume T, Nakai A.
    • Journal Title

      Molecular Cell

      Volume: 48 Issue: 2 Pages: 182-194

    • DOI

      10.1016/j.molcel.2012.07.026

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] U7 small nuclear ribonucleoprotein represses histone gene transcription in cell cycle-arrested cells.2012

    • Author(s)
      Ideue T.
    • Journal Title

      Proc Natl Acad Sci U S A

      Volume: 109(15) Issue: 15 Pages: 5693-5698

    • DOI

      10.1073/pnas.1200523109

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Identification and functional analysis of Zranb2 as a novel Smad-binding protein that suppresses BMP signaling2012

    • Author(s)
      Ohte S
    • Journal Title

      J Cell Biochem

      Volume: 113 Issue: 3 Pages: 808-814

    • DOI

      10.1002/jcb.23408

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] A potent 2'-O-methylated RNA-based microRNA inhibitor with unique secondary structures2012

    • Author(s)
      Haraguchi,T., Nakano, H., Tagawa, T., Ohki, T., Ueno, Y., Yoshida, T., Iba, H.
    • Journal Title

      Nucleic Acids Res.

      Volume: (in press) Issue: 8 Pages: 1-13

    • DOI

      10.1093/nar/gkr1317

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Double PHD finger proteins DPF3a and 3b are reouired as transcriptional coactivators in the SWI/SNF complex-dependent activation of the NF-κB Re1A/p50 heterodimer2012

    • Author(s)
      Ishizaka A, Mizutani T, Kobayashi K, Tando T, Sakurai K, Fujiwara T, Iba H
    • Journal Title

      The Journal of Biological Chemistry

      Volume: (印刷中) Issue: 15 Pages: 11924-11933

    • DOI

      10.1074/jbc.m111.322792

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Extracellular ATP mediates mast cell-dependent intestinal inflammation through P2X7 purinoceptors2012

    • Author(s)
      Y. Kurashima, T. Amiya, T. Nochi, K. Fujisawa, T. Haraguchi, H. Iba, H. Tsutsui, S. Sato, S. Nakajima, H. Iijima, M. Kubo, J. Kunisawa, H. Kiyono
    • Journal Title

      Nat Commun.

      Volume: 3-1034 Issue: 1 Pages: 1034-1034

    • DOI

      10.1038/ncomms2023

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Multiple microRNAs induced by Cdx1 suppress Cdx2 in human colorectal tumour cells2012

    • Author(s)
      Tagawa T
    • Journal Title

      Biochem J

      Volume: 447 Issue: 3 Pages: 449-455

    • DOI

      10.1042/bj20120434

    • Related Report
      2012 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 2’-OME RNAオリゴを基盤とした独特の二次構造を持つ新規microRNA阻害剤、S-TuD2012

    • Author(s)
      原口健、伊庭英夫
    • Journal Title

      遺伝子医学MOOK

      Volume: 23 Pages: 169-175

    • Related Report
      2012 Annual Research Report
  • [Presentation] SWI/SNF複合体とNF-κBを連結するアダプタータンパク質の機能阻害によるがんの抑制,2015

    • Author(s)
      中村 真也, 小林 和善, 平松 寛明, 小林 郷介, 伊庭 英夫:
    • Organizer
      第38回日本分子生物学会年会・第88回日本生化学会合同大会,(ポスター)
    • Place of Presentation
      神戸国際展示場(神戸)
    • Year and Date
      2015-12-03
    • Related Report
      2015 Annual Research Report
  • [Presentation] ドラッグ・リポジショニングのための分子プロファイリング2015

    • Author(s)
      夏目徹
    • Organizer
      BMB2015 (ワークショップ座長講演)
    • Place of Presentation
      神戸国際展示場(神戸)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] The role of SWI/SNF chromatin remodeling complex in maintenance of stemness in glioma stem cells (グリオーマ幹細胞の幹細胞性の維持におけるSWI/SNFクロマチン構造変換複合体の役割)2015

    • Author(s)
      平松寛明、小林和善、小林郷介、原口健、稲生靖、藤堂具紀、伊庭英夫
    • Organizer
      第38回日本分子生物学会年会(ポスター)
    • Place of Presentation
      神戸国際展示場(神戸)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] Host miRNAs behave like “invisible hands” that shape cellular specificity and guard its integrity. “Prof. Akio Nomoto Memorial Symposium”2015

    • Author(s)
      Iba, H., Kobayashi, K., and Haraguchi, T.
    • Organizer
      第63回日本ウイルス学会学術集会
    • Place of Presentation
      福岡国際会議場(福岡)
    • Year and Date
      2015-11-22
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Host miRNAs with anti-viral potential against multiple viruses2015

