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Genetic research on the Ryukyuan subspecies of the Ayu

Research Project

Project/Area Number 02660202
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field General fisheries
Research InstitutionDept. of Mar. Sci., Coll. of Sci., Univ. of the Ryukyus

Principal Investigator

SHOKITA Shigemitsu (1991)  Univ. Ryukyus, Dept. Mar. Sci., Assoc. Prof., 理学部, 助教授 (50045027)

西田 睦 (1990)  琉球大学, 理学部, 助手 (90136896)

Co-Investigator(Kenkyū-buntansha) NISHIDA Mutsumi  Univ. Ryukyus, Dept. Mar. Sci., Assist. Prof., 理学部, 講師 (90136896)
Project Period (FY) 1990 – 1991
Project Status Completed (Fiscal Year 1991)
Budget Amount *help
¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 1991: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1990: ¥900,000 (Direct Cost: ¥900,000)
KeywordsAyu / Ryukyu-ayu / Osmerid fishes / Isozyme / Mitochondrial DNA / Genetic variation / Phylogenetic relationship / アイソザム / 遺伝的差異 / 遺伝的特徴
Research Abstract

Ayu in the Ryukyu Islands was recently recognized as a new subspecies, Plecoglossus altivelis ryukyuensis. To examine genetic characteristics of this ryukyuan subspecies, we investigated and compared genetic variation of the both Ayu subspecies and some related osmeroid fishes by using allozyme and mitochondrial DNA (mtDNA) analyses.
Allozyme analyses showed that the both Ayu subspecies were distantly related with other osmeroid fishes. Results of various phylogenetic analyses of allozyme data did not support a phylogenetic hypothesis by Howes and Sanford (1987) who proposed that the Ayu is closely related with Osmerus or Hypomesus.
For mtDNA examination, We used the PCR-mediated sequencing method, which is a newly established method, instead of the restriction site polymorphism analysis. Effective procedures of DNA extraction were examined. Experimental conditions of PCR amplification and DNA sequencing were also examined in detail using primers which were designed for amplification of various segments in mtDNA. Results of these examinations showed that many segments in mtDNA could be amplified and sequenced successfully when appropiate experimental conditions were employed. Sequence data of a 453-base-pair segment, including a part of the NAD dehydrogenase 4 gene, the histidine tRNA gene, and a part of the serine tRNA gene, suggested a genetic relationship similar to that from allozyme data. We conclude that the PCR-mediated DNA sequencing will provide a quite powerful tool for further genetic studies of the Ayu as well as other organisms.

Report

(3 results)
  • 1991 Annual Research Report   Final Research Report Summary
  • 1990 Annual Research Report
  • Research Products

    (35 results)

All Other

All Publications (35 results)

  • [Publications] Shokita,S.and N.Shikatani: "Complete larval development of the land-crab,Cardisome hirtipes Dana(Brachyura:Gecarcinidae)reared in the laboratory" Researches on Crustacea. 18. 1-14 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 諸喜田 茂充: "沖縄島山原の陸水産大型動物相とその変動" 沖縄生物学会誌. 27. 3-13 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Shikatani,N.and S.Shokita: "First zoeae of seven trapeziid crabs(Brachyura,Trapeziidae)from the Ryukyu Islands,reared in the laboratory" Galaxea. 9. 175-191 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 諸喜田 茂充: "西表島の陸水甲殻類相と分布" 「南西諸島における野生生物の種の保存に不可欠な諸条件に関する研究」(環境庁). 305-317 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 諸喜田 茂充: "沖縄の陸水動物の現状と問題点" 「沖縄の自然と保全対策」(沖縄総合事務局). 18-40 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 西田 睦: "アユの分布とリュウキュウアユ" 水産増殖. 32. 200-203 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 西田 睦: "分子データから探る琉球列島の生物地理" 沖縄生物学会誌. 28. 25-42 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 諸喜田 茂充: "琉球列島の陸産・陸水産甲殻類とその保護" 「南西諸島における野生生物の種の保存に不可欠な諸条件に関する研究」(環境庁). 394-407 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 西田 睦: "サンゴ礁の島に住むアユ" UP. 20. 30-36 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 西田 睦.澤志 泰正,西島 信昇.東 幹夫,藤本 治彦: "リュウキュウアユの分布と生息状況-1986年の調査結果-" 日水誌. 58. 199-206 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 澤志 泰正.佐藤 尚二,西田 睦: "奄美大島南部におけるリュウキュウアユの分布ならびに生息状況-1990年12月の調査結果-" 沖縄島嶼研究. 10. 43-57 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 澤志 泰正.藤本 治彦,東 幹夫.西島 信昇,西田 睦: "琉球列島北部におけるアユの分布ならびにその遺伝的・形態的特徴" 日水誌. 59. (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kumazawa,Y.and M.Nishida: "Sequence evolution of the mitochondrial tRNA genes and deep-branch animal phylogenetics" J.Mol.Evol.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Eguchi,T.and M.Nishida: "Electrophoretic examination of phylogenetic relationship of the Ayu(Plecoglossus)and some osmerid fishes"

