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Improvement of enzymes by radom mutagenesis

Research Project

Project/Area Number 04650875
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 発酵工学
Research InstitutionOsaka University

Principal Investigator

URABE Itaru  Osaka Univ. Dept. of Bioeg., Prof., 工学部, 教授 (60029246)

Co-Investigator(Kenkyū-buntansha) YOMO Tetsuya  Osaka Univ. Dept. of Bioeg., Assist. Prof., 工学部, 助手 (00222399)
NEGORO Seiji  Osaka Univ. Dept. of Bioeg., Assist. Prof., 工学部, 助教授 (90156159)
Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1993: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1992: ¥1,300,000 (Direct Cost: ¥1,300,000)
Keywords酵素の改良 / タンパク質工学 / ランダム変異 / 配列空間 / B.stearothermophilus / ペルオキシダーゼ
Research Abstract

a landscape in protein sequence space shows th reiationship between the primary structure and the level of a property of each protein. We developed methods for observing local Iands capes experimentally through catalase I from Bacillus stearothermophilus with respect to its catalatic activity, peroxidatic activity, and thermostability. The enzyme gene was randomly mutated and a mutant library composing of 2648 transformants was obtained. Based on the activity and productivity of these transformants, 82 were selected as a sample group for measuring the altitude of catalase I.The altitude of the wild-type enzyme is close to the highest level in the mutant population for the termostability landscape, but is at theaverage level for the peroxidatic activit. as for the catalytic activity, its altitude lies in between the two positions. A positive correlation was found between the altitude of the catalatic and the peroxidatic activities, indicating that the location of the hills and valleys in he landscapes of the two activities roughly correspond with each other. In contrast, the thermostability landscape appeared quite differently. The smoothness of the landscape was examined through the number of mutations in the structural geves of the mutant enzymes of different properties. The correlation beween the number of mutations and the level of each property showed that the thermoxtability landscape is smooth. but not with the two activity landscapes. Thus, the results show that even form a rough sketch of the landcapes based on the experimental data, the characteristic features of catalase I can be elucidated. The sketch of landscape, therefore, probides a new view in understanding enzymes.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (5 results)

All Other

All Publications (5 results)

  • [Publications] Tetsuya Yomo: "Promenade in the sequence space of bacterial catalase by random mutagenesis" Anals of New York Acad.Sci.672. 103-105 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Savitr Trakuinaleamsi: "Revised Squence and Activity of Bacillus stearothermophilus Catalase I (Formerly Peroxidase)" J.Ferment. Bioeng.74. 234-237 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tetsuya Yamo: "Promenade in the sequence space of bacterial catalase by random mutagenesis" Anals of New York Acad. Sci.672. 103-105 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Tetsuya Yomo: "Promenade in the sequence space of bacterial catalase by random mutagenesis" Anals of New York Acad.Sci.672. 103-105 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Savitr Trakulnaleamsai: "Revised Sequence and Activity of Bacillus stearothermophilus Catalase I(Formerly Peroxidase)" J.Ferment.Bioeng.74. 234-237 (1992)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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