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The construction of plasmids suitable for searching important rice genes.

Research Project

Project/Area Number 03556002
Research Category

Grant-in-Aid for Developmental Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Breeding science
Research InstitutionThe University of Tokyo (1992-1993)
Nagoya University (1991)

Principal Investigator

HIRAI Atsushi  Univ.Tokyo, Agriculture Professor, 農学部, 教授 (60023470)

Co-Investigator(Kenkyū-buntansha) ICHIKAWA Hiroaki  Natl.Inst.Agrobiol.Res.Researcher, 農業生物資源研究所, 農林水産技官
服部 一三  名古屋大学, 農学部, 助手 (40023494)
Project Period (FY) 1991 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥16,900,000 (Direct Cost: ¥16,900,000)
Fiscal Year 1993: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 1992: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 1991: ¥10,100,000 (Direct Cost: ¥10,100,000)
Keywordsrice / nuclear DNA / particle gun / mutation / mitochondrial DNA / nad9 / nad9 / 巨大DNA / パ-ティクルガン
Research Abstract

In order to clone unknown but agriculturally useful genes, we have constructed a plasmid suitable for transferred-DNA-mediated insertional mutagenesis. It has a 35S promoter and a chloramphenicol acetyl transferase gene which are active in plant cells, and a replication origin and a ampicillin resistant gene which are active in bacterial cells. We tried to transform this 7.6 kb long plasmid into rice culture cells by a particle gun, but we could not obtain transformants. The mitochondrial genomes of higher plants are much larger and more complex than those of other eukaryotic organisms. However, number of identified genes are limited. We speculated that mitochondrial DNA codes more active genes and searched unidentified important genes in rice mitochondrial DNA.First, we constructed a transcription map of the mitochondrial genome from rice. Then we determined nucleotide sequence the area in where the RNA is transcribed but genes are not identified. We found nad9, the gene for NADH dehydrogenase subunit 9, by this method.

Report

(4 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • 1991 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Honda,H.: "The gene for the α-subunit of ATPase:a site of homologous recombination in plant mitochondrial DNA also functions in somatic hybrid cells." Theor.Appl.Genet.84. 33-38 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Iwahashi,M.: "Genetic and physical maps and a clone bank of mitochondrial DNA from rice." Theor.Appl.Genet.84. 275-279 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hatano,S.: "The preparation of high-molecular-weight DNA from rice and its analysis by pulsed-field gel electrophoresis." Plant Science. 83. 55-64 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nakazono,M.: "Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice." Mol.Gen.Genet.236. 341-346 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Kanno,A.: "Variations in chloroplast DNA from rice(Oryza sativa)differences between deletions mediated by short direct-repeat sequences within a single species." Theor.Appl.Genet.86. 579-584 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nakazono,M.: "Palindromic repeated sequences(PRSs)in the mt genome of rice:evidence for their insertion after divergence of the genus Oryza from the other Gramineae." Plant Mol.Biol.(in press.).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Honda, H.: "The gene for the alpha-subunit of ATPase : a site of homologous recombination in plant mitochondrial DNA also functions in somatic hybrid cells." Theor.Appl.Genet.84. 33-38 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Iwahashi, M.: "Genetic and physical maps and a clone bank of mitochondrial DNA from rice." Theor.Appl.Genet.84. 275-279 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hatano, S.: "The preparation of high-molecular-weight DNA from rice and its analysis by pulsed-field gel electrophoresis." Plant Science. 83. 55-64 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nakazono, M.: "Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice." Mol.Gen.Genet.236. 341-346 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Kanno, A.: "Variations in chloroplast DNA from rice (Oryza sativa) differences between deletions mediated by short direct-repeat sequences within a single species." Theor.Appl.Genet.86. 579-584 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nakazono, M.: "Palindromic repeated sequences (PRSs) in the mt genome of rice : evidence for their insertion after divergence of the genus Oryza from the other Gramineae." Plant Mol.Biol.(in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nakazono,M.: "Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice." Mol.Gen.Genet.236. 341-346 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Kanno,A.: "Variations in chloroplast DNA from rice(Oryza sativa):differences between deletions mediated by short direct-repeat sequences within a single species." Theor.Appl.Genet.86. 579-584 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Kanazawa,A.: "Restriction fragments homologous to mitochondrial plasmid-like DNAs are located within limited chromosomal regions on the rice nuclear genome." Theor.Appl.Genet.87. 577-586 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Hirai,A.: "Six percent of the mitochondrial genome in rice came from chloroplast DNA." Plant Mol.Biol.Reporter. 11. 98-100 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Matsuoka,M.: "Expression of a rice homeobox gene causes altered morphology of transgenic plants." The Plant Cell. 5. 1039-1048 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nakazono,M.: "Palindromic repeated sequences(PRSs)in the mitochondrial genome of rice:evidence for their insertion after divergence of the genus Oryza from the other Gramineae." Plant Mol.Biol.(in press.).

    • Related Report
      1993 Annual Research Report
  • [Publications] Honda,H.: "The gene for the α-subunit of ATPase:a site of homologous recombination in plant mitochondrial DNA also functions in somatic hybrid cells." Theor.Appl.Genet.84. 33-38 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Iwahashi,: "Genetic and physical maps and a clone bank of mitochondrial DNA from rice." Theor.Appl.Genet.84. 275-279 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Hatano,S.: "The preparation of high-molecular-weight DNA from rice and its analysis by pulsed-field gel electrophoresis." Plant Science. 83. 55-64 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Kanno,A.: "A transcription map of the chloroplast genome from rice(Oryza sativa)." Curr.Genet.

    • Related Report
      1992 Annual Research Report
  • [Publications] Nakazono: "Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice." Mol.Gen.Genet.in press.

    • Related Report
      1992 Annual Research Report
  • [Publications] Kanno,A.,: "Variations in chloroplast DNA from rice(Oryza sativa)differences between deletions mediated by short direct-repeat sequences within a single species." Theor.Appl.Genet.

    • Related Report
      1992 Annual Research Report
  • [Publications] Hirai,A.:"Molecular structure of chloroplast DNA from rice." Biotechnology in Agriculture and Forestry(Rice). 14. 458-467 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Honda,H.,K.Itoh and A.Hirai:"The heterogeneous composition of mitochondrial DNA in somatic hybrid call and the relatively simple composition of such DNA in regenerated leaves." Jpn.J.Genet.66. 279-289 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] Kanno,A.and A.Hirai: "Comparative studies on the structure of chloroplast DNA from four species of Oryza: Cloning and physical map." Theor.Appl.Genet.

    • Related Report
      1991 Annual Research Report
  • [Publications] Honda,H.and A.Hirai: "The gene for the alpha-subunit of ATPase: a site of homologous recombination in plant mitochondrial DNA also functions in somatic hybrid cells." Theor.Appl.Genet.

    • Related Report
      1991 Annual Research Report
  • [Publications] Iwahashi,M.,M.Nakazono,A.Kanno,K.Sugino,T.Ishibashi and A.Hirai:"Genetic and physical maps and a clone bank of mitochondrial DNA from rice." Theor.Appl.Genet.

    • Related Report
      1991 Annual Research Report
  • [Publications] Hatano,S.J.Yamaguchi and A.Hirai: "The preparation of high-molecular-weight DNA from rice and its analysis by pulsed-field gel electrophoresis." Plant Sci.

    • Related Report
      1991 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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