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Studies on Active Site of Transaminase by Site-Directed Mutagenesis

Research Project

Project/Area Number 01480524
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 物質生物化学
Research InstitutionOsaka Medical College

Principal Investigator

KAGAMIYAMA Hiroyuki  Osaka Medical College, Medical School, Professor, 医学部, 教授 (80028555)

Project Period (FY) 1989 – 1991
Project Status Completed (Fiscal Year 1991)
Budget Amount *help
¥6,500,000 (Direct Cost: ¥6,500,000)
Fiscal Year 1991: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1990: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1989: ¥4,400,000 (Direct Cost: ¥4,400,000)
KeywordsMutagenesis / Transaminase / Aspartate Aminotransferase / Enzyme Mechanism / Pyridoxal Phosphate / Active Site / Protein Engineering / 部位特異性突然変異 / アスパラギン酸アミノ基転移酵素 / ピリドキサル燐酸 / 活性中心 / 酵素の活性中心 / 基質認識
Research Abstract

We have examined the functional role of some active site residues of E. coli aspartate aminotransferase by using kinetic analysis on mutant enzymes produced by the site-directed mutagenesis. Aspartate aminotransferase has been the most extensively studied representative of many transaminases ; X-ray analysis has been done. Our findings are as follows :
1. Lys258 is essential for catalysis, acting as a catalytic base to withdraw an a -proton from the amino acid substrate, which is a prerequisite for the catalysis.
2. A negative charge at position 222, and a hydrogen bond between the hydroxyl group of Tyr225 and the unprotonated hydroxyl group of the coenzyme probably help in lowering the electron density of the coenzyme to facilitate the a- proton removal.
3. Arg292 and Arg386 are essential for the recognition of the dicarboxylic substrates.
4. Substitution of Arg292 to uncharged residues greatly enhanced the catalytic efficiency of the transamination of neutral amino acid without. any effect on the binding.
5. The endole ring of Trpl4O not only regulates the rotational movement of the coenzyme ring during the catalysis, but it may be also involved in the binding of the carboxyl side chain of the dicarboxylic acid substrates.
6. The phenol group of Tyr7O is essential for the stabilization of the transition states with all substrates. The presence of the benzen ring at position 70 is necessary to recognize the glutanate-2-oxoglutarate substrate pair.

Report

(4 results)
  • 1991 Annual Research Report   Final Research Report Summary
  • 1990 Annual Research Report
  • 1989 Annual Research Report
  • Research Products

    (59 results)

All Other

All Publications (59 results)

