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A study on the regulation of gene expression in sea urchin embryo.

Research Project

Project/Area Number 02454022
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 動物発生・生理学
Research InstitutionHiroshima University

Principal Investigator

SHIMADA Hiraku  Hiroshima Univ. Faculty of Science, Professor, 理学部, 教授 (70011559)

Co-Investigator(Kenkyū-buntansha) YAMADA Kazumi  Hiroshima Univ., Faculty of Science, Research Associate, 理学部, 助手 (80220367)
Project Period (FY) 1990 – 1991
Project Status Completed (Fiscal Year 1991)
Budget Amount *help
¥6,800,000 (Direct Cost: ¥6,800,000)
Fiscal Year 1991: ¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 1990: ¥4,300,000 (Direct Cost: ¥4,300,000)
KeywordsSea urchin / DNA / Arylsulfatase / Gene / Regulation of transcription / Development / Trans-acting factor / Cis-element / DNA結合蛋白質 / サイレンサ- / エンハンサ- / 初期発生 / 遺伝子発現 / ポリピリミジン配列 / 転写制御
Research Abstract

In order to get an insight into the mechanism regulating gene expression during early development, we have started our research on the mechanism regulating the transcription of arylsulfatase (Ars) gene in the sea urchin embryo. Results of the present study are summarized as follows.
(1) In addition to the minimal promoter containing a TATA sequence, the 5' flanking region of the Ars gene contains several transcription enhancer sequences in between -3kbp and -1.9kbp, and a transcription silencer sequence in between -1.5kbp and -1.3kbp.
(2) Many proteins that bind to enhancer and silencer regions were detected by gel band mobility shify assay, and the nucleotide sequences within these regions that were protected by these proteins were determined by footprinting. Since patterns of appearance of these proteins in nuclei changed depending on developmental stages, it was assumed that these proteins are transacting factors for the Ars gene transcription.
(3) The silencer region is a CT-rich region with nearly 90% of the bases in this region occupied by cytosine or thymine. It was revealed by Sl nuclease assay that a (CT)_<11> tract in this region can take a triplex DNA configuration that is expected to be a recognizing site for specific trans-acting factors. It was found by south-western blotting that several nuclear proteins bind to the silencer region, and some of them appear and disappear depending on developmental stages. We have already started the isolation of these DNA binding proteins.

Report

(3 results)
  • 1991 Annual Research Report   Final Research Report Summary
  • 1990 Annual Research Report
  • Research Products

    (15 results)

All Other

All Publications (15 results)

  • [Publications] Koji Akasaka: "Spatial patterns of arylsulfatase mRNA expression in sea urchin embryo." Development,Growth and Differentiation. 32. 9-13 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Koji Akasaka: "Histochemical detection of arylsulfatase actiity in sea urchin embryos." Development,Growth and Differentiation. 32. 293-298 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Koji Akasaka: "Effects of aphidicolin on arylsufatase gene expressio in sea urchin embryos." Development,Growth and Differentiation. 32. 299-302 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kazumi Yamada: "Cis-acting elements regulating the expression of arysulfatase gene in sea urchin embryo." Developmental Biology. (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Akasaka, K., Ueda, T., Higashinakagawa, T., Yamada, K. and Shimada, H.: "Spatial patterns of arylsulfatase mRNA expression in sea urchin embryo." Development, Growth and Differentiation. 32. 9-13 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Akasaka, K., Akimoto, Y., Sato, M., Hirano, H. and Shimada, H.: "Histochemical detection of arylsulfatase activity in sea urchin embryos." Development, Growth and Differentiation. 32. 293-298 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Akasaka, K., Yamada, K., Sekine, K. and Shimada, H.: "Effects of aphidicolin on arylsulfatase gene expression in sea urchin embryos." Development, Growth and Differentiation. 32. 299-302 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Yamada, K., Eguchi, S., Yamamoto, T., Akasaka, K. and Shimada, H.: "Cis-acting elements regulating the expression of arylsulfatase gene in sea urchin embryo." Developmental Biology. (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Koji Akasaka: "Spatial patterns of arylsulfatase mRNA expression in sea urchin embryo." Development,Growth and Differentiation. 32. 9-13 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] Koji Akasaka: "Histochemical detection of arylsulfatase activity in sea urchin embryos." Development,Growth and Differentiation. 32. 293-298 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] Koji Akasaka: "Effects of aphidicolin on arylsulfatase gene expression in sea urchin embryos." Development,Growth and Differentiation. 32. 299-302 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] Kazumi Yamada: "Cisーacting elements regulating the expression of arylsulfatase gene in sea urchin embryo." Developmental Biology. (1992)

    • Related Report
      1991 Annual Research Report
  • [Publications] K.Akasaka,T.Ueda,T.Higashinakagawa,K.Yamada & H.Shimada: "Spatial patterns of Arylsulfatase mRNA Expression in Sea Urchin Embryo" Development,Growth and Differentiation. 32. 9-13 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] K.Akasaka,Y.Akimoto,M.Sato,H.Hirano and H.Shimada: "Histochemical Detection of Arylsulfatase Activity in Sea Urchin Embryos" Development,Growth and Differentiation. 32. 293-298 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] K.Akasaka,K.Yamada,K.Sekine and H.Shimada: "Effects of Aphidicolin on Arylsulfatase Gene Expression in Sea Urchin Embryos." Development,Growth and Differentiation. 32. 299-302 (1990)

    • Related Report
      1990 Annual Research Report

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Published: 1990-04-01   Modified: 2016-04-21  

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