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Analysis of Genomic Imprinting Genes in Mammals

Research Project

Project/Area Number 04455013
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 広領域
Research InstitutionTokyo Institute of Technology

Principal Investigator

ISHINO Fumitoshi  Gene Research Center Tokyo Institute of Technology, Associate Professor, 遺伝子実験施設, 助教授 (60159754)

Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥4,000,000 (Direct Cost: ¥4,000,000)
Fiscal Year 1993: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1992: ¥3,000,000 (Direct Cost: ¥3,000,000)
Keywordsgenomic imprinting / subtractive cloning / parthenogenesis / PCR / molecular biology / development / early embryos / cDNAライブラリー / サブトラクション / ゲノミック・インプリンテング / 遺伝子増幅法
Research Abstract

Paternal and maternal genomes play different role in mammalian development. Different expression of some kind of genes seems to be the mechanism of genomic imprinting. In order to elucidate the biological importance of the genomic imprinting, we developed new subtraction method combined with PCR to isolate such genes systematically. Fertilized embryos contain both paternal and maternal genomes, on the other hand, parthenogenetic embryos contain only maternal genomes. Therefore, we could obtain genes specifically expressed from paternal genome by subtraction the latter cDNA from the former cDNA.Parthenogenetic embryos could develop at most day 9 (25-somite stage). It is very difficult to obtain enough amout of embryols to make cDNA library and to carry out subtractive cloning, because the mouse embryos at this stage are very small. In order to solve this problem, we amplified the mouse cDNAs with PCR.By introducing specific linkers at both side of cDNA,and improving several reaction conditions of PCR,cDNAs which are consisted with 0.5 10kb fragments were able to amplified without significant bias. Moreover, using two types of linkers to make different cDNA library, we can amplify only one type of cDNA between the mixture of two different cDNA.A series of subtraction were carried out between these cDNAs. Results after third cycle of subtraction showed that lgf-2 (paternal specific gene) was effectively concentrated in this method, while beta-actin (non-specific gene) was decreased almost to the background level. So far, four paternally expressed genes (including 2 new genes) were obtained by using the subtracted cDNA as probes. More extensive screening are now being carried out. We hope we get more information about the number and the function of genes concerning genomic imprinting to elucidate the biological importance of this phenomenon by analyzing these genes.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (4 results)

All Other

All Publications (4 results)

  • [Publications] F.ISHINO et al: "Screening of imprinting in the mouse." Abstracts in The Eighth International Conference of the International Society of Differentiation.186- (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] T.KANEKO-ISHINO el al: "Genes differentially expressed between fertilized and parthenogenetic embryos in the mouse." (in preparation). (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] F.Ishino et al: "Screening of imprinting genes in the mouse" Abstracts in The Eighth International Conference of the International Society of Differentiation Hiroshima. 186 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] T.Kneko-Ishino et al: "Genes differentially expressed between fertilized and parthenogenetic embryos in the mouse" (in preparation). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary

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Published: 1992-04-01   Modified: 2016-04-21  

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