  • [Publications] Nagashima,F.: "cDNA Cloning and Expression of Pig Cytosolic Aspartate Aminotransferase in Escherichia coli:Aminoterminal Heterogeneity of Expressed Products and Lack of Its Correlation with Enzyme Function." Biochemistry. 28. 1153-1160 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Tanizawa,K.: "The Primary Structure of Thermostable D-Amino Acid Aminotransferase from A Thermophilic Bacillus Species,and Its Correlation with L-Amino Acid Aminotransferase." J.Biol.Chem.264. 2450-2454 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Inoue,Y.: "Substitution of A Lysyl Residue for Arginine386 of Escherichia coli Aspartate Aminotransferase." J.Biol.Chem.9673-9681 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi,H.: "〔Arg292--Val〕or 〔Arg292--Leu〕 Mutation Enhances The Reactivity of Escherichia coli Aspartate Aminotransferase with Aromatic Amino Acids." Biochem.Biophys.REs.Commun.159. 337-342 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] kamitori,S.: "Crystallization and Preliminary X-Ray Characterization of Branched-Chain Amino acid Aminotransferase From Escherichia coli." J.Biochem.105. 671-672 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 倉光 成紀: "Siteーdirected mutagenesisによるタンパク質機能の解析" 臨床科学. 25. 249-259 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 林 秀行: "アミノ酸転移酵素研究の新展開(蛋白質化学から蛋白質工学へ)" 蛋白質 核酸 酵素. 34. 1893-1903 (1989)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi,H.: "Effect of Replacement of Tryptophan-140 by Phenylalanine or Glycine on The Function of Escherichia coli Aspartate Aminotransferase." Biochem.,Biophys.Rse.Commun.167. 407-412 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sung,M-H.: "Purification and Characterization of Thermostable Aspartate Aminotransferase From A Thermophilic Bacillus Species." J.Bacteriol.172. 1345-1351 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kuramitsu,S.: "Pre-Steady State Kinetics of Escherichia coli Aspartate Aminotransferase Catalyzed Reactions and Thermodynamic Aspects of Its Sustrate Specificty." Biochemistry. 29. 5469-5476 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Morino,Y.: "Mammalian Aspartate Aminotransferase Isozymes:From DNA to Protein." Annals of The New York Academy of Sciences. 585. 32-47 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kamitori,S.: "Three-Dimensional Structures of Aspartate Aminotransferase Form Escherichia coli and Its Mutant Enzyme at 2.5A Resolution." J.Biochem.108. 175-184 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 倉光 成紀: "アスパラギン酸トランスアミナ-ゼ" プロテインエンジニアリング(現代化学). 増刊19. 64-73 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sung,M-H.: "Thermostable Aspartate Aminotransferase From A Thermophilic Bacillus species:Gene Cloning,Sequence Determination,and preliminary X-Ray Characterization." J.Biol.Chem.266. 2567-2572 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Inoue,K.: "Tyr225 in Aspartate Aminotransferase:Contribution of The Hydrogen Bond Between Tyr225 and Coenzyme to The Catalytic Reaction." J.Biochem.109. 570-576 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi,H.: "Replacement of An Interdomain Residue Va139 Escherichia coli Aspartate aminotransferase Affects The Catalytic Copetence Without Altering the Substrate Specificity of The Enzyme." J.Biochem.109. 699-704 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Yano,T.: "The Rolr of His143 in The Catalytic Mechanism of Escherichia coli Aspartate Aminotransferase." J.Biol.Chem.266. 6079-6085 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Inoue,K.: "Site-Directed Mutagenesis of Escherichia coli Aspartate Aminotransferase:Role of Tyr70 in The Catalytic Process." Biochemistry. 30. 7796-7801 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sung,M-H.: "Molecular Cloning and Sequence Determination of Thermostable aspartate Aminotransferase From Thermophilic Bacillus Species." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui,T.et al.eds.). 55-57 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Okamota,A.: "Three-Dimensional Structure of Aspartate Aminotransferase Form Escherichia coli." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui,T.et al eds.). 107-109 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kuramitsu,S.: "Asp222,His143,and Tyr70 in Escherichia coli Aspartate Aminotransferase." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui,T.et al eds.). 179-181 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi,H.: "Escherichi coli Aspartate Aminotransferase:Effect of Site-Specific Mutations on Substrate Binding and Catalysis." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui,T.et al eds.). 183-186 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 倉光 成紀: "ピリドキサル酵素の蛋白工学" 蛋白工学シリ-ズ蛋白質立体構造の新しい視点(森川耿右編). 152-173 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Nagashima, F.: "cDNA Cloning and Expression of Pig Cytosolic Aspartate Amino-transferease in Escherichia coli : Aminoterminal Heterogeneity of Expressed Products and Lack of Its Correlation with Enzyme Function." Biochemistry. 28. 1153-1160 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Tanizawa, K.: "The Primary Structure of Thermostable D-Amino Acid Aminotransferase from A Thermophilic Bacillus Species, and Its Correlation with L-Amino Acid Aminotransferase." J. Biol. Chem.264. 2450-2454 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Inoue, Y.: "Substitution of A Lysyl Residue for Arginine386 of Escherichia coli Aspartate Aminotransferase." J. Biol. Chem.9673-9681 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi, H.: "[Arg292--Val] or [Arg292--Leu] Mutation Enhances The Reactivity of Escherichia coli Aspartate Aminotransferase with Aromatic Amino Acids." Biochem. Biophys. Res. Commun.159. 337-342 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kamitori, S.: "Crystallization and Preliminary X-Ray Characterization of Branched-Chain Amino acid Aminotransferase From Escherichia coli." J. Biochem.105. 671-672 (1989)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi, H.: "Effect of Replacement of Tryptophan-140 by Phenylalanine or Glycine on The Function of Escherichia coli Aspartate Aminotrans-ferase." Biochem., Biophys. Rse. Commun.167. 407-412 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sung, M-H.: "Purification and Characterization of Thermostable Aspartata Aminotransferase From A Thermophilec Bacillus Species." J. Bacteriol.172. 1345-1351 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kuramitsu, S.: "Pre-Steady State Kinetics of Escherichia coli Aspartate Amino-transferase Catalyzed Reactions and Thermodynamic aspects of Its Sustrate Specificty." Biochmeistry. 29. 5469-5476 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Morino, Y.: "Mammalian Aspartate Aminotransferase Isozymes : From DNA to Protein." Annals of The Nwe York Academy of Sciences. 585. 32-47 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kamitori, S.: "Three-Dimensional Structures of Aspartate Aminotransferase From Escherichia coli and Its Mutant Enzyme at 2.5A Resolution." J. Biochem.108. 175-184 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sung, M-H.: "Thermostable Aspartate Aminotransferase From A Thermophilic Bacillus Species : Gene Cloning, Sequence Determination, and Preliminary X-Ray Characterization." J. Biol. Chem.266. 2567-2572 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Inoue, K.: "Tyr225 in Aspartate Aminotransferase : Contribution of The Hydrogen Bond Between Tyr225 and Coenzyme to The Catalytic Reaction." J. Biochem.109. 570-576 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi, H.: "Replacement of An Interdomain Residue Va139 of Escherichia coli Aspartate aminotransferase Affects The Catalytic Competence With-out Altering the Substrate Specificity of The Enzyme." J. Biochem.109. 699-704 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Yano, T.: "The Rolr of His143 in The Catalytic Mechanism of Escherichia coli Aspartate Aminotransferase." J. Biol. Chem.266. 6079-6085 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Inoue, K.: "Site-Directed Mutagenesis of Escherichia coli Aspartate Aminotransferase : Role of Tyr70 in The Catalytic Process." Biochemistry. 30. 7796-7801 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sung, M-H.: "Molecular Cloning and Sequence Determination of Thermostable aspartate Aminotransferase From Thermophilic Bacillus Species." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui, T. et al. eds.). 55-57 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Okamota, A.: "Three-Dimensional Structure of Aspartate Aminotransferase From Escherichia coli." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui, T. et al. eds.). 107-109 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kuramitsu, S.: "Asp222, His143, and Tyr70 in Escherichia coli Aspartate Amino-transferase." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui, T. et al. eds.). 179-181 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Hayashi, H.: "Escherichi coli Aspartate Aminotransferase : Effect of Site-Specific Mutations on Substrate Binding and Catalysis." Enzymes Dependent on Pyridoxal Phosphate and Other Carbonyl Compounds as Cofactors.(Fukui, T. et al. eds.). 183-186 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Moon-Hee Sung: "Thermostable Aspartate Aminotransferase from a Thermophilic Bacillus Species:Gene Cloning,Sequence Determination,and Preliminary X-Ray Characterization" J.Biol.Chem.266. 2567-2572 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Katsura Inoue: "Tyrosine 225 in Aspartate Aminotransferase:Contribution of the Hydrogen Bond Between Tyr 225 and Coenzyme to the Catalytic Reaction" J.Biochem.109. 570-576 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Hideyuki Hayashi: "Replacement of an Interdomain Residue Vol39 of Escherichia coli Aspartate Aminotransferase Affects the Catalytic Competence without Altering the Substrate Specificity of the Enzyme" J.Biochem.109. 699-704 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Takato Yano: "The Role of His^<143> in the Catalytic Mechanism of Escherichia coli Aspartate Aminotransferase" J.Biol.Chem.266. 6079-6085 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Katsura Inoue: "Site-Directed Mutagenesis of Escherichia coli Aspartate Aminotransferase:Role of Tyr70 in the Cataly tic Process" Biochemistry. 30. 7796-7801 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] MoonーHee Sung: "Purification and Characterization of Thermostable Aspartate Aminotransferase from a Thermophilic Bacillus Species" J.Bacteriol.172. 1345-1351 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] Hideyuki Hayashi: "Effects of replacement of tryptophav 140 by phenylalauine or glycine on the function of Escherichia coli aspartate aminotransferase" Biochem.Biophys.Res.Commun.167. 407-412 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] Seiki Kuramitsu: "Preーsteady state kinetics of Escherichia coli aspartate aminotransferase catalyzed reactions and thermodynamic aspects of its substrate specificiry" Biochemistrg. 29. 5469-5476 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] Yoshimasa Morino: "Mammalian aspartote aminotrausferase isozywes:fron DNA to protein" Ann.New York Acad.Sci.585. 32-47 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] Shigehiro Kamifori: "Three dimensional structures of aspartate aminotrausferase from Escherichia coli and its mutaut euzymu at 2.5A^^゚ resolution" J.Biochem.108. 175-184 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] Katsura Inoue: "SiteーDirected Mutagenesis of Escherichia coli Aspartate Aminotransferase:Role of Tyr70 in the catalytic Proess" J.Biochem. (1991)

