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Molecular genetical basis of polyploid evolution in plants

Research Project

Project/Area Number 02404001
Research Category

Grant-in-Aid for General Scientific Research (A)

Allocation TypeSingle-year Grants
Research Field 遺伝学
Research InstitutionKyoto University

Principal Investigator

TSUNEWAKI Kouichiro  Kyoto Univ., Fac. Agr. Professor, 農学部, 教授 (20026438)

Co-Investigator(Kenkyū-buntansha) MIYASHITA N.  Kyoto Univ. Fac. Agr. Lecturer, 農学部, 助手 (20212243)
Project Period (FY) 1990 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥28,700,000 (Direct Cost: ¥28,700,000)
Fiscal Year 1993: ¥4,100,000 (Direct Cost: ¥4,100,000)
Fiscal Year 1992: ¥4,200,000 (Direct Cost: ¥4,200,000)
Fiscal Year 1991: ¥7,300,000 (Direct Cost: ¥7,300,000)
Fiscal Year 1990: ¥13,100,000 (Direct Cost: ¥13,100,000)
KeywordsWheat / Polyploid evolution / RFLP analysis / RFLP linkage map / Nuclear genome / Organellar genome / Genetic diversity / Phylogeny / 葉緑体DNA / 4塩基カッター分析 / ヌクレオチド多様度 / 異数体分析 / ヒストンタンパク質遺伝子 / ヒストン遺伝子結合タンパク質遺伝子 / ゲノミックDNAライブラリ- / RFLP座位 / 連鎖地図 / ナリテトラソミック分析 / コピ-数
Research Abstract

The aim of the present investigation is to provide the molecular basis for polyploid evolution in plants. For this, various species, diploid and polyploid, of twogenera, Triticum(wheat)and Aegilops, have been employed, and four problems, as described below, have been investigated. The main results obtained in a fouryear term are as follows :
A)Basic studies---A library of the genomic DNA clones of a common wheat cultivar Chinese Spring was constructed. Using these clones, RFLP between Chinese Spring and other common wheat accessions was tested. Among them, a spelta wheat revealed the largest RFLP to Chinese Spring, and their F_2 population (actually a population of F_3 lines)was raised. Linkage relationships were tested among all RFLP loci, leading to successful construction of the world-first 21 linkage groups of RFLP loci in common wheat.
B)Studies at the genome level---Using the DNA clones as probes which showed RFLP between Chinese Spring and Spelta, RFLP among a large number of acce … More ssions of de-, tetra- and hexaploid wheats as well as those of all Aegilops Sitopsis species, and Ae, squarrosa was investigated. The interspecific variation was much larger than the interspecific variation. T.urartu appeared to be the A genome donor to polyploid wheats. Emmer and Timopheevi groups of wheat were found to have originated diphyletically, the latter being of much recent origin than the former group. Common wheat revealed very high genetic homogeneity, and close relation to Emmer wheat, indicating recent oriin from Emmer wheat as a parent.
C)Studies at the chromosome level---RFLP loci were mapped on individual chromosomes and chromosome arms by nulli-tetrasomic and telosomic analysis, respectively. Homoeologous chromosomes and chromosome arms showed little homology as to the distibution of the RFLP loci probed with the same clones. This fact indicated high evolutionary change of the genomic DNA sequences probed with the present DNA clones.
D)Studies at the gene level---Nuclear genes for histones and for histone gene-binding proteins, chloroplast genes, rbcL, atpA and atpE, and mitochondrial genes, cox3 and atp6, were studied. The histone and histone gene-binding protein genes are mostly located on all three homoeologous loci in A,B and Dgenomes of common wheat. Apparently, those genes are evolutionary very conservative. The organellar genes also showed high evolutionary conservatism, although mitochondrial genome underwent great structural change. Less

Report

(5 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • 1991 Annual Research Report
  • 1990 Annual Research Report
  • Research Products

    (41 results)

All Other

All Publications (41 results)

