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Molecular biological and genetical study on the mechanism of chromosomal DNA replicaiton in eukaryotes -Yeast as a model-

Research Project

Project/Area Number 05404083
Research Category

Grant-in-Aid for General Scientific Research (A)

Allocation TypeSingle-year Grants
Research Field Molecular biology
Research InstitutionOsaka University

Principal Investigator

SUGINO Akio  Osaka Univ., Res.Inst.Microbial Diseases, Professor, 微生物病研究所, 教授 (90231737)

Co-Investigator(Kenkyū-buntansha) LEEM Sun-hee  Osaka Univ., Res.Inst.Microbial Diseases, Research Associate, 微生物病研究所, 助手 (40263313)
MAKI Satoko  Osaka Univ., Res.Inst.Microbial Diseases, Research Associate, 微生物病研究所, 助手 (60212205)
川崎 泰生  大阪大学, 微生物病研究所, 助手 (30243257)
荒木 弘之  大阪大学, 微生物病研究所, 助教授 (20151160)
Project Period (FY) 1993 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥32,000,000 (Direct Cost: ¥32,000,000)
Fiscal Year 1995: ¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 1994: ¥14,100,000 (Direct Cost: ¥14,100,000)
Fiscal Year 1993: ¥14,200,000 (Direct Cost: ¥14,200,000)
KeywordsEukaryotic chromosomal DNA replication / Saccharomyces cerevisiae / DNA polymerase II (epsilon) / DNA polymerase III (delta) / DNA polymerase subunits / three DNA polymerase model / Cdc 7-Dbf4 complex / phosphatase / DNAポリメラーゼ / 細胞周期チェックポイント制御 / ORC蛋白 / 複製開始部位 / DNAヘリカーゼ / DNAポリメラーゼ補助因子 / In vitro DNA複製 / 蛋白精製 / クローニング
Research Abstract

1. Identification and purification of protein factor (s) interacting with either DNA polymerase II (epsilon) or III (delta) of Saccharromyces cerevisiae We have shown that DNA polymerase II (epsilon) is required for chromosomal DNA replication as well as two other DNA polymerase, DNA polymerase I (alpha) and III (delta) and have been proposing "three DNA polymerase model for eukaryotic chromosomal DNA replication." To prove this model, we have been reconstituting both leading and lagging strand replication complexes. In this study, we have identified and cloned the DPB11 gene whose product (Dpb11) interacts with DNA polymerase II (epsilon) catalytic and the second largest subunits.
S.cerevisiae DNA polymerase III (delta) complex has been extensively purified and found to consist of at least three subunits, the 125-kDa catalytic subunit encoded by CDC2 (or POL3), the 55-kDa second largest subunit, and the 50-kDa subunit. We have determined partial amino acid sequence of both 55-kDa and 5 … More 0-kDa subunit polypeptides. The results showed that the 55-kDa subunit is the product of HUS2, which Matsumoto's group recently isolated and sequenced, and the 50-kDa subunit is the product of newly identified gene, YHR065C,which encodes a polypeptide having RNA helicase domain. These results suggest that DNA polymerase III (delta) complex participates in process of RNA primar removal from Okazaki-fragments (lagging strand synthesis product) during chromosome DNA replication.
2. Identification of protein factor (s) which regulates the initiation of chromosomal DNA replication in S.cerevisiae. In the budding yeast S.cerevisiae, it has been known that the initiation of chromosomal DNA replication is regulated by Cdc7-Dbf4 cell-cycle protein kinase. In order to further understand its regulation, we have tried to isolate multicopy suppressors of the temperature-sensitive dbf4-1 mutation. From this experiments, we have identified, cloned, and sequenced two new genes, MSD3 and GLU8. MSD3 is an essential gene for cell growth and its temperature sensitive mutant cells (msd3-1) exhibited temperature-sensitive initiation of chromosomal DNA replication. GLU8 is known to be a reglator of the GLU7 gene product, a type I phosphatase. Therefore, the control of the initiation of chromosomal DNA replication is regulated by dephosphorylation as well as phosphorylation. Less