    • Related Report
      1990 Annual Research Report
  • [Publications] Hideyuki Hayashi: "〔Arg292→Val〕or〔Arg292→Leu〕Mutation Enhances The Reactivity of Escherichia coli Aspartate Aminotransferase with Aromatic Amoni Acids" Biochem.Biophys.Res.Commun.151. 337-342 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Shigehiko Kamitori: "Crystallization and Preliminary X-Ray Characterization of Branched-Chain Amino Acid Aminotransferase From Escherichia Coli" J.Biochem.105. 671-672 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Yasushi Inoue: "Substitution of A hysyl Residue For Arg386 of Escherichia coli Aspartate Aminotransferase" J.Biol.Chem.264. 9673-9681 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Fujio Nagashima: "cDNA Cloning and Expression of Pig Cytosolic Aspartade Aminotransferase in Escherichia coli:Amino Terminal Heterogeueity of Expressed Products And Lack of Its Correlatiun with Enzyme Function" Biochemistry. 28. 1153-1160 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Katsuyuki Tanizawa: "The Primary Structure of Thermostable D-Amino Acid Aminotransferase From a Thermophilic Bacillus Species,And Its Correlation with 1-Amino Acid Anminotransferarse" J.Biol.Chem.264. 2450-2454 (1989)

    • Related Report
      1989 Annual Research Report
  • [Publications] Seiki Kuramitsu: "Presteady State Kinetics of Escherichia coli Aspartate Aminotransferase-Catalyzed Reactions And Thermoslynamic Aspect of Its Substrate Specificity" Biochemistry. (1990)

    • Related Report
      1989 Annual Research Report

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Published: 1989-04-01   Modified: 2016-04-21  

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