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Analysis by Engineering for Two DNA Binding Proteins That Regulate The Initiation of Ribosomal RNA Synthesis.

Research Project

Project/Area Number 04670137
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field General medical chemistry
Research InstitutionUniversity of Tokyo

Principal Investigator

NISHIMURA Tetsuji  University of Tokyo, School of Medicine, Department of Biochemistry, Assistant, 医学部(医), 助手 (20156110)

Project Period (FY) 1992 – 1993
Project Status Completed (Fiscal Year 1993)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1993: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1992: ¥1,300,000 (Direct Cost: ¥1,300,000)
KeywordsRibosomal RNA Gene / DNA Binding Proteins / Promoter Region / CAT Assay / Transcriptional Regulation / In Vitro rRNA Synthesis / House-keeping Gene / Genetic Engineering / 核移行シグナル / 核小体 / HMG‐box
Research Abstract

It is necessary two DNA binding proteins, Upstream Binding Protein(UBF)and SL-1, for formation of the initiation complex of ribosomal RNA gene(rDNA)transcription. Mouse UBF has a nuclear localization sequence in the 4th HMG-box. Deletion of either the HMG-box1, a region crucial for rDNA binding, or the acidic tail, a region that may interasct with SL-1, results in the loss of necleolar targeting. HMG-box1 is necessary for UBF to bind to the upstream control element of the rDNA.Mouse UBF is transferred to the nucleus by its NLS and is sequestered in the nucleous by its specific and stable binding to the rDNA promoter via HMG-boxes and the acidic tail.
The region between the transcriptional initiation site and -1200nt shows the promoter activities. In this region, there are several GC-boxes and three kinds of serum response elements, but no TATA-box or CAT-box. The existence of those cis acting element is necessary for regulation of the UBF gene. The mRNA of UBF was expressed 4 times after nutritional shift-up. These observation indicates UBF gene is one of the house-keeping genes and is regulated through several kinds of element in the promoter region correspondingly with growth-stimulation signals. SL-1 is constituted with 5 kinds of proteins, containing TATA binding protein(TBP), at least. UBF binds with protein associated TBP.Ribosomal RNA synthesis in vitro is inhibited with anti-body against TBP.
So TBP binds the promoter region of rDNA.And then UBF makes a stable complex with SL-1/DNA complex as pre-initiation complex of rDNA transcription.

Report

(3 results)
  • 1993 Annual Research Report   Final Research Report Summary
  • 1992 Annual Research Report
  • Research Products

    (9 results)

All Other

All Publications (9 results)

  • [Publications] Y.Maeda et al.: "Mouse rRNA gene transcription factor mUBF requires both HMG-boxland an acidic tail for nucleolar accumulation:molecular analysis of the nucleolar targeting mechanism" EMBO J.11. 3695-3704 (1992)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Y.Mishima et al.: "Transcription of mouse ribosomal RNA gene with inactive extracts activated by NAD^+ in vitro." J.Biochem.113. 36-42 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Y.Maeda et al.: "Mouse rRNA gene transcription factor mUBF requires both HMG-box1 and an acidic tail for nucleolar accumulation : Molecular analysis of the nucleolar targeting mechanism." EMBO J.11. 3695-3704 (1992)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Y.Mishima et al.: "Transcription of mouse ribosomal RNA gene with inactive extracts is activated by NAD^+ in vitro." J.Biocem.113. 36-42 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1993 Final Research Report Summary
  • [Publications] Yasushi Maeda: "Mouse rRNA gene transcription factor mUBF reguires both HMG-bonland an acidictail for nucleolar aceumulation:molecular analysis of the nucleolar targeting nuoleclassigus." The EMBO Journal. 11. 3695-3704 (1992)

    • Related Report
      1993 Annual Research Report
  • [Publications] Yukio Mishima: "Transcription of Mouse Ribosomal RNA Gene with Inactive Extracts Is Activated by NAD^+ In Vitro" J.Biochemistry. 113. 36-42 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 村松正實: "RNAポリメラーゼIによるリボソームRNA遺伝子転写の分子機構" 転写因子研究の新展開. 11. 10-17 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Yasushi Maeda,Koji Hisatake,Takashi Kondo,Kenichi Hanada,Chaozhong Song,Tetsuji Nishimura,Masami Muramatsu: "Mouse rRNA gene transcription factor mUBF requires both HMG-box1 and an acidic tail for nucleolar accumulation:molecular analysis of the nucleolar targeting mechanism." The EMBO Journal. 11. 3695-3704 (1992)

    • Related Report
      1992 Annual Research Report
  • [Publications] Yukio Mishima,Tetsuji Nishimura,Masami Muramatsu,Ryo Komirami.: "Transcription of Mouse Ribosomal RNA Gene with Inactive Extracts Is Activated by NAD^+ In Vitro." J.Biochem.113. 36-42 (1993)

    • Related Report
      1992 Annual Research Report

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Published: 1992-04-01   Modified: 2016-04-21  

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