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Molecular assembly of Limulus polyphemus hemocyanin by using small angle X-ray scattering

Research Project

Project/Area Number 03680232
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 生物物性学
Research InstitutionDOKKYO UNIVERSITY SCHOOL OF MEDICINE

Principal Investigator

IGARASHI Yoshihiko (1992)  DOKKYO UIV.SCH.MED. BIOCHEMISTRY ASSISTANT PROFESSOR, 医学部, 助教授 (50049235)

梶田 昭彦 (1991)  獨協医科大学, 医学部, 教授 (80049113)

Co-Investigator(Kenkyū-buntansha) ICHIMURA Kaoru  DOKKYO UIV.SCH.MED. BIOCHEMISTRY ASSISTANT, 医学部, 助手 (40213011)
KIMURA Kazumoto  DOKKYO UIV.SCH.MED.MED. ELECTRONICS RESERCHER, 医学部, 研究員 (30049241)
KIHARA Hiroshi  JICHI MED.SCH.SCH.NURSING PHYSICS PROFESSOR, 物理・教庭, 教授 (20049076)
KAJITA Akihiko  DOKKYO UIV.SCH.MED. BIOCHEMISTRY HONORABLE PROFESSOR, 医学部, 名誉教授 (80049113)
五十嵐 吉彦  獨協医科大学, 医学部, 助教授 (50049235)
Project Period (FY) 1991 – 1992
Project Status Completed (Fiscal Year 1992)
Budget Amount *help
¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1992: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1991: ¥1,200,000 (Direct Cost: ¥1,200,000)
KeywordsHEMOCYANIN / PANULIRUS JAPONICUS / PROCAMBARUS CLARKI / MACROCHEIRA KAEMPFERI / LIMULUS POLYPHEMUS / SUBUNIT ASSEMBLY / SUBMULTIPLE / SMALL ANGLE X-RAY SCATTERING / Macrocheira Kaempferi / Linulus polyphemus / イセエビ / カブトガニ / X線小角散乱法 / multiーsphere model / 距離分布関数 / submultiple / subunit
Research Abstract

Structures in a solution of giant molecules which can not been analyzed by X-ray crystallography were evaluated successfully by using small angle X-ray scattering (SAXS). In 1991, we analyzed the hexameric structure of Panulirus japonicus hemocyanin and compared its scattering pattern with 1) - 3) models.
type 1 : a large sphere model : hexamers (submultiples) are regarded as one sphere.
type 2 : a small sphere model : subunits are regarded as one sphere. The submultiple consists of 6 spheres. The configuration of each subunit was followed by X-ray crystallography.
type 3 : an atomic coordinates model : alpha carbon coordinates are the center of small beads as shown in P. interuputus Hc by X-ray crystallographic analysis. The configuration of each subunit was the same as type 2 model.
The results show that the scattering pattern of type 3 model fits the experimental data better than other two models. Thus, the structure in the solution of the P. japonicus Hc was shown to be quite similar to that of Hc in crystal. In 1992, we applied SAXS to 12-mer Hc which has never been evaluated by X-ray crystallography because this Hc is too large to be analyzed by this method. We used three 12-mer Hcs ; Limulus polyphemus (class : Merostomata), Procambarus clarki and Macrocheira Kaempferi (class : Crustacea). On the assumption that the submultiple structure of those Hc was the same as that of P. interuputus, we calculated the scattering patterns of assembly of submultiples using following models.
type a : One submultiple is put on the other. (Two submultiples coincided with 3-fold axis.)
type b : One side of submultiple is contacted with each other.
In conclusion, the structure of Merostomata 12-mer Hc was of type b model and that of Crustacea Hcs of type a model. We demonstrated clearly there was a large difference in the assembly manner of submultiples between the two classes of arthropodan Hc.

