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Molecular Population Genetics of Duplicated Genes in Drosophila.

Research Project

Project/Area Number 03404001
Research Category

Grant-in-Aid for General Scientific Research (A)

Allocation TypeSingle-year Grants
Research Field 遺伝学
Research InstitutionKYUSHU UNIVERSITY

Principal Investigator

YAMAZAKI Tsuneyuki  Kyusyu Univ., Fac.of Sci., Prof., 理学部, 教授 (10108649)

Co-Investigator(Kenkyū-buntansha) NITASAKA E  Kyusyu Univ., Fac.of Sci., Reseach Associate, 理学部, 助手 (60222189)
HARADA K  Kyusyu Univ., Fac.of Sci., Reseach Associate, 理学部, 助手 (40150396)
高野 敏行  九州大学, 理学部, 助手 (90202150)
Project Period (FY) 1991 – 1994
Project Status Completed (Fiscal Year 1994)
Budget Amount *help
¥25,900,000 (Direct Cost: ¥25,900,000)
Fiscal Year 1994: ¥4,400,000 (Direct Cost: ¥4,400,000)
Fiscal Year 1993: ¥4,400,000 (Direct Cost: ¥4,400,000)
Fiscal Year 1992: ¥6,100,000 (Direct Cost: ¥6,100,000)
Fiscal Year 1991: ¥11,000,000 (Direct Cost: ¥11,000,000)
KeywordsDrosophila / duplicated genes / amylase / transposon / 遺伝的多型 / 分子進化 / 共調進化 / 適応進化 / 分子集団遺伝学 / 突然変異 / アミラ-ゼ遺伝子 / ヒ-トショック遺伝子
Research Abstract

There are many duplicated genes including transposable slements, in the genome of higher organisms. In the present research project we mainly investigated molecular mechanisms of adaptive evolution in amylase system of Drosophila as well as evolution of a transposable element I
From the uncleotide sequence data of duplicated Amy genes in 8 sibling species in the melanogaster species subgroup we found a strong within species similarity between the duplicated loci, in contrast to a strong similartty in the 5' and 3' flanking regions within each locus (proximal or distal) throughout the species subgroup. This result indicates that concerted evolution occurred only in the Amy coding region and that differentiated evolution between the duplication occurred in the flanking regions. The detailed analysis of the 5'-flanking regions of the duplicated loci showed that only about 450 bp immediately upstream to the translation intiation site of the two paralogous genes had sequence similarities, indicating that the coding region of the ancestral Amy gene duplicated together with 450 bp of the 5'-flanking region as one unit.
I elements are one of the retroposon and control I-R hybrid dysgenesis in Drosophila melanogaster. To study the evolution of I elements, we cloned them from D.melanogaster species complex and determined the sequences. All I elements of D.mauritiana, D.sechellia and D.simulans are more closely related to the chromosomal I elements of D.melanogaster than to the chromocentral I elements. These findings demonstrate that the origin of the defective chromocentral I elements of D.melanogaster occurred before the time of species diverged and the chromosomal I elements were eliminated. The chromosomal I elements reinvaded in D.melanogaster recently, possibly introduced from D.simulans by horizontal transmission.

Report

(5 results)
  • 1994 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • 1992 Annual Research Report
  • 1991 Annual Research Report
  • Research Products

    (32 results)

All Other

All Publications (32 results)

