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Study of Optical Approximation to Photoproduct Formation in Oligonucleotides by Action Spectra (50 - 300 nm).

Research Project

Project/Area Number 01580216
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 放射線5生物学
Research InstitutionRikkyo University.

Principal Investigator

HIEDA Kotaro  Rikkyo University, Collage of Science, Professor, 理学部, 教授 (20062656)

Project Period (FY) 1989 – 1990
Project Status Completed (Fiscal Year 1990)
Budget Amount *help
¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1990: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1989: ¥1,300,000 (Direct Cost: ¥1,300,000)
KeywordsVacuum ultraviolet / Oligonucleotide / Thymine / Radiation damage / Optical approximation / Synchrotron radiation / 放射線生成物作用 / 光学近似 / ピリミジンダイヤ- / 主鎖切断
Research Abstract

1. Thymidylyl- (3'->5') -thymidine (dTpdT) was irradiated in solid state (in vacuum) with monochromatic photons from synchrotron radiation over the wide range of wavelength : far-UV (300 - 200 nm), vacuum-UV (190 - 50 nm), soft X-rays (about 0.5 nm) and ^<60>Co gamma-rays. Photoproducts of dTpdT were analyzed by high performance liquid chromatography (HPLC), detected by absorbance at 220 nm and determined the quantities by the peak areas of HPLC chromatogram. The feasibility of optical approximation to photoproduct formation in dTpdT is studied from the viewpoint whether the results by ^<60>Co gamma-rays can be regarded as the superposition of the results by vacuum-UV.
The production of cyclobutane type thymine dimers and (6-4) photoproduct were highest at 260 nm, decreased toward shorter wavelengths and became undetectable below 140 nm. These two dipyrimidine photoproducts were produced efficiently in far-UV region only.
Main photoproducts induced by photons between 210 and 0.001 nm (^< … More 60>Co gamma-ray) were thymine (T), 3'-TMP and 5'-TMP, which were produced through destruction of deoxyribose moiety. The ratios among amounts of these photolysis products were almost independent on wavelength. The K-shell excitation of phosphorus induced by 2.153 keV (at resonance absorption peak of phosphorus atom) X-rays and following Auger effects had no special effect. These results indicate that deoxyribose moiety of dTpdT molecule is selectively destroyed when energies above 6 eV (wavelength below 200 nm) are absorbed through excitation, superexcitation or ionization of outer or inner shell electrons. Hence, these results do not conflict with the feasibility of the optical approximation for photoproduct induction by ^<60>Co gamma-rays.
2. Main products of oligonucleotide, (pdT)_<10>, irradiated by 175 MR of 2.153 keV X-ray were T, 5'-TMP and oligonucleotides with nucleotide number from 2 to 9. The 5'-TMP and each oligonucleotide photoproduct were produced approximately same number and their total number equaled to about the number of T, indicating that all deoxyribose were equally destroyed and one destruction produced one T and two nucleotide type products (mono and oligo). Less

Report

(3 results)
  • 1990 Annual Research Report   Final Research Report Summary
  • 1989 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] H.Yamada, K.Hieda: "Action spectra for the formation of cyclobutane dimer and (6ー4) photoproduct of thymine." Activity Report of Synchrotron Radiation Laboratory 1990, Univ. Tokyo, 1991. (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] M.Saitou, K.Hieda: "Action spectra (150ー300nm) for the formation of thymidine dimers and thymidine (6ー4) photoproducts in thymidylylーthymidine." Activity Report of Synchrotron Radiation Laboratory 1989, Univ. Tokyo, 49ー50, 1990.49-50 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] M. Saitou and K. Hieda: "Action spectra (150 - 300 nm) for the formation of thymidine dimers and thymidine (6-4) photoproducts in thymidylyl-thymidine." Activity Report of Synchrotron Radiation Laboratory 1989. Univ. Tokyo. 49-50 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] H. Yamada and K. Hieda: "Action spectra for the formation of cyclobutane dimer and (6-4) photoproduct of thymine." Activity Report of Synchrotron Radiation Laboratory 1990. Univ. Tokyo. (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1990 Final Research Report Summary
  • [Publications] H.Yamada,K.Hieda: "Action spectra for the formation of cyclobutane dimer and (6ー4) photoproduct of thymine." Activity Report,of synchrotron radiation laboratory in press. (1991)

    • Related Report
      1990 Annual Research Report
  • [Publications] M.Saito and K.Hieda: "Action spectra(150-300nm)for the formation of thymidine dimers and thymidine(6-4)photoproducts in thymidylyl-thymidine" Activity Report of Synchrotron Radiation Laboratory,1989. (1990)

    • Related Report
      1989 Annual Research Report

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Published: 1989-04-01   Modified: 2016-04-21  

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