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Regulatory mechanisms of gene expression through the interactions of transcription factors in plants

Research Project

Project/Area Number 04454013
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 植物生理学
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

IWABUCHI Masaki  Kyoto Univ.Botany Professor, 理学部, 教授 (30000839)

Co-Investigator(Kenkyū-buntansha) MESHI Tetsuo  Kyoto Univ.Botany Assoc.Professor, 理学部, 助教授 (40157813)
Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 1993: ¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1992: ¥4,500,000 (Direct Cost: ¥4,500,000)
Keywordshistone H3 gene / S phase gene expression / type I cis-element / transcription factor / HBP-1a subfamily / OBRF / HALF1 / protein-protein interaction / ヘキサマーシス・エレメント / オクタマーシス・エレメント / トランス転写因子 / 形質転換細胞 / 単鎖DNA結合因子 / タンパク質-タンパク質相互作用
Research Abstract

Focusing on the transcription factors, HBP-1a and HBP-1b, that bind to the hexamer sequence in the type I element which defines the S phase-specific transcription of a wheat histone H3 gene (TH012), we investigated the structures and functions of the members of the HBP-1 transcription factor family and other transcription factors that interact with these members. Within a research term, we obtained the following results.
1. The members of the HBP-1 family differ in their ability of the dimer formation and their affinity for DNA-binding. This finding suggests a possibility that the HBP-1 family members would control the gene expression by changing the partners of the members to from homo- or hetero-dimers through the bZIP domain.
2. A DNA-binding protein (OBRF) was identified which specifically interacts with an octamer sequence, another cis-sequence within the type I element, by the DNA mobility shift assay of the nuclear extract from wheat cultured cells. Although OBRF was labile, its DNA-binding activity was the highest at the S phase of cell cycle and parallel with the level of the histone H3 gene expression through the cell cycle.
3. A cDNA clone encoding the protein, termed HALF1, was isolated which associates with HBP-1a(17) through the protein-protein interactions by the West-western screening method. Sequence analysis of the cDNA clone revealed that an overall structure of HALF1 resembles that of the HBP-1a subfamily. The DNA-binding experiments showed that HALF1 can not bind to DNA (hexamer sequence) as a homodimer but interact with DNA as a heterodimer containing HBP-1a(17). The results suggest that HALF1 may be involved in the H3 gene regulation through the interaction with the members of the HBP-1a subfamily.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (35 results)

All Other

All Publications (35 results)

