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Study on the post-transcriptional regulators of cyanobacteria and chloroplasts

Research Project

Project/Area Number 04454003
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 遺伝学
Research InstitutionNagoya University

Principal Investigator

SUGITA Mamoru  Nagoya Univ., Center Gene Research, Associate Prof., 遺伝子実験施設, 助教授 (70154474)

Co-Investigator(Kenkyū-buntansha) WAKASUGI Tatsuya  Nagoya Univ., Center Gene Research, Assistant Prof., 遺伝子実験施設, 助手 (10212317)
Project Period (FY) 1992 – 1994
Project Status Completed (Fiscal Year 1994)
Budget Amount *help
¥6,300,000 (Direct Cost: ¥6,300,000)
Fiscal Year 1994: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 1993: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 1992: ¥2,800,000 (Direct Cost: ¥2,800,000)
KeywordsRNA-binding protein / RNA-binding domain / Cyanobacteria / Chloroplast / Post-transcripnal regulation / Gene / タバコ / シロイヌナズナ / アミノ酸配列
Research Abstract

1.The unicellular cyanobacterium, Synechococcus sp. PCC 6301 has two proteins containing an RNA-binding domain homologous to the chloroplast counterparts. This is the first evidence of RNA-binding proteins (RNPs) in prokaryotes and confirms that chloroplast RNPs are of cyanobacterial origin.
2.Analysis of the genes encoding chloroplast RNPs from tobacco and Arabidopsis thaliana indicated that chloroplast RNPs can be categorized into three groups.
3.Chloroplast RNPs were demonstrated to be associated with a variety of chloroplast mRNA species, non-ribosomal 16S rRNA and intron-containing pre-tRNAs as stable RNA-protein complexes. This observation strongly suggests that the chloroplast RNPs are involved in RNA processing and RNA stability.
4.We discovered novel types of RNA-binding proteins. These novel proteins contain an N-terminal RNA-binding domain and C-terminal glycine-rich domain, therefore they are named RGP (RNA-binding Glycine-rich Proteins). RGP proteins are possibly involved in post-transcriptional regulation in nucleus.
5.Based on the RNA-binding domain structures and nucleic acids-binding properties, we discussed evolutionary relationship of the above three types of RNA-binding proteins.

Report

(4 results)
  • 1994 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • 1992 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] 杉田 護: "Structure and differential expression of two distinct genes encoding the chloroplast elongation factor Tu in tobacco." Current Genetics. 25. 164-168 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] 板谷 啓: "Structure and expression of a cDNA encoding an RNA helicase-like protein in tobacco." Plant Molecular Biology. 24. 249-252 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] 杉田 護: "The existence of eukaryotic ribonucleoprotein consensus sequence-type RNA-binding proteins in a prokaryote,Synechococcus6301." Nucleic Acids Research. 22. 25-31 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] 広瀬 哲郎: "Characterization of a cDNA encoding a novel type RNA-binding protein in tobacco:its expression and nucleic acid-binding properties." Molecular and General Genetics. 244. 360-366 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] 杉田 護: "Sttucture and expression of the gene encoding ribosomal protein SI from the cyanobacterium Synechococcus sp.strain PCC6301:striking sequence similarity to the chloroplast ribosomal protein CSI." Molecular and General Genetics. 246. 142-147 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] 太田 賢: "Three types of nuclear genes encoding chloroplast RNA-binding proteins(cp29,cp31 and cp33)are present in Arabidopsis thaliana:Presence of cp31 in chloropolasts and its homologue in nuclei/cytoplasms." Plant Molecular Biology. 27. 529-539 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Sugita, Mamoru: "Structure and differential expression of two distinct genes encoding the chloroplast elongation factor Tu in tobacco." Curr.Genet.25. 164-168 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Itadani, Hiraku: "Structure and expression of a cDNA encoding an RNA helicase-like protein in tobacco." Plant Mol.Biol.24. 249-252 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Sugita, Mamoru: "The existence of eukaryotic ribonucleoprotein consensus sequence-type RNA-binding proteins in a prokaryote, Synechococcus 6301." Nucl.Acids Res.22. 25-31 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Hirose, Tetsuro: "Characterization of a cDNA encoding a novel type RNA-binding protein in tobacco : its expression and nucleic acid-binding properties." Mol.Gen.Genet.244. 360-366 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Sugita, Mamoru: "Structure and expression of the gene encoding ribosomal protein S1 from the cyanobacterium Synechococcus sp. strain PCC 6301 : striking sequence similarity to the chloroplast ribosomal protein CS1." Mol.Gen.Genet.246. 142-147 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Ohta, Masaru: "Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana : Presence of cp31 in chloropolasts and its homologue in nuclei/cytoplasms." Plant Mol.Biol.27. 529-539 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] 杉田護: "Structure and differential expression of two distinct genes encoding the chloroplast elongation factor Tu in tobacco." Curr.Genet.25. 164-168 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 板谷啓: "Structure and expression of a cDNA encoding an RNA helicase-like protein in tobacco." Plant Mol.Biol.24. 249-252 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 杉田護: "The existence of eukaryotic ribonucleoprotein consensus sequence-type RNA-binding proteins in a prokaryote,Synechococcus 6301."

