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MOLECULAR STRUCTURE OF THE NUCLEAR GENOME OF GRAMINEAE PLANTS

Research Project

Project/Area Number 04305009
Research Category

Grant-in-Aid for Co-operative Research (A)

Allocation TypeSingle-year Grants
Research Field 広領域
Research InstitutionFUKUI PREFECTURAL UNIVERSITY (1994)
Kyoto University (1992-1993)

Principal Investigator

TSUNEWAKI Kouichrou  Dept.of Biotech., Fukui Pref.Univ., Prefessor, 生物資源学部, 教授 (20026438)

Co-Investigator(Kenkyū-buntansha) ENDO Takashi  Dept.of Agric.Biology, Kyoto Univ., Professor, 農学部, 教授 (60068830)
YASUMURO Yoshimasa  Dept.of Agronomy, Tottori Univ., Professor, 農学部, 教授 (50026374)
MIKAMI Tetsuo  Dept.of Agronomy, Hokkaido Univ., Professor, 農学部, 教授 (50133715)
HIRAI Atsushi  Dept.of Agronomy, Tokyo Univ., Professor, 農学部, 教授 (60023470)
OGIHARA Yasunari  Kihara Biol.Res.Inst., Yokohama City Univ., Assoc.Professor, 木原生物学研究所, 助教授 (40185533)
向井 康比己  大阪教育大学, 教育学部, 助教授 (30110795)
Project Period (FY) 1992 – 1994
Project Status Completed (Fiscal Year 1994)
Budget Amount *help
¥27,800,000 (Direct Cost: ¥27,800,000)
Fiscal Year 1994: ¥5,000,000 (Direct Cost: ¥5,000,000)
Fiscal Year 1993: ¥10,000,000 (Direct Cost: ¥10,000,000)
Fiscal Year 1992: ¥12,800,000 (Direct Cost: ¥12,800,000)
KeywordsGramineous plants / Linkage map of RFLP loci / DNA library / rRNA genes / Species-specific sequence / Mutator / Gametocidal genes / Highly repeated sequence / 超変異配列
Research Abstract

(1)Toward construction of linkage map of RELP loci : Chromosomal locations of 24 loci of the histone genes and histone-gene regulating protein genes in common wheat have been determined. Further, the positions of some of them in the wheat RFLP map have been specified(TSUNEWAKI). RAPD fragments specific to tetraploid wheat chromosomes have been cloned, and their locations on common wheat chromosomes have been determined by the use of nullitetrasomics(NAKAMURA). In order to construct RFLP map in diploid wheat, genomic library of einkorn wheat has been constructed and clones suitable for RFLP analysis have been screening(OGIHARA). In rice, a giant genomic DNA molecule containing rRNAb genes have been fractionated by pulse-field gel electrophoresis, and its terminal fragments have been cloned and sequences(HIRAI). In perennial ryegrass, genomic DNA clone containing the same rRNA genes has been cloned and its physical map of restriction sites for six kinds of endonucleases has been construc … More ted(MIKAMI).
(2)Studies on specific DNA sequences : Species-or genome-specific, or highly repeated sequences, and sequences presumably moved between organelles have been the objects of this category of the studies. First, using the clones specific specific for the B genome of common wheat as probes, RFLP analysis has been carried out for all species of the section Sitopsis of the genus Aegilops and their phylogenetic relationship has been established(MIYASHITA). Then, rye-, or Ae. squarrosa-specific highly repeated sequences and another family, Afa, have been isolated and their distribution among the chromosomes of these species as well as genomes of other Gramineous species has been studied by new in situ hybridization methods such as GISH and FISH(YAMAMOTO,YASUMURO and TSUJIMOTO). A cDNA clone of the nuclear gene for FoF1-ATPasebeta subunit, that is assumed to have been transferred from mitochondria, has been obtained and its 1kbp region has been sequenced(TERACHI).
(3)Studies on genome-reorganizing genes : Terminally deleted wheat chromosomes by gametocidal genes have been subjected to C-banding analysis and their homozygotes have been screening. Using these lines several cloned genes have been localized on C-banded chromosome map(ENDO). In rice, a mutator gene closely linked to the slender glume gene, slg, has been subjected to extensive RFLP and RAPD analyzes, and a realistic method of reacting the mutator has been discussed(TANISAKA). Less