  • [Publications] Yamaguchi,Y.,et al.: "Molecular analysis of Gpdh null mutations that arose in mutation accumulatlon experiments in Drosophila melanogaster" Heredity. 73. 397-404 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Nitasaka,E.,et al.: "The relationship between DNA structural variation and activities of P elements in P and Q strains of Drosophila melanogaster." Heredity. 73. 608-615 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Shibata,H.,et al.: "A comparative study of the enzymological features of α-amylase in the Drosophila melanogaster species subgroup." Jpn.J.Genet.69. 251-258 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Inomata,N.,et al.: "Evolutionary relationships and sequence variation of α-amylase variants encoded by duplicated genes in the Amylocus of Drosophil melanogaster." Genetics. (印刷中). (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Shibata,H.,et al.: "Molecular evolution of the Duplicated Amylocus in the Drosophila melanogaster species subgroup:Concerted evolution only in the codiregion and an excess of nonsynonymous substitutions in speciation." Genetics. (印刷中). (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Yamaguchi, Y., et al.: "Molecular analysis of Gpdh null mutations that arose in mutation accumulation experiments in Drosophila melanogaster." Heredity. 73. 397-404 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Nitasaka, E., et al.: "The relationship between DNA structural variation and activities of Pelements in P and Q strains of Drosophila melanogaster." Heredity. 73. 608-615 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Shibata, H., et al.: "A comparative study of the enzymological features of a-amylase in the Drosophila melanogaster species subgroup." Jpn.J.Genet.69. 251-258 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Inomata, N., et al.: "Evolutionaly relationships and sequence variation of alpha-amylase variants encoded by duplicated genes in the Amy locus of Drosophila melanogaster." Genetics. (in press). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Shibata, H., et al.: "Molecular evolution fo the Duplicated Amy locus in the Drosophila melanogaster species subgroup : Concerted evolution only in the coding region and an excess of nonsynonymous substitutions in speciation." Gewnetics. (in press). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Yamaguchi,Y.: "Molecular analysis of Gpdh nullmutations that arose in mutation accumulation experiments in Drosophila melanogaster." Heredity. 73. 397-404 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nitasaka,E.: "The relationship between DNA structural variation and activities of Pelements in Pand Q strains of Drosophila melanogaster." Heredity. 73. 608-615 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Shibata,H.: "A comparative study of the enzymological features of 2-amylase in the Drosophila melanogaster species subgronp." Jpn.J.Genet.69. 251-258 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Inomata,N.: "Evolutionary relationships and sequence variation of 2-amylase variants encodea by duplicated genes in the Amylocus of Drosophila melanogster." Genetics. (印刷中). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Shibata,H.: "Molecular evolution of the Duplicated Amy locus in the Drosophila melanogaster species sukgroip cocerted evolution only in the coding regi on and anexcess of nonsynonymous substitutions in speciation." Genetics. (印刷中). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nitasaka,E.,and T.Yamazaki: "The relationship between DNA structural variations and activities of Pelements in typical P and Q strains of Drosophila melanogaster." Heredity. (印刷中). (1944)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nitasaka,E.,and M.M.Green and T.Yamazaki: "The molecular analysis of brown eye color mutatuons isolated from geographically discrete populations of Drosophila melanogaster." Proc.Natl.Acad.Sci.USA.(印刷中). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Harada,K.,S.Kusakabe,T.Yamazaki and T.Mukai: "Spontaneous mutations in null and band-morph mutations of enzyme lou in Drosophila melanogaster." Jpn.J.Genet.(印刷中). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Yamaguchi,Y.,T.Takano,T,Yamazaki and K.Harada: "Molecuar analysis of Gpdh null mutations that arose in mutation accumulation experimentsin Drosophila melanogaster." Heredity.(印刷中). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] SHibata,H.and T.Yamazaki: "A comparative stndy of enzymological features of alpha-amylase in the Drosophila melanogaster species subgroup." Jpn.J.Genet.(印刷中). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nitasaka,E.,and Yamazaki,T.: "The molecular analysis of brown eye color mutations isolated from geagraphically discrete populations of Drosophila me lanogaster." Proc.Natl.Acad.Sci.USA. (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] Harada,K.,Kusakave,S.and Mukai,T.: "Comparative study of P element activity in two natural populations of Drosophila ne lanogaster." Jpn.J.Genet.66. 725-737 (1991)

    • Related Report
      1992 Annual Research Report
  • [Publications] Harada,K.,Kusakabe,S.and Mukai,T.,Yamazaki,T.: "Spontaneous mutation rates in null and band-morph mutations of enzyme loci in Drsophila melanogaster." Genetics.

    • Related Report
      1992 Annual Research Report
  • [Publications] Yamaguch,Y.,Harada,K.,Takano,T.S.and Yamazaki,T.: "Molecular analysis of spontaneous Gpdh null mutations in Drosophila melanogaster." Genetics.

    • Related Report
      1992 Annual Research Report
  • [Publications] Nitasaka,E.and Yamazaki,T.: "The relationship between DNA structural variations and activities of P elements in P and Q strains of Drosophila melanogatser." Genetical Research. (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] Harada,K.: "Comparative study of P element activity in two natural populations of Drosophila melanogaster." Japanese Journal of Genetics. 66. 725-737 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Harada,K.: "Spontaneous mutasion rates in null and bandーmorph mutations of enzyme loci in Drosophila melanogaster." Proc.Natl.Acad.Sci.USA.

    • Related Report
      1991 Annual Research Report
  • [Publications] Takano,T.S.: "The genetic structure of natural populations of Drosophila melanogaster.XXII.Comparative study of DNA polymorphisms in northern natural populations." Genetics. 129. 753-761 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Takano,T,S.: "DNA polymorphiosm and the origin of protein polymorphism at the Gpdh locus of Drosophila melanogaster." Population PaleoーGenetics:Proceeding of the Secenteenth Taniguchi International Symposium on Biophysics,ed.N.Takahata.Japan Scientific Societies Press.(1992)

    • Related Report
      1991 Annual Research Report
  • [Publications] Nitasaka,E.: "A novel eye morphology induced by P element in somatic tissue of Drosophila melanogaster." Mol.Gen.Genet.227. 181-186 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Nitasaka,E.: "Relationship between DNA structural variations and activities of P elements in typical P and Q strains of Drosophila melanogaster." Genet.Res.(1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Nitasaka,E.: "Genetic variations and regulation of P elements in Drosophila melanogaster." M.Kimura and N.Takahata,Japan Sci.Soc.Press,Tokyo/Springerヒeriag,Berlin., (1991)

    • Related Report
      1991 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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