Report

(4 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • 1993 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] Noskov V.: "The RFC2 gene encoding a subunit of Replication Factor C of Saccharomyces cerevisiae." Nucleic Acids Res.22. 1527-1535 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Leem S. -H.: "The Yeast Saccharomyces cerevisiae DNA polymerase IV : possible involvement in double-strand break DNA repair." Nucleic Acids Res.22. 3011-3017 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Sugino A.: "Yeast DNA polymerases and their role at the replicatoin fork." Trends in Biochemical Sciences. 20. 319-323 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tran H. T.: "Replication slippage between distant short repeats in Saccharomyces cereevisiae depends on the direction of replication and the RAD50 and RAD52 genes." Mol. Cell. Biol.15. 5203-5213 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Araki H.: "Dpb11, involoved in S-phase progression and checkpoint control interacts with DNA polymease II(ε)in Saccharomyces cerevisiae." Proc. Natl. Acad. Sci., U. S. A.92. 11791-11795 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Sugimoto K.: "Rfc5, a small subunit of replication factor C complex, couples DNA replication and mitosis in bdding yeast." Proc. Natl. Acad. Sci., U. S. A.93(in press). (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Shimizu, K.: "Purification and characterization of DNA helicase III from the yeast Saccharomyces cerevisiae." J.Biol.Chem.268. 9578-9584 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Morrison, A.: "Pathway of error correction in S.cerevisiae." EMBO J.12. 1467-1473 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Morrison, A.: "DNA polymerase II,the epsilon polymerase of Saccharomyces cerevisiae." Prog.Nucleic Acid Res.Mol.Biol.46. 93-120 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Shimizu, K.: "Purification and characterization of a new DNA polymerase from budding yeast Saccharomyces cerevisiae." J.Biol.Chem.268. 27148-27153 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Morrison, A.: "The 3' *5' exonucleases of both DNA polymerases delta and epsilon participate in correcting errors of DNA replication in Saccharomyces cerevisiae." Mol.Gen.Genet.242. 289-296 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Noskov, V.: "The RFC2 gene encoding a subunit of Replication Factor C of Saccharomyces cerevisiae." Nucleic Acids Res.22. 1527-1535 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Leem, S.-H.: "The yeast Saccharomyces cerevisiae DNA polymerase IV : possible involvement in double-strand break DNA repair." Nucleic Acids Res.22. 3011-3017 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Sugino, A.: "Yeast DNA polymerases and their role at the replication fork." Trends in Biochemical Sciences. 20. 319-323 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tran, H.T.: "Replication slippage between distant short repeats in Saccharomyces cerevisiae depends on the direction of replication and the RAD50 and RAD52 genes." Mol.Cell.Biol.15. 5607-5617 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Araki, H.: "Dpb11, involved in S-phase progression and checkpoint control, interacts with DNA polymerase II (epsilon) in Saccharomyces cerevisiae." Proc.Natl.Acad.Sci., USA. 92. 11791-11795 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Sugimoto, K.: "Rfc5, a small subunit of replication factor C complex, couples DNA replication and mitosis in budding yeast." Proc.Natl Acad.Sci., USA. 93 (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Sugino,A.: "Yeast DNA polymerases and their role at the replication fork." Trends in Biochemical Sciences. 20. 319-323 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Tran,H.T.,et al.: "Replication slippage between distant short repeats in Saccharomyces cerevisiae depends on the direction of replication and the RAD50 and RAD52 genes." Mol. Cell. Biol.15. 5203-5213 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Araki,H.,et al.: "Dpbll, involved in S-phase progression and checkpoint control, interacts with DNA polymerase II(ε) in Saccharomyces cerevisiae." Proc. Natl. Acad. Sci. U. S. A.92. 11791-11795 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Sugimoto,K.,et al.: "Rfc5,a small subunit of replication factor C complex, couples DNA replication and mitosis in budding yeast." Proc. Natl. Acad. Sci., U. S. A.93(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Morrison,Alan: "DNA Polymerase II,the Epsilon Polymerase of Saccharomyces cerevisiae" Prog.in Nucleic Acid Res. Mol.Biol.46. 93-120 (1993)

    • Related Report
      1994 Annual Research Report
  • [Publications] Morrison,Alan: "The 3′→5′ exonucleases of both DNA polymerases δ and ε participate in correcting errors of DNA replication in Saccharomyces cerevisiae" Mol.Gen.Genet.242. 289-296 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Noskov,Vladimir: "The RFC2 gene encoding a subunit of replication factor C of Sacchoromyces cerevisiae" Nucleic Acids Res.22. 1527-1535 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Leem,Sun-Hee: "The yeast Saccharomyces cerevisiae DNA polymerase IV:possible involvement in double strand break DNA repair" Nucleic Acids Res.22. 3011-3017 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Kikuo Shimizu: "Purification and characterization of DNA helicase III from the yeast Saccharomyces cerevisiae" Journal of Biological Chemistry. 268. 9578-9584 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Kikuo Shimizu: "Purification and characterization of a new DNA polymerase from budding yeast Saccharomyces cerevisiae" Journal of Biological Chemistry. 268. 27148-27153 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Alan Morrison: "The 3'→5' exonucleases of both DNA polymerases δ and ε participate in correcting errors of DNA replication in Saccharomyces cerevisiae" Molecular and General Genetics. (印刷中). (1994)

    • Related Report
      1993 Annual Research Report

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Published: 1993-04-01   Modified: 2016-04-21  

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