    • Author(s)
      Iba, H., Kobayashi, K., Kobayashi, K., and Haraguchi, T.
    • Organizer
      第13回都医学研国際シンポジウム
    • Place of Presentation
      東京都医学総合研究所(東京)
    • Year and Date
      2015-11-20
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Suppression of tumorigenicity of a triple-negative breast cancer cell line by simultaneous inhibition of two miRNAs (2種のmiRNA阻害による乳癌幹細胞の造腫瘍能の抑制)2015

    • Author(s)
      Haraguchi, T., Kondo, M., Iba, H.
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場(名古屋)
    • Year and Date
      2015-10-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] Suppression of adaptor proteins linking the SWI/SNF complex with NF-κB dimers efficiently suppresses cancer development. (SWI/SNFクロマチン構造変換因子とNF-κBを結ぶアダプター因子の抑制は抗腫瘍効果を示す)2015

    • Author(s)
      Kobayashi, K., Hiramatsu, H., Iba, H.
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場(名古屋)
    • Year and Date
      2015-10-09
    • Related Report
      2015 Annual Research Report
  • [Presentation] Dynamics of epithelial-mesenchymal transition induced by miR-200 family inhibition. (miR-200ファミリーの阻害で誘導される上皮間充織転換の動態解析)2015

    • Author(s)
      Iba, H., Kobayashi, K., Hiramatsu, H., Sakurai, K., Inada, K., Tsutsumi, Y., Haraguchi, T.
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋国際会議場(名古屋)
    • Year and Date
      2015-10-08
    • Related Report
      2015 Annual Research Report
  • [Presentation] インターオミックスー転写・翻訳・分解全てを俯瞰するハイスループット解析から展開する創薬・診断2015

    • Author(s)
      夏目徹
    • Organizer
      日本プロテオーム学会2015年会
    • Place of Presentation
      くまもと森都心プラザ(熊本)
    • Year and Date
      2015-07-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] 分子プロファイリングから展開する創薬加速,2015

    • Author(s)
      夏目徹
    • Organizer
      第362回CBI学会講演会
    • Place of Presentation
      東京大学山上会館(東京)
    • Year and Date
      2015-05-28
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] SWI/SNF複合体の触媒サブユニットBrmとmiR-199aが上皮がん細胞株において形成する遺伝子発現制御ネットワークとその生物学的機能。2014

    • Author(s)
      小林和善
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜.横浜市
    • Year and Date
      2014-11-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] Analysis on the molecular mechanisms of EMT using new TuD RNA expression lentivirus vectors regulating miR-200c expression. (ポスター)2014

    • Author(s)
      Kondo, M., Haraguchi, T. and Iba, H.
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜.横浜市
    • Year and Date
      2014-11-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] Analysis on EMT using Tetracycline-inducible microRNA inhibitory vectors against miR-200c.2014

    • Author(s)
      Haraguchi, T., Kondo, M. and Iba, H.
    • Organizer
      第73回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜.横浜市
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] The regulatory networks formed by Brm subunit of SWI/SNF and miR-199a and its biological function.2014

    • Author(s)
      Kobayashi, K., Sakurai, K., Hiramatsu, H., Haraguchi, T., Inada, K. and Iba, H.
    • Organizer
      第73回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜.横浜市
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] Robust gene regulatory networks that support anchorage-independent growth of human epithelial tumor cell lines.2014

    • Author(s)
      Iba, H., Kobayashi, K., Sakurai, K., Hiramatsu, H., and Haraguchi, T.
    • Organizer
      第73回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜.横浜市
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] :分子スイッチとしてのmiRNAとTuD RNA 発現ベクターによるその活性抑制 (招待講演)2014

    • Author(s)
      伊庭英夫、原口健
    • Organizer
      第6回日本RNAi研究会
    • Place of Presentation
      グランドプリンスホテル広島.広島市
    • Year and Date
      2014-08-29
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 創薬支援のためのプロテオミクス2014

    • Author(s)
      夏目 徹
    • Organizer
      日本プロテオーム学会2014年会
    • Place of Presentation
      つくば国際会議場筑波.つくば市
    • Year and Date
      2014-07-18
    • Related Report
      2014 Annual Research Report
  • [Presentation] 定量プロテオミクスから展開する分子プロファイリング2014

    • Author(s)
      夏目徹
    • Organizer
      日本薬学会第134年会特別講演
    • Place of Presentation
      熊本
    • Related Report
      2013 Annual Research Report
  • [Presentation] Pharmacoproteomics: Absolute quantification of protein interactions for drug target identification.2013

    • Author(s)
      夏目徹
    • Organizer
      KHUPO 13th Annual International Proteomics Conference
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2013-03-29
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] 分子プロファイリングから展開するDR2013

