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Integrating data and simulation for dynamic structural biology

Planned Research

Project AreaGenerative design to unlock the potential of protein function
Project/Area Number 24H02260
Research Category

Grant-in-Aid for Transformative Research Areas (A)

Allocation TypeSingle-year Grants
Review Section Transformative Research Areas, Section (II)
Research InstitutionNagoya University

Principal Investigator

TAMA FLORENCE  名古屋大学, 理学研究科, 教授 (20648191)

Co-Investigator(Kenkyū-buntansha) 宮下 治  国立研究開発法人理化学研究所, 計算科学研究センター, 上級研究員 (10620528)
Project Period (FY) 2024-04-01 – 2029-03-31
Project Status Granted (Fiscal Year 2024)
Budget Amount *help
¥106,730,000 (Direct Cost: ¥82,100,000、Indirect Cost: ¥24,630,000)
Fiscal Year 2025: ¥20,150,000 (Direct Cost: ¥15,500,000、Indirect Cost: ¥4,650,000)
Fiscal Year 2024: ¥26,390,000 (Direct Cost: ¥20,300,000、Indirect Cost: ¥6,090,000)
Keywordsprotein dynamics / intrinsically disordered / integrative modeling / MD simulations
Outline of Research at the Start

Biomolecules are essential for cellular processes, and disruptions in their function can lead to severe diseases. Engineering biomolecules with specific functions offers tremendous promise for society. Because biomolecules are intrinsically flexible, experimental investigation to elucidate their function is challenging. We will work on the integration of experimental data with simulation, Data Integration Simulation, to provide approaches for elucidating biomolecular function and apply them to specific proteins, such as the Cryptochrome proteins involved in the circadian rhythm.

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Published: 2024-04-05   Modified: 2025-04-17  

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