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Development of cell-free transcription system for a study of tissue-specific transcriptional regulation in plant gene

Research Project

Project/Area Number 03554027
Research Category

Grant-in-Aid for Developmental Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 植物生理学
Research InstitutionNagoya University

Principal Investigator

YAMAZAKI Ken-ichi  Nagoya Univ., Sch.Agr.Sci., Assistant, 農学部, 助手 (40182480)

Co-Investigator(Kenkyū-buntansha) NATORI Yohei  Nisshin Flour Milling Co., Ltd., Central Research Inst., Researcher, 中央研究所, 専門研究員
YAMAGUCHI Junji  Nagoya Univ., Sch.Agr.Sci., Assistant, 農学部, 助手 (10183120)
Project Period (FY) 1991 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥13,600,000 (Direct Cost: ¥13,600,000)
Fiscal Year 1993: ¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 1992: ¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 1991: ¥6,100,000 (Direct Cost: ¥6,100,000)
Keywordsplant / gene expression / in vitro transcription / nuclear extract / RNA polymerase / transcription system / RNAポリメラーゼII / RNAポリメラ-ゼ
Research Abstract

An assay system that allows the rapid, direct, and quantitative detection of promoter-dependent transcription in vitro with nuclear extracts from tobacco cells has now been developed. The transcriptional machinery from tobacco cell nuclei effectively and accurately transcribes specific genes, and the optimum conditions for such a system are described. The system consists of a protein raction extracted from the nuclei of suspension-cultured tobacco cells (TBY-2), substrates, and an exogenously added plasmid DNA template. Specific initiation at the promoter was determined by analysis of the sizes of transcripts on a polyacrylamide gel that contained 8 M urea. Our system using a plasmid DNA template, based essentially on a G-free sequence system, was developed to elucidate the function of plant trans-acting factors that influence the activity of RNA polymerase II.However, further modifications that allow us to elucidate tissue-specific transcriptional activation may be required from now on.

Report

(4 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • 1991 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] 山口 淳二: "Isolation and characterization of nuclei from rice embryos." Cell Structure & Function. 17. 87-92 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 椋本 藤夫: "DNA sequence requirement of a TATA element-binding protein from Arabidopsis for transcription in vitro." Plant Mol Biol. 23. 995-1003 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 山口 雄記: "Preparation of an in vitro Transcription System of Plant Origin,with Methods and Templates for Assessing Its Fiderity." Plant Mol Biol Manual. (印刷中). (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 武田 穰: "Bending of DNA in solution caused by a protein from Arabidopsis that binds to a TATA element." Biosci Biotech Biochem. (印刷中). (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 山崎健一: "植物全能性の分子生物学(駒嶺穆 編)試験管内転写系による植物転写因子の機能解析" 朝倉書店, 305 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 山崎健一: "蛋白質核酸酵素 植物遺伝子の転写装置とその調節機構" 共立出版, 372 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Yamaguchi, J., Lim, P-Y., Aratani, K.& Akazawa, T.: "Isolatio and characterization of nuclei from rice embyos." Cell Structure & Function. 17. 87-92 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Mukumoto, F., Hirose, S., Imaseki, H.& Yamazaki, K.: "DNA sequence requirement of a TATA element-binding protein from Arabidopsis for transcription in vitro." Plant Mol Biol. 23. 995-1003 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Yamaguchi, Y, Mukumoto F, Imaseki H, Yamazaki, K.: "Preparation of an in vitro Transcription System of Plant Origin, with Methods and Templates for Assessing Its Fiderity." Plant Mol Biol Manual. (in press). (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Takeda, Y., Hirokawa, H.& Yamazaki, K.: "Bending of DNA in solution caused by a protein from Arabidopsis that binds to a TATA element." Biosci Biotech Biochem. (in press). (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 山口淳二: "Isolatio and characterization of nuclei from rice embryos." Cell Structure & Function. 17. 87-92 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] 椋本藤夫: "DNA sequence requirement of a TATA element-binding protein from Arabidopsis for transcription in vitro." Plant Mol Biol. 23. 995-1003 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 山口雄記: "Preparation of an in vitro Transcription System of Plant Origin,with Methods and Templates for Assessing Its Fiderity." Plant Mol Biol Manual. (印刷中). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 武田穣: "Bending of DNA in solution caused by a protein from Arabidopsis that binds to a TATA element." Biosci Biotech Biochem. (印刷中). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 山崎健一: "植物全能性の分子生物学(駒嶺穆 編) 試験管内転写系による植物転写因子の機能解析" 朝倉書店, 305 (1991)

    • Related Report
      1993 Annual Research Report
  • [Publications] 山崎健一: "蛋白質核酸酵素 植物遺伝子の転写装置とその調節機構" 共立出版, 372 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] 山崎 健一: "Accurate transcription of plant genes in vitro using a wheat germ chromation extract." Plant molecular Biology Reporter. 8(2). 114-123 (1990)

    • Related Report
      1992 Annual Research Report
  • [Publications] 山崎 健一: "TGAla,a tobacco DNAーbinding protein,increases the rate of initiation in a plant in vitro transcription system." Proceedings of National Academie of Science. 87. 7035-7039 (1990)

    • Related Report
      1992 Annual Research Report
  • [Publications] 片桐 文章: "A Plant DNAーbinding protein increases the number of active preinitiation complexes in a human in vitro transcription system." Genes&Developments. 4. 1899-1909 (1990)

    • Related Report
      1992 Annual Research Report
  • [Publications] 山口 雄記: "Preparation of an in vitro Transcription System of Plant Origin,with Methods and Templates for Assessing Its Fiderity." Plant Mol Biol Manual.

    • Related Report
      1992 Annual Research Report
  • [Publications] 山口 淳二: "Isolation and characterization of nuclei from rice embryos" Cell Struc.Func.17. 87-92 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Perata,Pierdomenico: "Effect of anoxia on starch breakdown in rice and wheat seeds" Planta. 188. 611-618 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 山崎 健一: "試験管内転写系による植物転写因子の機能解析,植物全能性の分子生物学" 朝倉書店, 305 (1991)

    • Related Report
      1992 Annual Research Report
  • [Publications] 山崎 健一: "植物遺伝子の転写装置とその調節機構,蛋白質核酸酵素臨時増刊号植物の分子生物学" 共立出版, 372 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 山崎 健一: "Selective and accurate initiation of transcription at the T-DNA promoter in a soluble chromatin extract from wheat germ." Molecular & General Genetics. 209. 445-452 (1987)

    • Related Report
      1991 Annual Research Report
  • [Publications] 山崎 健一: "Accurate transcription of plant genes in vitro using a wheat germ-chromatin extract." Plant Molecular Biology Reporter. 8(2). 114-123 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] 山崎 健一: "TGAla,a tobacco DNA-binding protein,increases the rate of initiation in a plant in vitro transcription system." Proceedings of Natinal Academie of Science. 87. 7035-7039 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] 片桐 文章: "A Plant DNA-binding protein increases the number of active preinitiation complexes in a human in vitro transcription system." Genes & Developments. 4. 1899-1909 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] 山崎 健一: "植物遺伝子のインビトロ転写法,植物細胞工学" 秀潤社, 88 (1990)

    • Related Report
      1991 Annual Research Report
  • [Publications] 山崎 健一: "試験管内転写系による植物転写因子の機能解析,植物全能性の分子生物学" 朝倉書店, 305 (1991)

    • Related Report
      1991 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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