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Exploitation of a new method of genetic analysis for quantitative characters in rice using RAPD

Research Project

Project/Area Number 05454040
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Breeding science
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

TAKATOSHI Tanisaka  Kyoto Univ., Fac.of Agric.Associate Professor, 農学部, 助教授 (80026591)

Co-Investigator(Kenkyū-buntansha) INOUE Hiromo  Kyoto Univ., Fac.of Agric.Instructer, 農学部, 助手 (40260616)
NAKAZAKI Tetsuya  Kyoto Univ., Fac of Agric.Instructer, 農学部, 助手 (60217693)
OKUMOTO Yutaka  Kyoto Univ., Fac.of Agric.Lecturer, 農学部, 講師 (90152438)
Project Period (FY) 1993 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥6,700,000 (Direct Cost: ¥6,700,000)
Fiscal Year 1995: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1994: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 1993: ¥4,300,000 (Direct Cost: ¥4,300,000)
Keywordsrice / quantitative character / RAPD / mutation / gene analysis
Research Abstract

Out of a large number of heading-time, culm length and glume shape mutants which were induced from Japanese rice varieties by mutagenic treatments or the action of the mutator, 100 wereselected and analyzed for the mutant genes. The results indicated that many of the mutants were controlled by a single mutant gene. Of the detected mutant genes for heading time, the majority of the early-heading genes were recessive, whereas the majority of the late-heading genes were dominant. As for the short culm mutant genes, no dominant genes were detected. The genomic DNAs were extracted from the mutants harboring a single mutant gene by CTAB method, then amplified by PCR technique using about 450 kinds of primers to detect the RAPD (random amplified polymorphic DNA) between the mutants and the original variety. Specific DNA bands were observed in about 30% of the mutants. Each primer rarely produced the specific band : the probability of producing the specific band was estimated to be about 10^<-2>. This suggested that the genetic background of a mutant is much similar to that of the original variety. In the F_2 populations from the crosses of the mutants having the specific bands to their respective original varieties, whether the specific bands cosegregate with the mutant genes or not was examined. Three specific DNA bands proved to cosegreagate with mutant genes, but the other 23 bands seemed not to cosegregate with mutant genes. Considering the results of RFLP analysis practiced for the same materials, these results indicate that RAPD is more effective than RFLP in practicing the genetic analysis of quantitative characters in rice, though the PCR technique should be improved to utilize the RAPD in practical breeding.

Report

(4 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • 1993 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] Okumoto, Y.: "Difference of the heading-time genes of a rice variety Taichung 65 from those of Japanese rice varieties." Proc. of the 7th Congr. of SABRAO. 131-138 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Nakazaki, T.: "RFLP analysis for anthocyanin pigmentation genes of a mutant line in rice" Proc. of the 7th Congr. of SABRAO. 459-465 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tanisaka, T.: "Two useful semidwarfing genes in an induced short-culm mutant line HS90 of rice (Oryza sativa L.)." Breeding Science. 44. 397-403 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Arzate Fernandez, A. M.: "Development of diploid and triploid hybrids between Lilium longiflorum and L. concolor by ovary slice culture." Plant Breeding. 115(in press). (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Okumoto, Y.: "Photoperiod insensitivity gene essential to the varieties grown in the northern limit vegion of poddy rice(Oryza sativa L.)cultivation." Euphytica. 86(in press). (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tanisaka, T.: "Gene analysis of induced mutations in rice." Gamma Field Symposia. 34(in press). (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 谷 坂 隆 俊: "植物遺伝育種学実験法" 朝倉書店, 157 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Okumoto, Y., H.Inoue and T.Tanisaka: "Difference of the heading-time genes of a rice variety Taichung 65 from those of Japanese rice varieties." Proc.of the 7th Congr.of SABRAO. 131-138 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Nakazaki, T., H.Yamagata, M.Yamamoto, K.Ichitani and T.Tanisaka: "RFLP analysis for anthocyanin pigmentation genes of a mutant line in rice." Proc.of the 7th Congr.of SABRAO. 459-465 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tanisaka, T., N.Takemori, T., Yabu, H.Egashira, Y.Okumoto and H.Yamagata: "Two useful semidwarfing genes in an induced shortculm mutant line HS90 of rice (Oryza sativa L.)." Breeding Science. 44(4). 397-403 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Arzate Fernandez, A.M.: "Development of diploid and triploid hybrids between Lilium longiflorum and L.concolor by ovary slice culture." Plant Breeding. 115 (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Okumoto, Y., K.Ichitani, H.Inoue and T.Tanisaka: "Photoperiod insensitivity gene essential to the varieties grown in the northern limit region of paddy rice (Oryza satival L.) cultivation." Euphytica. 86 (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Ichitani K., Y.Okumoto and T.Tanisaka: "Heading-time genes controlling the photoperiod insensitivity of a rice variety Norin 20." Rice Genetics. III (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Okumoto, Y., H.Inoue, K.Ichitani and T.Tanisaka: "Effects of three heading time gene Ioci, Se-1, E1 and Ef-1, on the varietal difference of japonica-type rice." Rice Genetics. III (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tanisaka, T.: "Gene analysis of induced mutations in rice." Gamma Field Symposia. 34 (in press).

