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Investigation on dual PCR technique and its application to sex determination of forensic specimens

Research Project

Project/Area Number 03807035
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field Legal medicine
Research InstitutionShimane Medical University

Principal Investigator

MATSUBARA Kazuo (1992-1993)  Shimane Medical University, School of Medicine, Associate Professor, 医学部, 助教授 (20127533)

塩野 寛 (1991)  島根医科大学, 医学部, 教授 (20112451)

Co-Investigator(Kenkyū-buntansha) SHIONO Hiroshi  Asahikawa Medical College, School of Medicine, Professor, 医学部, 教授 (20112451)
AKANE Atsushi  Shimane Medical University, School of Medicine, Instructor, 医学部, 助手 (70202520)
TAKAHASHI Setsunori  Shimane Medical University, School of Medicine, Instructor, 医学部, 助手 (90032226)
KIMURA Kojiro  Shimane Medical University, School of Medicine, Professor, 医学部, 教授 (30153191)
松原 和夫  島根医科大学, 医学部, 助教授 (20127533)
Project Period (FY) 1991 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥1,900,000 (Direct Cost: ¥1,900,000)
Fiscal Year 1993: ¥300,000 (Direct Cost: ¥300,000)
Fiscal Year 1992: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1991: ¥1,200,000 (Direct Cost: ¥1,200,000)
KeywordsDNA analysis / Sex determination / Polymerase chain reaction / Sex chromosomes / Amelogenin gene / Degradation of DNA / Hemoglobin / Hematin / DNA分解 / ポリメレ-ス・チェイン・リアクション(PCR)法 / DYZ1 / 縦列型反復配列遺伝子 / 単一コピ-遺伝子
Research Abstract

Sex determination by PCR amplification of X-Y homelogous amelogenin gene is quite informative since amplified X gene acts as an internal control. However, more than 250 ng templates are required to amplify single-copy amelogenin gene. By dual PCR amplification method, the gene was amplifiable from only 5 pg pure template DNA, but no PCR product was detected from contaminated and/or degraded forensic specimens.
When high molecular weight templates were recovered from such degraded samples by electroelution method, amelogenin gene was amplifiable by dual PCR method. The contaminant was identifide as the metabolite of hemoglobin like hematin, because pyridine hemochromogen analysis of the contaminant revealed the heme-specific absorbance. Furthermore, spectrophotometric and electrophoretic properties and inhibition ability of PCR indicated that the contaminant should be the proteinase K-digest of heme and some serum protein complex.
This contaminant and degraded DNA fragments were removable by Bio-Gel A-150m column chromatography. Following purification by the gel filtration, sexing was thus possible from such contaminatede and degraded forensic DNA samples.

Report

(4 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • 1991 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] 塩野 寛: "DNA分析による法医学試料の性別判定-Polymerase chain reaction(PCR)法の法医学的応用と問題点の検討" 最新医学. 46. 122-133 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Sex identification of forensic specimens by PCR:Two alternative methods" Forensic Science International. 49. 81-88 (1991)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Sex determination of forensic samples by dual PCR amplification of an X-Y homologous gene" Forensic Science International. 52. 143-148 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Purification of forensic specimens for the PCR analysis" Journal of Forensic Sciences. 38. 691-701 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Identification of the heme compound copurifide with DNA from bloodstains,a major inhibitor of PCR amplification" Journal of Forensic Sciences. 39. 362-372 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Purification of highly degraded DNA by gel filtration for PCR" BioTechniques. 16. 235-238 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 赤根 敦(三澤章吾・原田勝二編): "DNA多型研究の新しい展開、Vol.1 -法医学試料中汚染・損壊DNAのPCR分析-" 文光堂, 5 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Hiroshi Shiono: "A review of the sex determination of forensic specimens by DNA analysis : Application of the polymerase chain reaction (PCR) technique" Saishin Igaku. Vol.46. 122-133 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Sex identification of forensic specimens by PCR : Two alternative methods" Forensic Science International. Vol.49. 81-88 (1991)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Sex identification of forensic specimens by dual PCR amplification of an X-Y homologous gene" Forensic Science International. Vol.52. 143-148 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Purification of forensic specimens for the PCR analysis" Journal Forensic Sciences. Vol.38. 691-701 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atushi Akane: "Identification of the heme compound copurified with DNA from bloodstains, a major inhibitor of PCR amplification" Journal Forensic Sciences. Vol.39. 362-372 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Purification of highly degraded DNA by gel filtration for PCR" BioTechniques. Vol.16. 235-238 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Polymerase chain reaction analysis of contaminated and degraded DNA from forensic specimens" In : S.Misawa and S.Harada, eds.DNA polymorphism. Vol.1 Bunkodo, Tokyo. 31-35 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Atsushi Akane: "Purification of forensic specimens for the PCR analysis" Journal of Forensic Sciences. 38. 691-701 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Atsushi Akane: "Identification of the heme compound copurified with DNA from bloodstains,a major inhibitor of PCR amplification" Journal of Forensic Sciences. 39. 362-372 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Atsushi Akane: "Purification of highly degraded DNA by gel filtration for PCR" BioTechniques. 16. 235-238 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 赤根敦 (三澤章吾・原田勝二編): "DNA多型研究の新しい展開、Vol.1-法医学試料中汚染・損壊DNAのPCR分析-" 文光堂, 5 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 塩野 寛: "DNA分析による法医学試料の性別判定-Polymerase chain reaction(PCR)法の法医学的応用と問題点の検討" 最新医学. 46. 122-133 (1991)

    • Related Report
      1992 Annual Research Report
  • [Publications] ATSUSHI AKANE: "SEX DETERMINATION OF FORENSIC SAMPLES BY DUAL PCR AMPLIFICATION OF AN X-Y HOMOLOGOUS GENE" FORENSCIS SCIENCE INTERNATIONAL. 52. 143-148 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] ATSUSHI AKANE: "PURIFICATION OF FORENSIC SPECIMENS FOR THE POLYMERASE CHAIN REACTION (PCR) ANALYSIS" JOURNAL OF FORENSIC SCIENCES. 38. 691-701 (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] 塩野 寛: "DNA分析による法医学試料の性別判定ーPloymerase chain reaction(PCR)法の法医学的応用と問題点の検討" 最新医学. 46. 122-133 (1991)

    • Related Report
      1991 Annual Research Report
  • [Publications] ATSUSHI AKANE: "SEX DETERMINATION OF FORENSIC SAMPLES BY DUAL PCR AMPLIFICATION OF AN XーY HOMOLOGOUS GENE" Forensic Science International. 52. 143-148 (1992)

    • Related Report
      1991 Annual Research Report

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Published: 1991-04-01   Modified: 2016-04-21  

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