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Analysis of Structure-Activity Relationship of Peptides as Inhibitors of Platelet Aggregation

Research Project

Project/Area Number 04660141
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 製造化学・食品
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

AKAMATSU Miki  Kyoto University, Agriculture, Instructor, 農学部, 助手 (70183134)

Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1993: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 1992: ¥1,400,000 (Direct Cost: ¥1,400,000)
KeywordsRGD / Arg-Gly-Asp / Inhibition of Platelet Aggregation / Hydrophobicity of Peptides / Partition Coefficient / 1-Octanol / Water
Research Abstract

1. The compounds were synthesized by the solid-phase method using Fmoc-amino acids. Effects of the test compounds were measured in human platelet rich plasma (PRP) as the inhibition of ADP-mediated platelet aggregation. We examined the inhibitory activity values of a series of RGDX.Previously, we proposed the pi_<alpha> value as a hydrophobicity index for amino acid side chain based on the analysis of the partition coefficients of N-acetyl peptide amides in the 1-octanol/water system. It was indicated that the inhibitory activity of peptides increased with the pi_<alpha> value of the residue X.However, in general the activity of peptides in which the side chain of the residue X is an alkyl group was lower than that of peptides including the residue X with an aromatic ring, suggesting the steric effect of the X side chain for the activity.
2. The inhibitory activity of some peptides is enhanced by elimination of the amino group of the Arg residue and by substitution of the amide bond of Arg-Gly with methylene. We synthesized this type of peptide mimetics with other nitrogen-containing groups instead of guanidino group of Arg and measured the inhibitory activity. We calculated the interaction energy of the nitrogen-containing cations in ligands with a carboxylate anion in the receptor by ab initio calculation to examine the correlation between the energy and the activity. The greater the interaction energy, the higher the inhibitory activity seemed to be.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (7 results)

All Other

All Publications (7 results)

  • [Publications] Miki Akamatsu: "A new hydrophobicity index for amino acid side chains and its applications" Peptide Chemistry. 1992. 446-448 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Masahiro Miyashita: "Structure-activity relationship of RGD-related compounds as fibrinogen receptor antagonists" Peptide Chemistry. 1993(in press).

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Miki Akamatsu and Toshio Fujita: "A new hydrophobicity index for amino acid side chains and its applications" Peptide Chemistry, 1992. 446-448 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Masahiro Miyashita, Hideki Ueno, Miki Akamatsu, Keiichiro Nishimura, Tamio Ueno, and Toshio Fujita: "Structure-activity relationship of RGD-related compounds as fibrinogen receptor antagonists" Peptide Chemistry. (in press). (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Miki Akamatsu: "A new hydrophobicity index for amino acid side chains and its applications" Peptide Chemistry. 1992. 446-448 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Masahiro Miyashita: "Structure-activity relationship of RGD-related compounds as fibrinogen receptor antagonists" Peptide Chemistry. 1993(in press).

    • Related Report
      1993 Annual Research Report
  • [Publications] Miki Akamatsu: "A New Hydrophobicity Index for Amino Acid Side Chains and Its Applications" Peptide Chemistry. 1992.

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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