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Involvement of Chromosome in Regulation of DNA Replication and Repair

Research Project

Project/Area Number 02454489
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Biological pharmacy
Research InstitutionRIKEN (The Institute of Physical and Chemical Research)

Principal Investigator

HANAOKA Fumio  RIKEN, Cell. Physiol. Lab., Chief Scientist, 細胞生理学研究室, 主任研究員 (50012670)

Co-Investigator(Kenkyū-buntansha) SUGASAWA Kaoru  RIKEN, Cell. Physiol. Lab., Research Scientist, 細胞生理学研究室, 研究員 (70202124)
MIYAZAWA Hiroshi  RIKEN, Cell. Physiol. Lab., Research Scientist, 細胞生理学研究室, 研究員 (40183967)
Project Period (FY) 1990 – 1991
Project Status Completed (Fiscal Year 1991)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1991: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsSV40 virus / minichromosome / cell-free replication system / nucleosome / DNA topoisomerase / UV light / cell-free repair system / xeroderma pigmentosum / SV40DNA / ス-パ-ヘリックス
Research Abstract

We have developed a call-free system for replication of SV40 minichromosomes with purified proteins.
Since this reconstituted system lacked activity of de novo nucleosome assembly, we could specifically examine the behavior of parental histones during chromosome replication. Solution hybridization analyses suggested that the histones were not completely detached from but somehow associated with template DNA. Using strand-specific probes and MNase digested nascent mononucleosomal DNA, we obtained the results indicating that the parental histone octamers were segregated distributively between leading and lagging strands during the chromosome replication with purified proteifis.
When SV40 chromosomes were replicated with topoI alone as a swivelase, the reaction produced shorter leading strands but those of mature size were accumulated in the reaction supplemented with topo II. These results indicate that topo II has a crucial role as a swivelase in the late stage of SV40 chromosome replicat … More ion in vitro.
On the other hand, we have developed a cell-free system supporting repair reactions on DNA organized into hucleosomes, that is, SV40 chromosomes. Standard reaction mixtures contained UV-irradiated SV40 chromosomes, unirradiated plasmid DNA, whole cell extracts of HeLa cells(Manley's extracts), ATP-regenerating system and several low molecular weight materials including[alpha-^<32>P]dCTP. After incubated at 30゚C, DNAs were isolated, digested with EcoRI and separated by agarose gel electrophoresis. Repair synthesis as well as nick-translation of DNAs were detected by autoradiography. DNA synthesis on SV40 DNA was dependent on doses of irradiated DNA. When we used cell extracts made from XP-A or XP-C cells in place of HeLa cell extracts, the UV-dependent DNA synthesis decreased remarkably. Mixing of XP-A and XP-
C cell extracts restored the DNA synthesis to similar level as HeLa cell extracts. Thus our in vitro system appears to be useful for reconstituting at least some features of chromosomal DNA excision repair. Less

Report

(3 results)
  • 1991 Annual Research Report   Final Research Report Summary
  • 1990 Annual Research Report
  • Research Products

    (22 results)

All Other

All Publications (22 results)

  • [Publications] K.Sugasawa: "Assembly of nascent DNA into nucleosome structure in SV40 chromosomes by HeLa cell-free extract" J.Virol.64. 4820-4829 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Y.Ishimi: "Replication of the simian virus 40 chromosome with purified proteins" J.Biol.Chem.266. 16141-16148 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Y.Ishimi: "Topoisomerase II plays an essential role as a swivelase in the late stage of SV40 chromosome replication in vitro" J.Biol.Chem.267. 462-466 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] K.Sugasawa: "Non-conservative segregation of parental nucleosomes during simian virus 40 chromosome replication in vitro" Proc.Natl.Acad.Sci.USA. 89. 1055-1059 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 菅澤 薫: "染色体複製とヌクレオソ-ム" 実験医学. 9. 1436-1441 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 関 政幸: "DNA複製・修復" 蛋白質・核酸・酵素. 36. 2013-2019 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] K. Sugasawa et al.: "Assembly of nascent DNA into nucleosome structure in SV40 chromosomes by HeLa cell-free extract" J. Virol.64. 4820-4829 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Y. Ishimi et al.: "Replication of the simian virus 40 chromosome with purified proteins" J. Biol. Chem.266. 16141-16148 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Y. Ishimi et al.: "Topoisomerase II plays an essential role as a swivelase in the late stage of SV40 chromosome replication in vitro" J. Biol. Chem.267. 462-466 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] K. Sugasawa et al.: "Non-conservative segregation of parental nucleosomes during simian virus 40 chromosome replication in vitro" Proc. Natl. Acad. Sci. USA. 89. 1055-1059 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] K. Sugasawa et al.: "Chromosome replication and nucleosome (in Japanese)" Jikken Igaku. 9. 1436-1441 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] M. Seki et al.: "DNA replication and DNA repair (in Japanese)" Protein, Nucleic Acid and Enzyme. 36. 2013-2019 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Y.Ishimi: "Replication of the simian virus 40 chromosome with purified proteins" J.Biol.Chem.266. 16141-16148 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Y.Ishimi: "Topoisomerase II plays an essential role as a swivelase in the late stage of SV40 chromosome replication in vitro" J.Biol.Chem.267. 462-466 (1992)

    • Related Report
      1991 Annual Research Report
  • [Publications] K.Sugasawa: "Non-conservative segregation of parental nucleosomes during simian virus 40 chromosome replication in vitro" proc.Natl.Acad.Sci.USA. 89. 1055-1059 (1992)

    • Related Report
      1991 Annual Research Report
  • [Publications] 菅澤 薫: "染色体複製とヌクレオソ-ム" 実験医学. 9. 1436-1441 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] M.Asijo: "Purification and characterization of type II topoisomerase from mouse FM3A cells:phosphorylation of topoisomerase II and modification of its activity" Biochemistry. 29. 583-590 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] M.Seki: "DNA helicase and nucleosideー5'ーtriphosphatase activities of polyoma virus large tumor antigen" Biochemistry. 29. 1003-1009 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] C.Masutani: "DNA primase stimulatory factor from mouse FM3A cells has an RNase H activity:purification of the factor and analysis of the stimulation" J.Biol.Chem.265. 10210-10216 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] K.Sugasawa: "Assembly of nascent DNA into nucleosome structure in SV40 Chromosomes by HeLa cell free extract" J.Virol.64. 4820-4829 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] R.TakadaーTakayama: "Purification and characterization of mouse DNA polymerase α devoid of prirmase activity" FEBS Lett.273. 27-30 (1990)

    • Related Report
      1990 Annual Research Report
  • [Publications] M.Kudo: "Human ubiquitinーactivating enzyme(E1):compensation for heatーlabile mouse E1 and its gene localization on the X chromosome" Exp.Cell Res.192. 110-117 (1991)

    • Related Report
      1990 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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