  • [Publications] Liu,Y.-G.and K.Tsunewaki: "Restriction fragment length polymorphism(RFLP)analysis in wheat II Linkage maps of the RFLP sites in common wheat" Japanese Journal of Genetics. 66. 617-633 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Liu,Y.-G.,T.M.Ikeda and K.Tsunewaki: "Moderately repeated,dispersed,and highly variable(MRDHV)genomic sequences of common wheat usable for cultivar identification" Theoretical and Applied Genetics. 84. 535-543 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 常脇恒一郎: "コムギの倍数性と核ゲノム" 蛋白質核酸酵素. 37. 7-17 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Terachi,T.and K.Tsunewaki: "The molecular basis of genetic diversity among cytoplasms of Triticum and Aegilops,VIII.Mitochondrial RFLP analyses using cloned genes as probes" Molecular Biology and Evolution. 9. 917-931 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Takumi,S.,S.Nasuda,Y.-G.Liu and K.Tsunewaki: "Wheat phylogeny determined by RFLP analysis of nuclear DNA.I.Einkorn wheat" Japanese Journal of Genetics. 68. 73-79 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nasuda,S.,Y.-G.Liu,A.Sakamoto,T.Nakayama,M.Iwabuchi and K.Tsunewaki: "Chromosomal locations of the genes for histones and a histone gene-binding protein family HBP-1 in common wheat" Plant Molecular Biology. 22. 603-614 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki,K.,S.Takumi,N.Mori,T.Achiwa and Y.-G.Liu(分担執筆): "Nuclear and Organellar Genomes of Wheat Species" Kihara Memorial Yokohama Foundation for Biological Sciences, 333 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki,K.,Y.-G.Liu,S.Takumi,N.Mori,H.Nakamura,T.Terachi,V.J.Siregar and N.Miyashita(分担執筆): "Biodiversity and Wheat Improvement" John Wiley and Sons, 434 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Liu, Y.-G., N.Mori & K.Tsunewaki: "Restriction fragment length polymorphism(RFLP)analysis in wheat. I.genomic DNA library constuction and RFLP analysis in common wheat" Jpn. J.Gent.5. 367-380 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Terachi, T., Y.Ogihara & K.Tsunewaki: "The molecular basis of genetic diversity among cytoplasms of Triticum and Aegilops. 7.Rstriction endonuclease analysis of mitochondrial DNAs from polyploid wheats and their ancestral species" Theor. Appl. Genet. 80. 366-373 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewak, K., Y.-G.Liu, T.Terachi & N.Mori: "Wheat evolution revealed by the nuclear and organellar DNA analyzes" J.Genet. Mol. Biol. 1. 83-96

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki, K., S.Yamada & N.Mori: "Genetical studies on a Tibetan semi-wild wheat, Triticum aestivum ssp. tibetanum" jpn.J.Genet. 65. 353-365

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ikeda, T.M., M.Shidasaka, T.Terachi & K.Tsunewaki: "Biochemical and molecular studies in four alloplasmic wheats showing growth abnormality" Proc. Int. Symp. Cytopl. Engineer. Wheat. 149-155 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Liu, Y.-G., & K.Tsunewaki: "Restriction fragment length polymorphism(RFLP)analysis in wheat. II.Linkage maps of the RELP sites in common wheat" Jpn. J.Genet. 66. 617-633 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nasuda, S., Y.-G.Liu & K.Tsunewaki: "Identification of the chromosome arms and the position of centromeres in the RFLP maps of common wheat" Proc. Int. Symp. Cytopl. Engineer. Wheat. 73-78 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki, K., S.Takumi, N.Mori, T.Achiwa & Y.-G.Liu: "Origin of polyploid wheats revealed by RFLP analyzes" Proc. Int. Symp. Cytopl. Engineer. Wheat. 31-39 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ikeda, T.M., T.Terachi & K.Tsunewaki: "Variations in chloroplast proteins and nucleotide sequences of three chloroplast genes in Triticum and Aegilops" Jpn. J.Genet. 67. 111-123

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Liu, Y.-G., T.M.Ikeda & K.Tsunewaki: "Moderately repeated, dispersed, and highly variable(MRDHV)genomic sequneces of common wheat usable for cultivar identification" Theor. Appl. Genet. 84. 535-543 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Mori, N.& K.Tsunewaki: "Distribution of the necrosis and chlorosis genes in two wild tetraploid wheats, Triticum dicocoides and T.araraticum" Jpn. J.Genet. 67. 371-380 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Terachi, T.& K.Tsunewaki: "The molecular basis of genetic diversity among cytoplasms of Triticum and Aegilops. VIII.Mitochondrial RELP analyzes using cloned genes as probes" Molec. Biol. Evol. 9. 917-931 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki, K: "Aneuploid analyzes of hybrid necrosis and hybrid chlorosis in tetraploid wheats using the D-genome chromosome substitution lines of durum wheat" Genome. 35. 594-601 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nasuda, S., Y-G.Liu, A.Sakamoto, T.Nakayama, M.Iwabuchi & K.Tsunewaki: "Chromosomal locations of the genes for histones and a histone gene-binding protein family HBP-1 in common wheat" Plant Mol. Biol. 22. 603-614 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Takumi, S., S.Nasuda, Y.-G.Liu & K.Tsunewaki: "Wheat phylogeny determined by RFLP analysis of nuclear DNA.1. Einkorn wheat" Jpn. J.Genet. 68. 73-79 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki, K: "Genome-plasmon interactions in wheat" Jpn. J.Genet. 68. 1-34 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki, K., Y.-G.Liu, S.Takumi, N.Mori, H.Nakamura, T.Terachi, U.J.Siregar & N.Miyashita: "Wheat germplasm evaluation by RFLP analyzes of the nuclear and organellar DNAs" Biodiversity & Wheat Improv. 17-30

