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Studies on Structures and Specific Functions in Bioinoganic Chemistry

Research Project

Project/Area Number 04225101
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Research InstitutionNagoya University

Principal Investigator

YAMAUCHI Osamu  Nagoya University, Faculty of Science.Professor, 理学部, 教授 (70029643)

Co-Investigator(Kenkyū-buntansha) SUZUKI Shinichiro  Osaka University, Faculty of Science.Professor, 理学部, 教授 (70116052)
TANAKA Koji  Okazaki National Research Institutes, Institute for Molecular Science.Professor, 分子科学研究所, 教授 (00029274)
KITAGAWA Teizo  Okazaki National Research Institutes, Institute for Molecular Science.Professor, 分子科学研究所, 教授 (40029955)
MORISHIMA Isao  Kyoto University, Faculty of Engineering.Professor, 工学研究科, 教授 (50026093)
Project Period (FY) 1994
Project Status Completed (Fiscal Year 1994)
Budget Amount *help
¥32,900,000 (Direct Cost: ¥32,900,000)
Fiscal Year 1994: ¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 1993: ¥19,200,000 (Direct Cost: ¥19,200,000)
Fiscal Year 1992: ¥10,700,000 (Direct Cost: ¥10,700,000)
KeywordsBiological metal complex / Multiple interaction / Biological reaction process / Metalloenzyme model / Molecular recognition system / Oxygen carrier / Election transfer pathway / 人工変異タンパク質 / 国際シンポジウム / DNA塩基認識 / 銅酵素 / 人工変異ヘムタンパク質 / 光合成系マンガン錯体 / 二酸化炭素固定
Research Abstract

The studies on the priority area of "Bioinorganic Chemistry" were carried out for three years with a view to elucidating the structures and specific functions of transition metal ions in biological systems. The following points were intensely pursued :
(i) Multiple interactions between biomolecules around the central metal ion
(ii) Regulation of biological reaction processes
(iii) Precise modeling of biological reactions
(iv) Construction of new chemical systems
The results of the above studies have now been reviewed and summarized to give a clear view on biological reaction mechanisms involving metal ions. They afforded chemical systems which closely mimic the structures and functions of biological metal complexes such as the copper-containing active site of hemocyanin. This research project depended much on the cooperation between scientists from various fields including chemistry, biology, and molecular biology, without which it has not been possible to investigate the metal-containing biological systems at the molecular level. Prior to the 30th International Conference on Coordination Chemistry (ICCC), we held a symposium on bioinorganic chemisrty, in which a number of former and present project team members published their research activities. We prepared a collective report on the whole activities of the research project during the period 1991-1994. The results of the present study will deepen our understanding of the biological functions of metal ions and ultimately of the life phenomena.

Report

(4 results)
  • 1994 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • 1992 Annual Research Report
  • Research Products

    (66 results)

All Other

All Publications (66 results)

