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Molecular Mechanism on the Enzyme-catalyzed Acceleration

Research Project

Project/Area Number 03660081
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 応用生物化学・栄養化学
Research InstitutionKyoto Furitu University (The University of Kyoto Prefecture) (1992)
Kyoto University (1991)

Principal Investigator

OHNISHI Masatake  The University of Kyoto Prefecture, College of Agriculture, Department of Agricultural and Biological Chemistry, Associate Professor, 農学部, 助教授 (90026576)

Project Period (FY) 1991 – 1992
Project Status Completed (Fiscal Year 1992)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1992: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 1991: ¥1,200,000 (Direct Cost: ¥1,200,000)
KeywordsEnzyme Mechanism / Reaction Acceleration / Molecular Mechanism / Active Conformation / Enzyme Denaturation / Glucoamylase / State Transition / 酵素機能高揚 / 近赤外線照射 / 酵素分子 / 酵素触媒反応 / 反応加速機構
Research Abstract

In this research project, we proposed a hypothesis on the molecular mechanism of the enzyme-catalyzed acceleration, designated by the equation, E(] SY.dblharw.[)E* * E', where E is native state, E' is denaturated state, and E* is an intermediate. Rate equation of denaturation is represented as follows, v = k' [E*], where k' is rate constant. E* is supposed to be active, thus a problem is how to make clear it on the experiments. On the basis of the acceleration model, a substrate(S) is the decisive key to solve the problem ; rate of denaturation (v) is very dependent on the concentration of substrate [S] , when E* is active. However, the rate is independent on [S] , when E is active. In the experiments, a transition state analogue glucanolacton was used for S, because a substrate is catalyzed with the enzyme during observation of denaturation.
Denaturation of an enzyme glucoamylase from Rhizopus niveus, caused at 60゚C and pH 4.5, was observed by spectrophotometric procedures at 280nm. Rate of denaturation v was found to be dependent on [S] and a plot of DELTA v - [S] gives the dissociation constant of the gluconolatone-glucoamylase complex, Kd to be 3.8mM, which is nearly equal to the reported values (1.5 * 0.5mM). These findings suggest that E* is active form of the enzyme and E is a resting state for the enzyme-catalyzed activity.
We take notice on the near infrared(NIR), which is a useful strategy for specific transition of enzyme conformation, thus an apparatus of the NIR radiation was constructed using a halogen lamp unit and a spectromate, made of Shimadzu. Radiation effect on the acceleration is tested for alpha-amylase and tyrosinase.

Report

(3 results)
  • 1992 Annual Research Report   Final Research Report Summary
  • 1991 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] 大西 正健: "Substrate binding of Streptomyces xylose isomerase,Studied by fluorescence Spectrophotometry using xylose and xylitol" 澱粉科学. 38. 41-44 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 岩田 建: "Spectrophotometny on the change in conformation of bactertal alpha-amylase,Characterized with 6M uvea." Starch. 43. 280-283 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 大西 正健: "酵素反応測定技術の進歩" 日本醸造協会誌. 86. 494-499 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 大西 正健: "Effect of modification of tryptophan residues of cyclo=dextrin glucanotransferate with N-bromosuccinimide on the enzyme-catalyzed byelvolysis of Soluble Starch and cyclo wexcole." Canbohydr,Res.227. 285-291 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 大西 正健: "Quartanary Structure of xylose isomerase,Effects on binding of Substrates and analogues" Protein Sciences. (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 大西 正健: "Modification of tryptophan residues of cyclodextrin glucanotransfevase with N-bromosuccinimide on the formation of cycloamyloses from maltose as a sabstrate." Agric.Biol.Chem.(1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 大西 正健(共著): "酵素実験法1(大野,崎山,高橋編)" 広川書店, 415 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 大西 正健(共著): "ヒドロラーゼ(タンパク質化学第4巻)" 広川書店, 300 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: "Substrate binding of Streptomyces xylose isomerase, Studied by fluorescence spectrophotometry using xylose and xylitol." Denpun Kagaku. 38. 41-44 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Iwata, K.: "Spectrophotometry on the change in conformation of bacterial alpha-amylase, Characterized with 6M urea." Starch. 43(7). 280-283 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: "Recent techniques for enzyme-catalyzed reaction" Nippon Jozo Kyokaishi. 86(7). 494-499 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: "Studies on the molecular conformation and function of xylose isomerase---Relation of its quaternary structure with its catalytic activity and substrate binding." Denpun Kagaku. 38(3). 327 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: "Effect of modification of tryptophan residues of cyclodextrin glucanotransferase with N-bromosuccinimide on the enzyme-catalyzed hydrolysis of soluble starch and cyclomaltohexaose." Carbohydr. Res.227. 285-291 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: "An analysis of the molecular mechanism on reaction acceleration by enzymes." Nippon Nogeikagaku Kaishi. 66(8). 1305-1306 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: "Quartanary structure of xylose isomerase, Effects on the binding of substrates and analogues." Protein Sciences. (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: "CGTase-catalyzed production of cyclomaltooligosaccharides using maltose as a substrate ----- Effect of modification with NBS." Nippon Nogeikagaku Kaishi. 67(3). 365 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: Kodansha, Tokyo. What are Saccharides ? --- Search for a Mystery in Glycochain, which is a Key for Life., 1-196 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Ohnishi, M.: Hirokawa Shoten, Tokyo. Experimental Methods for Enzymes. Vol. 1, (eds. by Ohno, M., Sakiyama, F., and Takahashi, K.), 347-415 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] 大西 正健: "Effect of modification of tryptophan residues of Cyclo=dextrin glucanotransferale with N-bromosuccinimide on the enzyme-Catalyzed hydrolysis of Sduble Starch and cyclomalthexaose" Carbohydr.Res.227. 285-291 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 大西 正健: "酵素による反応加速の分子機構解析への試み-グルコアミラーゼに及ぼす熱因子効果の検討" 日本農芸化学会誌. 66. 1305-1306 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 大西 正健: "マルトースを基質とするCGTase環形成反応-NBS修飾効果の検討" 日本農芸化学会誌. 67. 365- (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] 大西 正健: "酵素反応加速の分子機構-触媒反応に及ぼす近赤外線照射及び加熱の効果" 澱粉科学. 40. (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] 大西 正健(共著): "酵素実験法1(大野,崎山,高橋編)" 広川書店, 415 (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] 大西 正健: "Substrate binding site of Streptomyces xylose isomerase,studied by the fluorecsence spectrophotometry using xylose and xylitol" 澱粉科学. 38. 41-44 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] 岩田 建: "Spectrophotometry on the change in conformation of bacterial alphaーamylase characterized with 6M Urea" Starch/Starke. 43. 280-283 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] 大西 正健: "酵素反応測定技術の進歩" 日本醸造協会誌. 86. 494-499 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] 大西 正健: "Xylose isomeraseの分子構造と機能に関する研究ー四次構成形成と触媒活性,基質取り込みとの関係" 澱粉科学. 38. 327 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] 大西 正健: "Effect of modification of tryptophan residue of Cyclodeーextrin glucanotransferase with Nーbromosuccinimide on the enzyme catalyzed hydrolysis of Soluble Starch and cyclomaltohexaose" Carbohydrate Research. (1992)

    • Related Report
      1991 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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