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Arzate Fernandez, A. M.: "Development of Diploid and triploid hybrids between Lilium Longiflorum and L. Concolar by ovary slice culture" Plant Breeding. 115(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Okumoto, Y.: "Photoperiod insensitivity gene essntial to the varieties grown in the northern limit region of paddy rice (Oryza sativa L.) cultivation" Euphytica. 86(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ichitani,K.: "Heading-time genes controlling the photoperiod insensitivity of a rice variety Norin 20" Rice Genetics. 3(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Okumoto, Y.: "Effects of three heading-timn gene loci., Se-1, E1 and Ef-1, on the varietal difference of japonica-type rice" Rice Genetics. 3(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Tanisaki, T.: "Gene anaiysis of induced mutations in rice" Gamma Field Symposia. 34(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] 寺石政義: "RLGS(Restriction Landmark Genomic Scanning method)によるイネmutator特異的DNAスポットの探索" 近畿作育研究. 41(印刷中). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] 寺石政義: "イネmutatorの育種的利用に関する研究8.易変遺伝子のRFLPマッピング" 育種学雑誌. 44(別1). 311 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 薮季仁: "半矮性突然変異遺伝子d-60およびsd-1の根の発育に及ぼす効果" 育種学雑誌. 44(別2). 220 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Okumoto,Y.: "Difference of the heading-time fenes of a rice variety taichung 65 from those of Japanese rice varieties." Proc.of the 7th Internatl.Congr.of SABRAO. 131-138 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakazaki,T: "RFLP analysis for anthocyanin pigmemtation genes of a mutant line in rice." Proc.of the 7th Internatl.Congr.of SABRAO. 459-466 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Tanisaka,T.: "Two useful semidwarfing genes in a short-culum mutatntline HS90 of rice(OryzasativaL.)." Breeding Science. 44. 397-403 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 谷坂隆俊: "植物遺伝育種学実験法" 朝倉書店, 157 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] 寺石政義: "イネmutatorの育種的利用に関する研究7.細粒系統に出現する粒形キメラの発現様式" 育種学雑誌. 43(別2). 270 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] 寺石政義: "イネmutatorの育種的利用に関する研究8.易変遺伝子のRFLPマッピング" 育種学雑誌. 44(別1)(印刷中). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nakazaki,T.: "RFLP analysis for anthosyanin pigmentation genes of a mutant line in rice." Proc.of the 7th Internatl.Congr.of SABRAO. (in press). (1994)

    • Related Report
      1993 Annual Research Report

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Published: 1993-04-01   Modified: 2016-04-21  

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