  • [Publications] M. Unno, K. Ishimori, Y. Ishimura and I. Morishima: "High Pressure Flash Photolysis Study of Hemoproteins: Effects of Substrate Analogues on the Recombination of Carbon Monoxide to Cytochrome P450cam." Biochemistry. 33. 9762-9768 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] S. Nakashima and T. Kitagawa: "Recombination Intermediates of Photodissociated CO Myoglobin at Ambient Temperatures Detected by Time-Resolved Resonance Raman Spectroscopy." J. Am. Chem. Soc.116. 10318-10319 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] L.Lomozik, A. Odani and O. Yamauchi: "Spectroscopic Studies on Complex Formation and Noncovalent Interactions in Ternary Palladium(II) Systems Involving Spermidine and 2,3-Diaminopropionate or 2,4-diaminobutyrate." Inorg. Chim. Acta. 219. 107-114 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] O. Yamauchi: "Amino Acid-and Pterin-Metal Chemistry as an Approach to Biological Functions." Pure Appl. Chem.67. 297-304 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] N. Komeda, H. Nagano, Y. Kushi, G. Adachi, M. Suzuki,A. Uehara and K. Tanaka: "Molecular Structures of Nitro-and Nitrito-Copper Intermediates in Electrochemical Reduction of Nitrite to Nitrous Oxide." Bulletin of Chemical Society of Japan. 68. 581-589 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] K. Tanaka: "Carbon Dioxide Fixation by Catalysed by Metal Complexes." Advances of Inorganic Chemistry. (in Press). (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Unnno, K.Ishimori, Y.Ishimura and I.Morishima: "High Pressure Flash Photolysis Study of Hemoproteins : Effects of Substrate Analogues on the Recombination of Carbon Monoxide to Cytochrome P450cam." Biochemistry. 33. 9762-9768 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] S.Nakashima and T.Kitagawa: "Recombination Intermediates of Photodissociated CO Myoglobin at Ambient Temperatures Detected by Time-Resolved Resonance Raman Spectroscopy" J.Am.Chem.Soc.116. 10318-10319 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] L.Lomozik, A.Odani and O.Yamauchi: "Spectroscopic Studies on Complex Formation and Noncovalent Interactions in Ternary Palladium (II) Systems Involving Spermidine and 2,3-Diaminopropionate or 2,4-diaminobutyrate" Inorg.Chim.Acta. 219. 107-114 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] O.Yamauchi: "Amino Acid-and Pterin-Metal Chemistry as an Approach to Biological Functions" Pure Appl.Chem.67. 297-304 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] N.Komeda, H.Nagao, Y.Kushi, G.Adachi, M.Suzuki, A.Uehara and K.Tanaka: "Molecular Structures of Nitro- and Nitrito-Copper Intermediates in Electrochemical Reduction of Nitrite to Nitrous Oxide." Bulletin of Chemical Society of Japan. 68. 581-589 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] K.Tanaka: "Carbon Dioxide Fixation by Catalysed by MEtal Complexes." Advances of Inorganic Chemistry. (in press). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Sugimori: "Structures and Properties of Temary Copper(II)Complexes Involving a Halogen Substituted Phenylalanine and 2,2'-Bipyridine.Intermolecular Interactions Between Halo and Organic Groups." Bull.Chem.Soc.Jpn.67. 131-137 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] L.Lomozik: "Spectroscopic Studies on Complex Formation and Noncovalent Interactions in Ternary Palladium(II)Systems Involving Spermidine and 2,3-Diaminopropionate or 2,4-diaminobutyrate." Inorg.Chim.Acta.219. 107-114 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] H.Nagano: "Carbon-Carbon Bond Formation in Electrochemical Reduction of Carbon Dioxide Catalyzed by a Ruthenium Complex." Inorg.Chem.33. 3415-3420 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] C.Dennison: "Proton Nuclear Magnetic Resonance Assignments and the Electron Self-exchange Rate Constant for Pseudoazurin from Achromobacter cycloclasters." J.Chem.Soc.Dalton Trans.437-443 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] C.Dennison: "Reactivity of Pseudoazurin from Achromobacter cycloclastes with Inorganic Redox Partners and Related NMR and Electrochemical Studies." Inorg.Chem.33. 3299-3305 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] S.Ozawa: "NMR Studies of π-Cation Radical Complexes of Iron(III)and Oxoiron (IV)Chlorins.Models for Reaction Intermediates of Chlorin-Containing Heme Enzymes." J.Am.Chem.Soc.116. 5832-5838 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] K.Wakasugi: "“Module"Substitution in Hemoglobin Subunits:Preparation and Characterization of a Chimera β α-Subunit." J.Biol.Chem.269. 18750-18756 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] M.Unno: "High Pressure Flash Photolysis study of Hemoproteins:Effects of Substrate Analogues on the Recombination of Carbon Monoxide to Cytochrome P450cam." Biochemistry. 33. 9762-9768 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] S.Kaminaka: "Sequential Changes of the Fe-Histidine Bond upon Ligand Binding to Hemoglobin:Resonance Raman Study of α,α-Cross-linked Co-Fe Hybrid Hemoglobins." J.Am.Chem.Soc.116. 