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Shokita, S. and N. Shikatani.: "Complete larval development of the land-crab, Cardisome hirtipes Dana (Brachyura:Gecarcinidae) reared in the laboratory." Researches on Crustacea. 18. 1-14 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Shokita, S.: "Inland-water mcrofauna and their fluctuations in the northern part of Okinawa Island, the Ryukyus." Biol. Mag. Okinawa. 28. 25-42 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Shikatani, N. and S. Shokita.: "First zoeae of seven trapeziid crabs (Brachyura, Trapeziidae) from the Ryukyu Islands, reared in the laboratory." Galaxea. 9. 175-191 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Shokita, S.: "Distribution of freshwater crustaceans in Iriomote Island." Study of Essential Factors for Preservation of Wildlife in Nansei Islands. 305-317 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Nishida, M.: "Notes on the range of the ayu Plecoglossus altivelis with reference to the Ryukyuan subspecies." Suisanzoshoku. 38. 200-203 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Nishida, M.: "Molecular approach to the biogeography of the Ryukyu Islands." Biol. Mag. Okinawa. 28. 25-42 (1990)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Shokita, S.: "Conservation of terrestrial and freshwater crustaceans in the Ryukyu Islands." Study of Essential Factors for Preservation of Wildlife in Nansei Islands. 394-407 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Nishida, M.: "Ayu living on coral-reef islands." UP. 20(4). 30-36 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Nishida, M., Y. Sawashi, S. Nishijima, M. Azuma, and H.Fujimoto.: "Distribution and abundance of the Ryukyuan subspecies of the Ayu Plecoglossus altivelis ryukyuensis: Results of a survey made in 1986." Nippon Suisan Gakkaishi. 58. 199-206 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sawashi, Y., S. Satou, and M. Nishida.: "Distribution and abundance of the Ryukyu-ayu, Plecoglossus altivelis ryukyuensis, in the northern part of Amami-oshima Island, central Ryukyus: Results of a survey in December,1990." Island Studies in Okinawa. 10. 43-57 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Sawashi, Y., H. Fujimoto, M. Azuma, S. Nishijima, and M. Nishida.: "Genetic and morphological characteristics and distribution of the Ayu Plecoglossus altivelis in the northern Ryukyus." Nippon Suisan Gakkaishi. 59. (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Kumazawa, Y. and M. Nishida.: "Sequence evolution of the mitochondrial tRNA genes and deep-branch animal phylogenetics." J. of Mol. Evol.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] Eguchi, T. and M. Nishida.: "Electrophoretic examination of phylogenetic relationship of the Ayu (Plecoglossus) with osmerid fishes."

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1991 Final Research Report Summary
  • [Publications] 西田 睦: "アユの分布とリュウキュウアユ" 水産増殖. 38. 200-203 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] 西田 睦: "分子デ-タから採る琉球列島の生物地理" 沖縄生物学会誌. 28. 25-42 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] 西田 睦,澤志 泰正,西島 信昇,東 幹夫,藤本 治彦: "リュウキュウアユの分布と生息状況ー1986年の調査結果ー" 日本水産学会誌. 52. (1992)

    • Related Report
      1991 Annual Research Report
  • [Publications] 澤志 泰正,藤本 治彦,東 幹夫,西島 信昇,西田 睦: "琉球列島北部におけるアユの分布ならびにその遺伝的・形態的特徴" 日本水産学会誌.

    • Related Report
      1991 Annual Research Report
  • [Publications] Nishida,M.and T.Eguchi: "An electrophoretic analysis of phylogenetic relationships of the Ayu Plecoglossus." Japan.J.Ichthyol.

    • Related Report
      1991 Annual Research Report
  • [Publications] 諸喜田 茂充,吉野 哲夫,比嘉 義視: "奄美大島の河川産魚類と分布" 環境庁「南西諸島における野生生物の種の保存に不可欠な諸条件に関する研究」. 227-236 (1989)

    • Related Report
      1991 Annual Research Report
  • [Publications] Shokita,S.,Kakazu,K.,Tomori,A.& Toma,T.(ed.)Mamaguchi,M.(English ed.): "Aquaculture in Tropical Areao" Midori Shobo, 360 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Nishida,M.and T.Eguchi: "An electrophoretic analysis of phylogenetic relationships of the ayu Plecoglossus to smelt fishes of the family Osmeridae." Japan.J.Ichthyol.

    • Related Report
      1990 Annual Research Report

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Published: 1990-04-01   Modified: 2016-04-21  

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