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Molecular Recognition and Signal Transduction in Antibodie

Research Project

Project/Area Number 03671024
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field Physical pharmacy
Research InstitutionUniversity of Tokyo

Principal Investigator

SHIMADA Ichio  University of Tokyo, Fac.Pharm.Scie., Associate Professor, 薬学部, 助教授 (70196476)

Project Period (FY) 1991 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1993: ¥200,000 (Direct Cost: ¥200,000)
Fiscal Year 1992: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1991: ¥1,500,000 (Direct Cost: ¥1,500,000)
KeywordsNMR / Antibodies / Recognition / Dynamics / Fv / 抗原認識 / タンパク-タンパク相互作用 / 動的立体構造 / タンパク・タンパク相互作用 / 安定同位体標式
Research Abstract

An isotope-edited nuclear magnetic resonance study is reported of the Fv fragment, which is the smallest antigen recognition unit composed of V_H and V_L domains. The Fv fragment has been obtained by clostripain digestion of a short-chain anti-dansyl mouse IgG2a monoclonal antibody. A variety of stable-isotope labeled anti-dansyl Fv analogues have been prepared. On the basis of stable isotope-aided heteronuclear and homonuclear two-dimensional NMR spectra, it has been concluded that 1) the dansylring is bound through Tyr-96H and Tyr-104H to both ends of H3 loop, the third hypervariable region of the heavy chain, 2) in the absence of DNS-Lys, the H3 loop displays a significant degree of internal motion and 3) binding of DNS-Lys induces a significant change in the dynamical structure of the H3 loop.

Report

(4 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • 1991 Annual Research Report
  • Research Products

    (21 results)

All Other

All Publications (21 results)

  • [Publications] K.Kato,et al.: "Complete Assignment of the Methioryl Carbory Carbon Resonances in Switch Variant Anti-Dangyl Antibodies Laheled" Biochemistry. 30. 270-278 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] H.Takahashi,et al.: "Preparation of Fv Fragment from a Short-Chain Mouse IgG2a Antidansyl Monoclonal Antibody and Use of Selective...." Biochemistry. 30. 2840-2847 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] H.Takahashi,et al.: "Multinuclear NMR Study of the Structure of the Fv fragment of Anti-Dansyl Mouse IgG2a Antibody" Biochemistry. 30. 6611-6619 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] K.Kato,et al.: "Carbon-13 NMR Study of Switch Variant Anti-Dansyl Antibodies:Antigen Binding and Domein-Domein Interaction" Biochemistry. 30. 6604-6610 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] J.I.Kim,et al.: "Conformation and Stereoselective Reduction of Hapten Side Chain in the Antibody Combining Site" J.Am.Chem.Soc.113. 9392-9394 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] H.Takahashi,et al.: "Dynamical Structure of the Antibody Combining Site As Studied by ^1H-^<15>N Shift Correlation NMR Spectroscopy" Biochemistry. 31. 2464-2468 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] H.Gouda,et al.: "Three-dimensional Solution Structure of the B Domein of Staphyrococal Protein A:Comparison of the Solution and Crystral Structures" Biochemistry. 31. 9665-9672 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] A.Odaka,et al.: "Isotope Edited Nuclear Magnetic Resonance Study of Fv Fragment of Anti-dansyl Mouse Monoclonal Antidody:Recognition of the Dougl〓taplu" Biochemistry. 31. 10686-10691 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Koichi Kato, Chigusa Matsunaga, Takako Igarashi, HaHyung Kim, Asano Odaka, Ichio Shimada, and Yoji Arata: "Complete Assignment of the Methionyl Carbonyl Carbon Resonances in Switch Variant Anti-Dansyl Antibodies Labeled with [1-^<13>C]Methionine" Biochemistry. 30. 270-278 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hideo Takahashi, Takako Igarashi, Ichio Shimada, and Yoji Arata: "Preparation of Fv Fragment from a Short-Chain Mouse IgG2a Antidansyl Monoclonal Antibody and Use of Selectively Deuterated Fv Analogue for Two-dimensional ^1H NMR Analyzes of the Antigen-Antibody Interactions" Biochemistry. 30. 2840-2847 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hideo Takahashi, Asano Odaka, Shunro Kawaminami, Chigusa Matsunaga, Koichi Kato, Ichio Shimada, and Yoji Arata: "Multinuclear NMR Study of the Structure of the Fv Fragment of Anti-Dansyl Mouse IgG2a Antibody" Biochemistry. 30. 6611-6619 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Koichi Kato, Chigusa Matsunaga, Asano Odaka, Wakana Takaha, Ichio Shimada, and Yoji Arata: "Carbon-13 NMR Study of Switch Variant Anti-Dansyl Antibodies : Antigen Binding and Domain-Domain Interactions" Biochemistry. 30. 6604-6610 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Jae Il Kim, Tetsuo Nagano, Tsunehiko Higuchi, Masaaki Hirobe, Ichio Shimada, and Yoji Arata: "Conformation and Stereoselective Reduction of Hapten Side Chain in the Antibody Combining Site" J.Am.Chem.Soc.113. 9392-9394 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hideo Takahashi, Erika Suzuki, Ichio Shimada, and Yoji Arata: "Dynamical Structure of the Antibody Combining Site As Studied by ^1H-^<15>N Shift Correlation NMR Spectroscopy" Biochemistry. 31. 2464-2468 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hiroaki Gouda, Hidetaka Torigoe, Akiko Saito, Moriyuki Sato, Yoji Arata, and Ichio Shimada: "Three-dimensional Solution Structure of the B Domain of Staphylococcal Protein A : Comparison of the Solution and Crystal Structures" Biochemistry. 31. 9665-9672 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Asano Odaka, Jae Il Kim, Hideo Takahashi, Ichio Shimada, and Yoji Arata: "Isotope-Edited Nuclear Magnetic Resonance Study of Fv Fragment of Anti-dansyl Mouse Monoclonal Antibody : Recognition of the Dansyl Hapten" Biochemistry. 31. 10686-10691 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] T.Nakyama,et al: "A.Multinuclear NMR Study of the Affinity Maturation of Anti-NP MMA" Biochemistry. 32. 13961-13962 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] H.Iwai et.al.: "Solution conformation of an ourtibacterial peptide,sarcotoxin IA." Eur.J.Biochem.217. 639-644 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Asano Odaka et al.: "Isotope-Edited Nuclear Magnetic Resonance Study of Fu fuagmet of Anti-Dansyl Mouse Monoclonal Anticbody" Biochemistry. 31. 10686-10691 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Hiroaki Gouda et al.: "Three-Dimensional Solutian Structure of the B Domain of Staphylococcal ProteinA" Biochemistry. 31. 9665-9672 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] H.Takahashi: "Dynamical structure of the antibody combiniy site as studied by ^1Hー ^<15>N shift correlation NMR spectroscopy" Biochemistry. (1992)

    • Related Report
      1991 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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