1683-1689 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Y.Mizutani: "Resonance Raman Characterization of Iron (III) Porphyrin N-Oxide:Evidence for an Fe-O-N Bridged Structure." J.Am.Chem.Soc.116. 3439-3441 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] S.Hirota: "Vibrational Assignments of the FeCO Unit of CO-Bound Heme Proteins Revisited:Observation of a New CO-Isotope-Sensitive Raman Band Assignable to the FeCO Bending Fundamental." J.Phys.Chem.98. 6652-6660 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] O.Yamauchi: "Amino Acid-and Pterin-Metal Chemistry as an Approach to Biological Functions." Pure Appl.Chem.67. 297-304 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] H.Masuda: "Structures and Stabilities of Ternary Copper(II)Complexes Containing an Acidic and a Basic Amino Acid.Evidence for Arginine Side Chain Involvement in Intermolecular Interactions and Its Biological Implication" Inorg.Chem.32. 1111-1118 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Osamu Yamauchi: "Ternary Metal(II)Complexes with Tyrosine-Containing Dipeptides.Structures of Copper(II)and Palladium(II)Complexes Involving L-Tyrosylglycine and Stabilization of Copper(II)Complexes Due to Intramolecular Aromatic Ring Stacking." Inorg.Chem.32. 4951-4959 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Akira Odani: "Structures and Properties of Ternary Copper(II)Complexes Involving a Halogen Substituted Phenylalanine and 2,2'-Bipyridine.Intermolecular Interactions between Halo and Organic Groups." Bull.Chem.Soc.Jpn.67. 131-137 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Akira Odani: "Spectroscopic Evidence for the Redox Reaction between Copper(II)and a Pterin Cofactor Model,6,7-Dimethyl-5,6,7,8-tetrahydropterin." Chem.Lett.385-388 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] L.Lomozik: "Spectroscopic studies on complex formation and noncovalent interactions in ternary palladium(II)systems involving spermidine and 2,3-diaminopropionate of 2,4-diaminobutyrate." Inorg.Chim.Acta. 219. 107-114 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] S.Ozawa: "Spectroscopic Characterization of Peroxo-Iron(III)Chlorin Complexes.The First Model for a Reaction Intermediate of Cytochrome d." Inorg.Chem.33. 306-313 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Konno: "Transition State of an Unfolding Step in Human Cyanomet Myoglobin." Biochim.Biophys.Acta. 1162. 93-98 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] A.Togi: "Effects of Intra and Intersubunit Hydrogen Bonds on the R-T Transition in Hunman Hemoglobin As Studied with α42(C7)and β145(HC2)Mutations." Biochemistry. 32. 10165-10169 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] M.Hisamoto: "Site-Directed Mutagenesis in Hemoglobin:Functional and Structural Study of the Intersubunit Hydrogen Bond of Threonine-38(C3)α at the α1-β2 Interface in Human Hemoglobin." Biochemistry. 32. 13688-13695 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] S.Ozawa: "Spectroscopic Characterization of Peroxo-Iron(III)Chlorin Complexes.The First Model for a Reaction Intermediate of Cytochrome d." Inorg.Chem.33. 306-313 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] S.Ozawa: "Preparation and Characterization of Oxoiron(IV)Chlorin Complexes as the First Models for a Reaction Intermediate in the Catalytic Cycle of Cytochrome d." J.Am.Chem.Soc.116. 634-641 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] K.Ishimori: "Site-Directed Mutagenesis in Hemoglobin:Functional and Structural Role of Penultimate Tyrosine." Biochemistry. 33(in press). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Inoue: "Crystallization and Preliminary X-ray Studies on Pseudoazurin from Achromobacter cycloclastes IAM 1013." J.Biochem.114. 761-762 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Kohzuma: "Direct Electrochemistry of Copper-Containing Nitrite Reductase from Achromobacter xylosoxidans NCIB 11015." Chem.Lett.12. 2029-2032 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] S.Itoh: "Pysicochemical Properties of 2-Methylthio-4-methylphenol,a Model Compound of the Novel Cofactor of Galactose Oxidase." Chem.Lett.12. 2099-2102 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] N.Nakamura: "Structure of a Tripotassium Pyrroloquinoline Quinone Salt." Acta Cryst.2093-2095 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Y.Nakao: "Preparation and Properties of the Dinuclear Copper(II)Complexes Bridged by an Alkoxo and an Exogenous Bridging Ligand." Bull.Chem.Soc.Jpn.67. 260-262 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Kohzuma: "Direct Electrochemistry of Nitrite Reductase from Achromobacter cycloclastes IAM 1013." Bull.Chem.Soc.Jpn.138-143 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Ogura: "Time-Resolved Resonance Raman Elucidation of the Pathway for Dioxygen Reduction by Cytochrome c Oxidase." J.Am.Chem.Soc.115. 