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Structure-Function Relationships of Pepstation-insensitive Carboxyl Proteinase from Bacteria

Research Project

Project/Area Number 04660125
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 応用微生物学・発酵学
Research InstitutionFaculty of Textile Science. Kyoto Institute of Technology

Principal Investigator

ODA Kohei  Kyoto Institute of Technology Department of Applied Biology Faculty of Textile Science Professor, 繊維学部, 教授 (50081584)

Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1993: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 1992: ¥1,600,000 (Direct Cost: ¥1,600,000)
KeywordsAcid proteinase / Carboxyl proteinases / Aspartic proteinase / Pepstain-insensitive / S-PI-insensitive / Scytalidium type / Pepsin type / Structure-Function Relationship / 酸性プロテアーゼ
Research Abstract

It is well known that carboxyl proteinases are commonly inhibited by pepstain^<1)>, DAN^<2)>, and EPNP^<3)>, and their catalytic residues are composed of two aspartic acid residues. Thus, carboxyl proteinases are termed aspartic proteinases. These enzymes are highly homologous in both the primary and tertiary structures.
We have isolated novel carboxyl proteinases from frugi, bacteria and also thermophilic bacteria based on their insensitivities to pepstatin, DAN and EPNP.These enzymes were tentatively named pepstatin-insensitve carboxyl proteinases. In one of our studies, the primary structure of carboxyl proteinase B (consisting of 204 amino acids) from a fungus Scytalidum lignicolum has been established, and one of the catalytic residues of the enzyme was clarified to be Glu-53. This is the first report on glutamic proteinase. It seemed probable that the pepstain-insensitive carboxyl proteinases are not aspartic proteinases but glutamic proteinases. To confirm this possibility, we fo … More cussed our studies on a pepstatin-insensitive carboxyl proteinase from Pseudomonas sp. No. 101(PCP), which is the first carboxyl proteinase isolated from prokaryote cells. The primary structure of PCP has been determined to be a single polypeptide composed of 372 amino acid residues with one disulfide bridge. PCP does not have any homologous structure to those of aspartic proteinases reported so far. Moreover, the well-conserved structure, -Asp^<**>-Thr-Gly-(Asp^<**> : catalytic residue) in the active center of aspartic proteinases was not observed.
In this study, the following results wera obtained.
1. Identification of Catalytic Residues In our attempt to use inhibitor in the study of active center, we had isolated a novel inhibitor. tyrostatin (N-isovaleryl-tyrosyl-leucyl-tyrosinal, Ki = 2.5Nm) from Kitasatosporia sp.No.55. Based on the cmemical structure. we succeeded in synthesizing a compeptive inhibitor, available for probing the catalytic residues of PCP(N-benzyloxycarbonyl-L-phenyl-atanine-2,3-epoxypropyl ester).
2. Analysis of PCP Gene We determined the whole DNA sequence of the PCP gene(about 3 Kbp). It was elucidated that PCP is composed of prepro part protein (215 amino acid residues) and mature protein (372 amino acid residues). Primary structure of the mature protein was identical to that chemically determined previouly. It was suggested that the propart protein plays important roles in the activation as well as secretion through the double layr of the cell.
Accordingly, it is ready now to study the structure-function relationships, especially the catalytic residues on both side of protein and DNA level.
1) pepstatin, pepsin inhibitor ; 2) DAN, diazoacetyl-DL-norleucine methylester ; 3) EPNP, 1,2-epoxy-3-(p-nitrophenoxy) propane. Less

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (16 results)

All Other

All Publications (16 results)

  • [Publications] S.Murao: "Purification and Characterization of Kumamolysin,a Novel Thermostable Pepstatin-insensitive Carboxyl Proteinase from Bacillus novosp.MN-32" J.Biol.Chem.268. 349-355 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] K.Oda: "Substrate Specificity,and Kinetic Properties of Pepstatin-insensitive Carboxyl Proteinase from Pseudomonas sp.No.101" Biochim.Biophys.Acta. 1120. 208-214 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] K.Oda: "Structure and Function of The Aspartic Proteinases Genetics,Structures,and Mechanisms" ed.by B.M.Dunn Plenum Publishing Corporation,N.Y., 16 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] 小田耕平: "化学と生物" 日本農芸化学会編 学会出版センター刊, 9 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] K.Oda, H.Nakatani and B.M.Dunn: "Substrate Specificity, and Kinetic Properties of Pepstatin-insensitive Carboxyl proteinase from Pseudomonas sp. No.101" Biochim.Biophys.Acta. 1120. 208-214 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] S.Murao, K.Ohkuni, M.Nagao, K.Hirayama, K.Hukuhara, K.Oda, H.Oyama and T.Shin: "Purification and Characterization of Kumamolysin, a Novel Thermostable Pepstatin-insensitive Carboxyl Proteinase from Bacillus novosp. MN-32" J.Biol.Chem.268. 349-355 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] K.Oda, T.Takahasni, Y.Tokuda, Y.Shibano and S.Takahashi: "Cloning, Sequencing, and Expression of Pepstatin-insensitve Carboxyl Proteinase Gene from Pseudomonas sp. No. 101" J.Biol.Chem.(under submission).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] K.Oda, H.Izu, K.Hayashi, S.Hara and k.Hukuhara: "Complete Amino Acid Sequence of Pepstatin-insensitive carboxyl proteinase from Pseudomonas sp. No. 101" J.Biol.Chem.(in preporation).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] K.Oda, and S.Murao: Structure and Function of The Aspartic Proteinases Genetics, Structures, and Mechanisms ed. by B.M.Dunn "Pepstatin-insensitive Carboxyl Proteinases". Plenum Publishing Corporation, N.Y., 16 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] S.Murao: "Purification and Characterization of Kumamolysin,a Novel Thermostable Pepstatin-insensitive Carboxyl Proteinase from Bacillus novosp.MN-32" J.Biol.Chem.,. 268. 349-355 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] K.Oda: "Substrate Specificity,and Kinetic Properties of Pepstatin-insensitive Carboxyl Proteinase from Pseudomonas sp.No.101" Biochim.Biophys.Acta. 1120. 208-214 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] 小田耕平: "化学と生物" 日本農芸化学会編 学会出版センター刊, 9 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] K.Oda: "Structure and Function of The Aspartic Proteinases Genetics,Structures,and Mechanisms" ed.by B.M.Dunn Plenum Publishing Corporation,N.Y., 16 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] S.Murao: "Purification and Characterization of Kumamolysin,a Nobel Thermostable Pepstatin-insensitive Carboxyl Proteinase from Bacillus novosp.MN-32" J.Biol.Chem.268. 349-355 (1993)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Oda: "Substrate specificity and Kinetic properties of pepstatin-insensitive carboxyl proteinase from pseudomonas sp.No.101" Biochim.Biophys.Acta. 1120. 208-214 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] K.Oda: "Structure and Function of The Aspartic Proteinases:Genetics,Structures,and Mechanisms ed.B.M.Dunn" Plennm Press,New York and London, 16 (1991)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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