Report

(4 results)
  • 1994 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • 1992 Annual Research Report
  • Research Products

    (33 results)

All Other

All Publications (33 results)

  • [Publications] Hatano,S.,J.Yamaguchi and A.Hirai: "The preparatieon of high-molecular-weight DNA from rice and its analysis by pulse field gel electrophoresis" Plant Science. 83. 55-64 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Ishii,T.,T.Terachi,N.Mori and K.Tsunewaki: "Comparative study on the chloroplast,mitochondrial and nuclear genome differentiation in two cultivated species,Oryga sativa and O.glaberrima,by RFLP analysis" Theoretical and Applied Genetics. 86. 88-96 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Tsujimoto,H.: "Molecular cytological evidence for gradual telomere synthesis at the broken chromosome ends in wheat" Journal of Plant Research. 106. 239-244 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Endo,T.R.,M.Yamamoto and Y.Mukai: "Structural changes of rye chromosone IR induced by a gametocidal chromosome" Japanese Journal of Genetics. 69. 13-19 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Ogihara,Y.,K.Hasegawa and H,Tsujimoto: "High-resolution cytological mapping of the long arm of chromosome 5A in common wheat using a series of deletion lines induced by gametocidal(GC)genes of Aegiloys speltoides" Molecular and General Genetics. 244. 253-259 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Mori,N.,Y,G.Liu and K.Tsunewaki: "Wheat phylogeny determined by RFLP analysis of nuclear DNA.2.Wild tetraploid wheats" Theoretical and Applied Genetics. 90. 129-134 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Tsunewaki,K.,Y.-G.Liu,S.Takumi,N.Mori,H.Nakamura,T.Terachi and K.Tsunewaki: "Biodiversity and Wheat Improvement(分担執筆)" John Wiley and Sons,Inc.,UK, 434 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Ogihara, Y., K.Hasegawa and H.Tsujimoto.: "High-resolution cytological mapping of the long arm of chromosome 5A in common wheat using a series of deletion lines induced by gametocidal(Gc) genes of Aegilops speltoides" Molecular & General Genetics. 244. 253-259 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Yamamoto, M.: "Regulation of the expression of rDNA regions in two genera, Triticum and Aegilops(in Japanese)" Memoior of Kansai Woman College. 4. 1-20 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Tosa, Y.and H.Tsujimoto.: "Telosomic mapping of wheat genes for resistance to inappropriate formae specialis of Eryshiphe graminis" Wheat Information Service. 79. 33-36 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Endo, T.R., M.Mamamoto and Y.Mukai.: "Structural changes of rye chromosome 1R induced by a gametocidal chromosome" Japanese Journal of Genetics. 69. 13-19 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Yamamori, M., T.Nakamura, T.R.Endo and T.Nagamine.: "Waxy protein deficiency and chromosomal location of coding genes in common wheat" Theoretical & Applied Genetics. 89. 179-184 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Mori, N., Y.-G.Liu and K.Tsunewaki.: "Wheat phylogeny determined by RFLP analysis of nuclear DNA.2. Wild tetraploid wheats" Theoretical & Applied Genetics. 90. 129-134 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Ogihara,Y.,K.Hasegawa and H.Tsujimoto: "High-resdution oytotigial mapping of the long arm of chromosome 5A in common what using a series of deletion lines induced by gametocidal(GC) of Aegilops speltoides" Molecular and General Genetics. 244. 253-259 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Mori,N.,Y.-G.Lin and K.Tsuneamki: "What phylogeny determinal by RFL Panalysis of nuclear DNA.2.Wild tetraploid wheats" Theoretical and Applied Genetics. 90. 129-134 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] 山本真紀: "コムギ,エギロプス両属におけるrDNA領域の発現の調節" 関西女子短期大学紀要. 4. 