8527-8536 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] K.D.Karlin: "Bioinorganic Chemistry of Copper" Copper(II)-Pteridine Chemistry.Structures,Properties,and Phenylalanine Hydroxylase Models., (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] K.D.Karlin: "Bioinorganic Chemistry of Copper" Copper(II)-Pteridine Chemistry.Structures,Properties,and Phenylalanine Hydroxylase Models., (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Hideki Masuda: "Copper(II)-Thioether Bonding in Multidentate N,S-Donor Ligand Complexes.Structural Dependence of the Chemical Properties of the Copper(II) Complexes of 1,5-Bis(2-pyridylmethylamino)-3-thiapentane and 2,6-Bis-(2,6-dithiaheptyl)pyridine" Bull.Chem.Soc.Jpn.65. 786-793 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Osamu Yamauchi: "Weak Interactions in Metal Complexes of Amino Acids with a Phosphorylated Side Chain.Conversion of Aromatic Ring Stacking to Electrostatic Bonding by Tyrosine Phosphorylation." Inorg.Chim.Acta. 198-200. 749-761 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Osamu Yamauchi: "Copper-Pteridine Chemistry.Structures,Solution Equilibria,and Redox Reactions" J.Inorg.Biochem.47. 40- (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Akira Odani: "Pteridine-Containing Ternary and Quaternary Complexes as Models for Metalloenzyme-Pterin Cofactor-Substrate Association Structure of Ternary Copper(II)-2,2'-Bipyridine-Lumazine Complex and Successful Equilibrium Study of a Quaternary Copper(II)System" J.Am.Chem.Soc.114. 6294-6300 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Hideki Masuda: "Structures and Stabilities of Ternary Copper(II)Complexes Containing an Acidic and a Basic Amino Acid.Evidence for Arginine Side Chain Involve-ment in Intermolecular Interactions and Its Biological Implication" Inorg.Chem.32. (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] S.Ozawa: "NMR Studeis of Iron(II) Nitrosyl π-Cation Radicals of Octaethylchlorin and Octaethylisobacteriochlorin as Models for Reaction Intermediate of Nitrite Reductase" J.Am.Chem.Soc.114. 1548 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Ishimori: "SiteDircted Mutagenesis in Hemoglobin: Functional and Structural Role of Inter-and Intrasubunit Hydrogen Bonds As Studied With 37β Mutations" Biochemistry. 31. 3256 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Ishimori: "Sturcture and Ligand Binding Properties of Leucine 29(B10) Mutants of Human Myoglobin" Biochemistry. 267. 12614 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Yamaguchi: "Push Effects on the Heterolytic O-O Bond Cleavage of Peroxoiron(III) Porphyrin Adducts" Inorg.Chem.31. 156 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Yamaguchi: "Low-Valent Iron Porphyrins.NMR Evidence for π-Anion-Radical Character in Two-Electron-Reduced Iron(III) Meso-or β-Pyrrole-Substituted Porphyrins" Inorg.Chem.31. 3216 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] S.Sato: "Time-Resolved Resonance Raman Spectra of Free-Bace Octaethylporphyrin in the S_1 and T_1 States" Chem.Phys.Lett.189. 443-447 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] N.Kitajima: "A New Model for Dioxygen Binding in Hemocyanin.Synthesis,Characterization,and Molecular Structrue of the μ-η^2:η^2 Peroxo Dinuclear Copper(II) Complexes,[Cu(HB(3,5-R_2pz)_3)]_2(O_2)(R=iPr and Ph)" J.Am.Chem.Soc.114. 1227-1291 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] S.Kaminaka: "Time-Resolved UV Resonance Raman Study on Bohr Effects of Hemoglobin" J.Am.Chem.Soc.114. 3256-3260 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Ishimori: "Site Dircted Mutagenesis in Hemoglobin: Functional and Structural Role of Inter-and Intrasubunit Hydrogen Bonds as Studied With 37β and 145β Mutations" Biochemistry. 31. 3256-3265 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] N.Komeda: "Electrochemical Carbon Dioxide Fixation to Thioesters Catalyzed by [Mo_2Fe_6S_8(SEt)_9]^<3->" J.Am.Chem.Soc.114. 3625-3630 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] H.Tanaka: "Synthesis and Characterization of Bis (2,2'-bipyridyl) Nitro-Corbonylruthenium(II)Hexafluorophosphate" Inorg.Chem.31. 1971-1973 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] H.Tanaka: "Crystal Structure of cis-(Carbon Monoxide)(η^1-Carboon Dioxide)bis(2,2-bipyridyl)Ruthenium,an Active Species in Catalytic CO_2 Reduction Affording CO and HCOO^-" Organometallics. 11. 1450-1451 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] H.Kambayashi: "Crystal Structure of (Ph_4As)_2[Fe_4S_4(SAD)_4]and Stabiliozation of [Fe_4S_4(SAD)_4]^- State in Aqueous Media." Chem.Lett.919-922 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] S.Suzuki: "The First topa-Containing Copper(II) Complex,[Cu(DL-topa)(bpy)-(H_2O)]BF_4.3H_2O,as a Model for the Active Site in Copper-Containing Amine Oxidase" J.Am.Chem.Soc.114. 6550-6552 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] S.Suzuki: "Synthesis and Structure of a topa-Containing Ternary Copper(II)Complex" J.Inorg.Biochem.47. 54 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] S.Suzuki: "Effect of Type II Copper on Enzyme Activity of Copper-Containing Nitrite Reductase" J.Inorg.Biochem.47. 59 (1992)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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