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Analysis of chromatin structure and gene function of chicken sex chromosomes

Research Project

Project/Area Number 05454068
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 応用微生物学・応用生物化学
Research InstitutionTOHOKU UNIVERSITY

Principal Investigator

MIZUNO Shigeki  Tohoku University, Dept. Applied Biol. Chem., Professor, 農学部, 教授 (90112903)

Co-Investigator(Kenkyū-buntansha) HARATA Masahiko  Tohoku University, Dept. Applied Biol. Chem., Assistant, 農学部, 助手 (70218642)
Project Period (FY) 1993 – 1994
Project Status Completed (Fiscal Year 1994)
Budget Amount *help
¥6,700,000 (Direct Cost: ¥6,700,000)
Fiscal Year 1994: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1993: ¥4,700,000 (Direct Cost: ¥4,700,000)
KeywordsChicken / Sex Chromosome / W Chromosome / Z Chromosome / Heterochromatin / Sex Chromosome-speicific Library / Genomic Library / Immunoglobulin Superfamily / 免疫グロブリンスーパーファミリー遺伝子 / 細胞質アコニターゼ遺伝子
Research Abstract

Constitution of chicken sex chromosomes is ZW for female and ZZ for male. About 2/3 of the W chromosome and a terminal region of the Z chromosome are heterochromatic. Two W-chromosome-specific repetitive DNA sequences, XhoI family and EcoRI family, are major constituents of the W heterochromatin, but nature of the Z-terminal heterochromatin is unknown. In this study, 1) a genomic clone pCHZTH8 containing about 13kb genomic fragment was obtained from the female chicken genomic library. Fluorescence in situ hybridization (FISH), Southern blot hybridization and nucleotide sequencing revealed that this cloned sequence was a part of the macrosatellite DNA localized in the Z-terminal heterochromatin and that most part of this sequence was specific to the genus Gallus. 2) Although about 20 phenotypes are mapped to the Z chromosome, molecular-level information has not been available. We demonstrated by cDNA cloning and FISH that ZOV3 (a gene belonging to the immunoglobulin superfamily) and IREBP (chicken homolog of iron responsive element binding protein) were localized on different arms of the Z chromosome. 3) Except for the above two repetitive families, W chromosome-specific DNA sequences are unknown. We constructed a W chromosome-specific genomic library by applying laser microdissection and random PCR amplification. Two clones containing W-specific non-repetitive sequences (CW01 and CW50) were obtained. A female chicken genomic library was screened with CW01 and CW50, and genomic clones convering two genomic regions of about 25-kb each, containing the CW01 and CW50 sequences, respectively, were obtained.

Report

(3 results)
  • 1994 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • Research Products

    (10 results)

All Other

All Publications (10 results)

  • [Publications] Noriyuki Suka: "W-heterochromatin of chicken;its unusual DNA components,late replication,and chromatin structure" Genetica. 88. 93-105 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Yasushi Saitoh: "Identification and localization of two genes on the chicken Z chromosome:implication of evolutionary conservation of the Z chromosome among avian species" Chromosome Res.1. 239-251 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Shigeki Mizuno(分担執筆): "Manipulation of the Avian Genome(Robert J.Etches and Ann M.V.Gibbins,eds.)" CRC Press,Inc., 322 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Noriyuki Suka: "W-heterochromation of chicken ; its unusual DNA components, late replication, and chromatin structure" Genetica. 88. 93-105 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] YASUSHI Saitoh: "Identification and localization of two genes on the chicken Z chromosome : implication of evolutionary conservation of the Z chromosome among avian species" Chromosome Res.1. 239-251 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Shigeki Mizuno: "Sex-specific DNA sequences in Galliformes and their application to the study of sex differentiation" In : Manipulation of the Avian Genome (R.J.Etches and A.M.V.Gibbins, eds.), CRC Press. 257-274 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Masahiko Harata: "An essential gene of Saccharomyces cerevisiae coding for an actin-related protein." Proc.Natl.Acad.Sci.USA. 91. 8258-8262 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Osamu Nakabayashi: "The cDNA cloning and transient expression of a chicken gene encoding a 3β-hydroxy-steroid dehydrogenase/Δ5→4 isomerase unique to major to steroidogenic tissues" Gene. (in press). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Noriyuki Suka: "W-heterochromatin of chicken;its unusual DNA components,late replication,and chromatin structure" Genetica. 88. 93-105 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Yasushi Saitoh: "Identification and localization of two genes on the chicken Z chromosome: implication of evolutionary conservation of the Z chromosome among avian species" Chromosome Res.1. 239-251 (1993)

    • Related Report
      1993 Annual Research Report

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Published: 1993-04-01   Modified: 2016-04-21  

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