1-20 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Toda,Y.and H.Tsujimoto: "Telosomic mapping of wheat genes for resistance to inappropriate formal specialis of Eryshiphe graeninis" Wheat Information Service. 79. 33-3b (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Endo,T.R.,M,Yamamoto and Y.Mukai: "Structural changes of rye chromosome IR induced by a genetocidal chromosome" Japanese Journal of Genetics. 69. 13-19 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Yamamori,M.,T.Nakamura,T.R.Endo and T.Nagamine: "Waxy protein deficiency and chromosomal location of coding genes in common wheat" Thesretical and Applied Genetics. 89. 179-184 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 常脇恒一郎: "コムギ核ゲノムのRFLP分析" 育種学最近の進歩. 34. 15-22 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Takumi,S.,S.Nasuda,Y.G.Liu,K.Tsunewaki: "Wheat phylogeny determined by RFLP analysis of nuclear DNA.1,Einkorn wheat" Japanese Journal of Genetics. 68. 73-79 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nakazono,M.,A.Hirai: "Identification of the entire set of transferred chloroplast DNA sequences in the mitochondrial genome of rice" Molecular and General Genetics. 236. 341-346 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Senda,M.,T.Mikami,T.Kinoshita: "The sugar beet mitochondrial gene for the ATPase α-subunit:sequence,transcription and rearrangements in cytoplasmic male sterile plants" Current Genetics. 24. 164-170 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Mukai,Y.,Y.Nakahara,M.Yamamoto: "Simultaneous discrimination of the three genomes in hexaploid wheat by multicolor fluorescence in situ hybridization using total genomic and highly repeatel DNA probes" Genome. 36. 489-494 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Tsujimoto,H.: "Molecular cytological eirdence for gradual telomere synthesis at the broken ends in wheat" Journal of Plant Research. 106. 239-244 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Liu,Y.-G.,T.M.Ikeda and K.Tsunewaki: "Moderately repeated,dispersed,and highly variable(MRDHV) genomic sequences of common wheat usable for cultivar identification" Theoretical and Applied Genetics. 84. 535-543 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Hatano,S.,J.Yama-guchi and A.Hirai: "The preparation of high-molecular weight DNA from rice and its anaysis by pulsed-field gel electrophoresis" Plant Science. 83. 55-64 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Suzuki,T.,N.Mori,C.Nakamura,I.Pana-yotov and C.Kaneda: "Chloroplast and mitochondrial DNAs of allplasmic wheat with cytoplasms of Agropyron glaucum,Ag.trichophorum and Haynaldia villosa" Japanese Journal of Genetics. 67. 405-414 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Terachi,T.,and K.Tsuniwaki: "The molecular basis of genetic diversity among cytoplasms of Triticum and Aegilops.VIII.Mitochondrial RELP analyses using cloned genes as probes" Molecular Biology and Evolution. 9. 917-931 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Mukai,Y.,B.Friebe and B.S.Gill: "Comparison of C-banding patterns and in situ hybridezation sites using highly repetitive and total genomic rye DNA probes of Imperial rye chromosomes added to CS wheat" Japanese Journal of Genetics. 67. 71-83 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Friebe,B.,Y.Mukai and B.S.Gill: "C-banding polymorphisms in several accessions of Triticum tauschii (Aegilops squarrosa)" Genome. 35. 192-199 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Mukai,Y.and T.R.Endo: "Physical mapping of a fertility-restoring gene against Aegilops kotschyi cytoplasm in whet" Japanese Journal of Genetics. 67. 199-207 (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] Tsujimoto,H.and K.Noda: "DNA structure of the B chromosome of rye revealed by in situ hybridization using repetitive sequences" Japanese Journal of Genetics. 67. 233-241 (1992)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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