    • Author(s)
      夏目徹
    • Organizer
      CBI学会
    • Place of Presentation
      タワーホール船堀
    • Related Report
      2013 Annual Research Report
  • [Presentation] 定量プロテオミクスから展開する分子プロファイリング2013

    • Author(s)
      夏目徹
    • Organizer
      新アミノ酸分析研究会第3回学術講演会
    • Place of Presentation
      東京大学薬学部講堂
    • Related Report
      2013 Annual Research Report
  • [Presentation] ドラッグ・リプロファイリングから展開するドラッグ・リポジショニング2013

    • Author(s)
      夏目徹
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Annual Research Report
  • [Presentation] A crosstalk between HCV replication and host lipogenesis is mediated by miRNAs.2013

    • Author(s)
      Munakata,T., Haraguchi,T., Iba, H., and Kohara, M.
    • Organizer
      The 20th International Symposium on Hepatitis C Virus and Related Viruses
    • Place of Presentation
      Melbourne, Australia
    • Related Report
      2013 Annual Research Report
  • [Presentation] Comparative analysis of efficient expression vectors for miRNA inhibitory decoy “TuD RNA”2013

    • Author(s)
      Haraguchi, T., Hiramatsu, H, and Iba, H.
    • Organizer
      第72回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] Dependency of the SWI/SNF complex and d4 family proteins for the expression of NF-B target genes.2013

    • Author(s)
      Kobayashi, K., Hiramatsu, H., Haraguchi, T., Sakurai, K., Iba, H.
    • Organizer
      第72回日本癌学会学術総会
    • Place of Presentation
      横浜
    • Related Report
      2013 Annual Research Report
  • [Presentation] miRNA 阻害分子TuD RNAの標的特異性を制御した設計法とその応用2013

    • Author(s)
      平松寛明、原口健、小林郷介、近藤正幸、小林和善、原田兼司、吉田哲郎、伊庭英夫
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Related Report
      2013 Annual Research Report
  • [Presentation] ウイルス増殖を抑制するmicroRNA 「m iR-199a/-214クラスター」に関する研 究2013

    • Author(s)
      小林郷介
    • Organizer
      第61回日本ウイルス学会学術集会
    • Place of Presentation
      神戸国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] 7SK snRNP複合体によるHIV-1転写伸長阻害機 構の解析2013

    • Author(s)
      石坂彩、水谷壮利、鈴木穣、伊庭英夫
    • Organizer
      第61回日本ウイルス学会学術集会
    • Place of Presentation
      神戸国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] マイクロRNAによるC型肝炎ウイルス複製制御と宿主脂肪酸合成経路のクロストーク2013

    • Author(s)
      棟方翼、小原道法、原口健、伊庭英夫
    • Organizer
      第61回日本ウイルス学会学術集会
    • Place of Presentation
      神戸国際会議場
    • Related Report
      2013 Annual Research Report
  • [Presentation] エピジェネティカルスイッチとしてのmiRNAとその活性抑制法2013

    • Author(s)
      伊庭英夫
    • Organizer
      東京理科大学RNA科学総合研究センタ一公開シンポジウム
    • Place of Presentation
      東京、葛飾キャンパス
    • Related Report
      2013 Annual Research Report
  • [Presentation] 「マイクロRNAの新展開と創薬への利用。」2013

    • Author(s)
      伊庭英夫
    • Organizer
      ゲノム創薬フォーラム第32回談話 会
    • Place of Presentation
      東京
    • Related Report
      2013 Annual Research Report
  • [Presentation] Purmacoproteomics: Target ID and Target Discovery.2012

    • Author(s)
      夏目徹
    • Organizer
      ChemBioChem Symosium
    • Place of Presentation
      京都
    • Year and Date
      2012-10-31
    • Related Report
      2012 Annual Research Report
    • Invited
  • [Presentation] Molecular switches formed by miR-199a and Brm, a catalytic subunit of SWI/SNF chromatin remodeling factor,determine inflammation status in cancer cells.2012

    • Author(s)
      Iba, H.
    • Organizer
      Innate Immunity Society (IEIIS) meeting
    • Place of Presentation
      東京
    • Year and Date
      2012-10-25
    • Related Report
      2012 Annual Research Report
  • [Presentation] SWI/SNFcomplex catalytic subunit, Brm, as a key epigenetical regulatorin cancer cells.2012

    • Author(s)
      Iba, H. et al.
    • Organizer
      第71回日本癌学会学術総会
    • Place of Presentation
      札幌
    • Year and Date
      2012-09-19
    • Related Report
      2012 Annual Research Report
  • [Remarks] 東京大学・医科学研究所・宿主寄生体学分野

    • URL

      http://www.ims.u-tokyo.ac.jp/div-host-parasite/Version1.html

    • Related Report
      2012 Annual Research Report

URL: 

Published: 2012-11-27   Modified: 2019-07-29  

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