  • [Publications] Nakayama,Takuya: "Highly consered hexamer,octamer and nonamer motifs are positive cis-regulatory elements of the wheat histone H3 gene" FEBS Lett.300. 167-170 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Kawata,Takefumi: "Isolation and characterization of a cDNA clone encoding the TATA box-binding protein(TFIID)from wheat" Plant Mol.Biol.19. 867-872 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Terada,Rie: "A heat histone H3 promoter confers cell division-dependent and-independent expression of the gus A gene in transgenic rice plants" Plant J.3. 241-252 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Minami,Maki: "Coordinate gene expression of five subclass histones and the putative transcription factors,HBP-1a and HBP-1b,of histone genes in wheat" Plant Mol.Biol.23. 429-434 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Takase,Hisabumi: "Transcriptional and post-transcriptional regulation of the expression of wheat histone gene:cis-acting elements and trans-acting factors" J.Plant Res.3. 37-50 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Sakamoto,Ayako: "The putative zing-finger protein WZF1 interacts with a cis-acting element of wheat histone genes" Eur.J.Biochem.217. 1049-1056 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 岩渕雅樹,志村令郎 編著: "植物遺伝子の発現制御研究のための基礎知識「ラボマニュアル植物遺伝子の機能解析」" 丸善株式会社, 12 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Mikami,Koji: "Regulation of cell cycle-dependent gene expression.In“Control of Plant Gene Expression"(ed.D.P.S.Verma)" CRC Press Inc., 17 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nakayama, T.: "Highly conserved hexamer, octamer and nonamer motifs are positive cis-regulatory elements of the wheat histone H3 gene." FEBS Lett.300. 167-170 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Kawata, T.: "A cDNA clone encoding HBP-1b homologue in Arabidopsis thaliana." Nucl.Acids Res.20. 1141 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Kawata, T.: "Isolation and characterization of a cDNA clone encoding the TATA box-binding protein(TFIID)from wheat." Plant Mol.Biol.19. 867-872 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Terada, R.: "A wheat histone H3 promoter confers cell division-dependent and-independent expression of the gus A gene in transgenic rice plants." Plant J. 3. 241-252 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ishiguro, S.: "A nuclear factor that binds to a dyad symmetric sequence with CGTCA motif in the 5'-upstream region of sweet potato beta-amylase gene." Plant Cell Physiol.34. 567-576 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nasuda, S.: "Chromosomal locations of the genes for histones and a histone gene-binding protein family HBP-1 in common wheat." Plant Mol.Biol.22. 603-614 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Minami, M.: "Coordinate gene expression of five subclass histones and the putative transcription factors, HBP-1a and HBP-1b, of histone genes in wheat." Plant Mol.Biol.23. 429-434 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ohtusbo, N.: "Proximal promoter region of the wheat histone H3 gene confers S phase-specific gene expression in transformed rice cells." Plant Mol.Biol.23. 553-565 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Sakamoto, A.: "The putative zinc-finger protein WZF1 interacts with a cis-acting element of wheat histone genes." Eur.J.Biochem.217. 1049-1056 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Mikami, K.: "The HBP-1 family of wheat bZIP proteins interacts with overlapping cis-actiting hexamer motifs of plant histone genes." J.Biol.Chem.(in press). (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Ohtsubo, N.: "The conserved 3'-flanking sequence, AATGGAAATG, of wheat histone H3 gene is necessary for the accurate 3'-end formation of mRNA." Nucl.Acids Res.(in press). (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Nakayama,Takuya: "Highly consered hexamer,octamer and nonamer motifs are positive cis-regulatory elements of the wheat histone H3 gene" FEBS Lett.300. 167-170 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] Kawata,Takefumi: "Isolation and characterization of a cDNA clone encoding the TATA box-binding protein (TFIID) from wheat" Plant Mol.Biol.19. 867-872 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] Terada,Rie: "A heat histone H3 promoter confers cell division-dependent and -independent expression of the gus A gene in transgenic rice plants" Plant J.3. 241-252 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Minami,Maki: "Coordinate gene expression of five subclass histones and the putative transcription factors,HBP-1a and HBP-1b,of histone genes in wheat" Plant Mol.Biol.23. 429-434 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Takase,Hisabumi: "Transcriptional and post-transcriptional regulation of the expression of wheat histone gene:cis-acting elements and trans-acting factors" J.Plant Res.(1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Sakamoto,Ayako: "The putative zing-finger protein WZF1 interacts with a cis-acting element of wheat histone genes" Eur.J.Biochem.217. 1049-1056 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 岩渕雅樹: "植物遺伝子の発現制御研究のための基礎知識「ラボマニュアル植物遺伝子の機能解析」(岩渕雅樹 志村令郎 編著)" 丸善株式会社, 12 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] Mikami,Koji: "Regulation of cell cycle-dependent gene expression.In “Control of Plant Gene Expression"(ed.D.P.S.Verma)" CRC Press Inc., 17 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Takase,Hisabumi: "Sequence-specific single-strand DNA-binding proteins that interact with the regulatory regions of wheat histone H3 and H4 genes" Biochem.Biophys.Res.Commun.,. 176. 1593-1600 (1991)

    • Related Report
      1992 Annual Research Report
  • [Publications] Nakayama,Takuya: "Highly conserved hexamer,octamer and nonamer motifs are positive cis-regulatory elements of the wheat histone H3 gene" FEBS Lett.300. 167-170 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Kawata,Takefumi: "A cDNA cone encoding HBP-lb homologue in Arabidopsis thaliana" Nucl.Acids Res.20. 1141- (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Kawata,Takefumi: "Isolation and characterization of a cDNA clone encoding the TATA box-binding protein (TFIID) from wheat" Plant Mol.Biol.19. 867-872 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Terada,Rie: "A wheat histone H3 promoter confers cell division-dependent and -independent expression of the gus A gene in transgenic rice plants" Plant J.3. 241-252 (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] Takase,Hisabumi: "Transcriptional and post-transcriptional regulation of the expression of wheat histone gene:Cis-acting elements and trans-acting factors" J.Plant Res.(1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] 岩渕 雅樹: "植物遺伝子の発現制御研究のための基礎知識 「ラボマニュアル植物遺伝子の機能解析」 (岩渕雅樹 志村令郎 編著)" 丸善株式会社, 12 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Mikami,Koji: "Regulation of cell cycle-dependent gene expression.In “Control of Plant Gene Expression"(ed.D.P.S. Verma)" CRC Press Inc., 17 (1993)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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