    • Related Report
      1994 Annual Research Report
  • [Publications] Nucleic Acids Res.22. 25-31 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 広瀬哲朗: "Characterizetion of a cDNA encoding a novel type RNA-binding protein in tobacco:its expression and nucleic acid-binding properties." Mol.Gen.Genet.244. 360-366 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 杉田護: "Structure and expression of the gene encoding ribosomal protein Sl from the cyanobacterium Synechococcus sp.strain PCC 6301:striking sequence similarity to the chloroplast ribosomal protein CSl." Molecular and General Genetics. 246. 142-147 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] 太田賢: "Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29,cp31 and cp33)are present in Arabidopsis thaliana:Presence of cp31 in chloropolasts and its homologue in nuclei/cytoplasms." Plant Molecular Biology. 27. 529-539 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] 村山有子: "Purification of chloroplast elongation factor Tu and cDNA analysis in tobacco:the existence of two chloroplast elongation factor Tu species." Plant Molecular Biology. 22. 767-774 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 広瀬哲郎: "cDNA structure,expression and nucleic acid-binding properties of three RNA-binding proteins in tobacco:occurence of tissue-specific alternative splicing." Nucleic Acids Research. 21. 3981-3987 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 李 育慶: "Structure and expression of the tobacco nuclear gene encoding the 31 kDa chloroplast ribonucleoprotein." Molecular and General Genetics. 239. 304-309 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 板谷 啓: "Structure and expression of cDNA encoding an RNA helicase like protein in tobacco." Plant Molecular Biology. 24. 249-252 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 杉田 護: "The existence of eukaryotic ribonucleoprotein consensus sequence-type RNA-binding proteins in a prokaryote,Synechococcus 6301." Nucleic Acids Research. 22. 25-31 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 杉田 護: "Structure and differential expression of two distinct genes encoding the chloroplast elongation factor Tu in tobacco." Current Genetics. 25. 164-168 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 杉浦昌弘: "Organization and expression of the chloroplast genome from higher plants.In The Proceedings of Endocytobiology V(Ishikawa,H.ed.)" Tubingen University Press, 307-312 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 杉田 護: "RNAと蛋白質の相互作用-真核細胞RNPの構造と機能." 共立出版(蛋白質核酸酵素), 91-93 (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] 續 順子: "Chloroplast DNA of black pine retains a residual inverted repeat lacking rRNA genes: nucleotide sequences of trnQ trnK,psbA, trnI and trnH and the absence of rps16." Molecular & General Genetics. 232. 206-214 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 李 育慶: "cDNA cloning and sequencing of tobacco chloroplast ribosomal protein L12." FEBS Letters. 300. 199-202 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 杉田 護: "植物遺伝子の転写後制御機構ー葉緑体RNA結合蛋白質ー" 蛋白質 核酸 酵素. 37. 1155-1164 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 若杉 達也: "葉緑体ゲノムの転写地図" 蛋白質 核酸 酵素. 37. 1077-1080 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 李 育慶: "Structure and expression of the tobacco nuclear gene encoding the 33 kd chloroplast ribonucleoprotein." Molecular & General Genetics. 237. (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] 杉田 護: "Nucleic acid-binding proteins containing a consensus sequence-type RNA-binding domain of the cyanobacterium Anacystis nidulans. in “Research in Photosynthesis"" Kluwer Academic Press, (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] 太田 賢: "The structure and expression of chloroplast ribonucleo-protein genes from Arabidopsis thaliana. in “Research in Photosynthesis"" Kluwer Academic Press, (1992)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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