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tsunewaki,K.: "Genone-plasmon interactions in wheat" Japanese Journal of Genetics. 68. 1-34 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nasuda,S.,Y.-G.Liu,A.Sakamoto,T.Nakayama,M.Iwabuchi,K.Tsunewaki: "Chromosomal locations of the genes for histones and a histone gene-binding protein family HBP-1 in common wheat" Plant Molecular Biology. 22. 603-614 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Takumi,S.,S.Nasuda,Y.-G.Liu,K.Tsunewaki: "Wheat phylogeny determined by RFLP analysis of muclear DNA.1.Einkom wheat" Japanese Journal of Genetics. 68. 73-79 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 常脇恒一郎: "コムギ核ゲノムのRFLP分析" 育種学最近の進歩. 34. 15-22 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Terachi,T.,Y.Ogihara,K.Tsunewaki: "Wheat phylogeny revealed by the nucleotide sequence of rbeL gene" Proc 8th International Wheat Genetics Synposium,Beijing. (in press). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Miyashita,N.,N.Mori,K.Tsunewaki: "Molecular variation in two chloroplast DNA regions in ancestral species of wheat" Genetics. (in press). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Tsunewaki,K.,Y.-G.Liu,S.Takumi,N.Mori,H.Nakamura,T.Terachi,et al.: "Biodiversity and Wheat Improvement" John Wiley & Sons(分担執筆), 434 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Terachi, T. and K. Tsunewaki: "The molecular basis of genetic diversity among cytoplasms of Triticum and Aegilops. VIII. Mitochondrial RFLP analyses using cloned genes as probes" Molecular Biology and Evolution. 9. 917-931 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Liu, Y.-G., T. M. Ikeda and K. Tsunewaki: "Moderately repeated, dispersed, and highly variable (MRDHV) genomic sequences of common wheat usable for cultivar identification" Theoretical and Applied Genetics. 84. 535-543 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Ikeda, T. M., T. Terachi and K. Tsunewaki: "Variations in chloroplast proteins and nucleotide sequences of three chloroplast genes in Triticum and Aegilops" Japanese Journal of Genetics. 67. 111-123 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Liu,Y.ーG. and K.Tsunewaki: "Restriction fragment length polymorphism (RFLP) analysis in wheat.II.Linkage maps of the RFLP sites in common wheat" Japanese Journal of Genetics. 66. 617-633 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Tsunewaki,K.: "RFLP analysis of common wheat and its ancestors" Wheat Information Service. 72. 67-69 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Mori,N.,Y.ーG.Liu,C.Nakamura and K.Tsunewaki: "Genetic differentiation between two wild tetraploid wheats,Triticum dicoccoides and T.araraticum as revealed by RFLP analysis of organellar and nuclear DNA" Wheat Information Service. 72. 76-78 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Tsunewaki,K.: "A historical review of cytoplasmic studies in wheat" Proceedings of the Kihara Memorial International Symposium on Cytoplasmic Engineering in Wheat,Sapporo.

    • Related Report
      1991 Annual Research Report
  • [Publications] Tsunewaki,K.,S.Takumi,N.Mori,T.Achiwa and Y.ーG.Liu: "Origin of polyploid wheats revealed by RFLP analyses" Proceedings of the Kihara Memorial International Symposium on Cytoplasmic Engineering in Wheat,Sapporo.

    • Related Report
      1991 Annual Research Report
  • [Publications] Liu,Y.G.,N.Mori and K.Tsunewaki: "Restriction fragment length polymogphism (RFLP) analysis in wheat.J.Genomic DNA library construction and RFLP analysis in common wheat" Japanese Journal of Genetics. 65. 367-380 (1990)

    • Related Report
      1990 Annual Research Report

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Published: 1990-04-01   Modified: 2016-04-21  

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