Report

(3 results)
  • 1992 Annual Research Report   Final Research Report Summary
  • 1991 Annual Research Report
  • Research Products

    (16 results)

All Other

All Publications (16 results)

  • [Publications] K.Kimura,Y.Igarashi et al.: "Kinetic study on the dissociation of Limulus polyphemus hemocyanin with the solution X-ray scattering." Photon Factory Activity Report. 8. 300 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura,Y.Igarashi et al.: "Dissociation of Limulus polyphemus(horseshoe crab)hemocyanin.I.Solution X-ray scattering study in equilibrium." Biophysical Chemistry. 38. 23-32 (1990)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura,Y.Igarashi et al.: "Dissociation of Limulus polyphemus(horseshoe crab)hemocyanin.II.Stopped-flow X-ray scattering study." Biophysical Chemistry. 43. 73-80 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Y.Igarashi,K.Kimura,et al.: "Study on the structure of spiny lobster(Panulirus japonics)hemocyanin with solution X-ray scattering." Photon Factory Activity Report. 9. 257 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura,Y.Igarashi,et al.: "Solution X-ray scattering studies on the dodecamers of arthropodan hemocyanin" Photon Factory Activity Report. 10. (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura,Y.Igarashi,A.Kajita,Z.-X.Wang,H.Tsuruta,Y.Amemiya et al.: "Structure and Function of Invertebrate Oxygen Carriers(Eds by S.N.Vinogradov and O.G.Kapp)" Springer-Verlag,Berlin, 10 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura, Y.Igarashi, A.Kajita, Z.-X. Wang, H.Tsuruta, Y.Amemiya and H.Kihara: "Static and Kinetic Studies on the Dissociation of Limulus polyphemushemocyanin with Solution X-ray Scattering" Structure and Function of Invertebrate Oxygen Carriers, Ed. S.N. Vinogradov and O.H.Kapp. Springer-Verlag, Berlin. 9-18 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] Y.Igarashi, K.Kimura, K.Ichimura, S.Makino, H.Tsuruta, Y.Amemiya, H.Kihara and A.kajita: "Studies on the structure of spiny lobster (Panulirus japonicus) hemocyanin with solution X-ray scattering" Photon Factory Activity. Report #9. 257 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura, Y.Igarashi, H.Tsuruta, H.Kihara and A.Kajita: "Dissociation of Limulus polyphemus (horseshoe crab) hemocyanin. II. Stopped-flow X-ray scattering study" Biophysical Chemistry. 43(1). 73-80 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura, Y.Igarashi, K.Ichimura, A.Kajita, Y.Amemiya and H.Kihara: "Solution X-ray scattering studies on the dodecamers of arthropodan hemocyanin" Photon Factory Activity. Report #10. (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1992 Final Research Report Summary
  • [Publications] K.Kimura,Y.Igarashi,et al.: "Dissociation of Limulus polyhemus(horseshoe crab)hemocyanin.2.Stopped-flow X-ray scattering study." Biophysical Chemistry. 43. 73-89 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Y.Igarashi,K.Kimura,H.Kihara,et al.: "Study on the structure of spiny lobster(Panulirus japonics)hemocyanin with solution X-ray scatering." Photon Factory Activity Report. 9. 257- (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Kimura,Y.Igarashi,H.Kihara,et al.: "Solution X-ray scattering studies on the dodecamers of arthropodan hemocyanin." Photon Factory Activity Report. 10. (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] 木村 一元,五十嵐 吉彦,木原 裕,梶田 昭彦 他: "Dissociation of Limulus polyphemus(horseshoe crab)hemocyanin.II.Stoppedーflow Xーray scattering study" Biophysical Chemistry,in press.

    • Related Report
      1991 Annual Research Report
  • [Publications] 五十嵐 吉彦,木村 一元,木原 裕,梶田 昭彦 他: "Studies on the structure of spiny lobster (Panulirus japonicus)hemocyanin with solution Xーray scattering" Photon Factory Activity Report (National Laboratory for High Energy Physics),.

    • Related Report
      1991 Annual Research Report
  • [Publications] 木村 一元,五十嵐 吉彦,梶田 昭彦,木原 裕 他: "Structure and Function of Invertebrate Oxygen Carriers (Ed.by S.Vinogradov & O.Kapp) Static and Kinetic studies on the dissociation of Limulus polyphemus hemocyanin with solution Xーray scattering" SpringerーVerlag,New York,9-18 (1991)

    • Related Report
      1991 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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