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Development of High Performance DNA Sequencer Using Laser-Induced Capillary Vibration Method

Research Project

Project/Area Number 05558083
Research Category

Grant-in-Aid for Developmental Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Structural biochemistry
Research InstitutionThe University of Tokyo

Principal Investigator

WATANABE Kimitsuna (1995)  The University of Tokyo, School of Engineering, Professor, 大学院・工学系研究科 (00134502)

北森 武彦 (1993-1994)  東京大学, 工学部, 助教授 (60214821)

Co-Investigator(Kenkyū-buntansha) MIURA Kin-ichiro  Gakushuin University, Institute for Biomolecular Science, Professor, 生命分子化学研究所, 教授
原田 明  東京大学, 工学部, 助手 (90222231)
渡辺 公綱  東京大学, 工学部, 教授 (00134502)
澤田 嗣郎  東京大学, 工学部, 教授 (90011105)
Project Period (FY) 1993 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥19,000,000 (Direct Cost: ¥19,000,000)
Fiscal Year 1995: ¥4,500,000 (Direct Cost: ¥4,500,000)
Fiscal Year 1994: ¥6,000,000 (Direct Cost: ¥6,000,000)
Fiscal Year 1993: ¥8,500,000 (Direct Cost: ¥8,500,000)
KeywordsDNA sequencer / capillary electrophoresis / laser-induced capillary vibration method / gene diagnosis / immune diagnosis / biological materials / ultratrace analysis / ultrasensitive detection / キャピラリー電気泳動法 / 超微量物質 / パルス発振 / レーザー光 / ゲル / 塩基
Research Abstract

As can be seen from Human Genome Project, acceleration of analysis time and improvement of sensitivity will promote both fundamental and application study. In recent years, capillary zone electrophoresis (CZE) has attracted much attention as a separation tool for ultramacro amounts of components. however, CZE has no detection method sensitive enough for ultramicro amounts of separated componts, and it has been difficult to apply to ultramicro amounts of materials such as DNA fragments. We proposed capilary vibration induced by laser (CVL) method as a highly sensitive on-column detector for CZE,and attomole amounts of DNA fragments were quantitatively detected using the CVL method. In this study we aimed at developing a novel DNA sequencing method with higher separation efficiency and sensitivity by one order of magnitude by maans of analytical chemistry and molecular biology.
This year is the last year of the three year research. In the previous year, we developed pulsed laser-induced stationary wave CVL detection method. We applied the developed method to detection of DNA fragments, and the detection limit of absolute amount was 16 amol. The method was also applied to gene diagnosis, and DNA fragments which was considered to have relation with heart disease or Alzheimer's disease were sensitively detected. These results suggested feasibility of development of gene diagnosis, which is a key to preventive medicine and early detection. Moreover, we applied to high performance immune diagnosis, we investigated on simple method for separating immunologically bound samples and free samples, and developed more sensitive and simpler immunoassay method than the conventional method. Attomole amounts of biological materials were detected with the same or higher sensitivity than the methods using fluorescent tags or radioisotopes. Realization of ultrasensitive detection without labeling process will lead to open a new application field in DNA analysis.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • Research Products

    (9 results)

All Other

All Publications (9 results)

  • [Publications] Tamao Odakc, Takchiko Kitamori, Tsugno Sawada: "Photothermal Effects in a Capillary and Optimum Conditions for Absorbance Detection of Capillary Elcctrophoresis." Analytical Chemistry. 67. 1458-1463 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tamao Okada, Takehiko Kitamori, Tsuguo Sawada: "Phototermal Effects in a Capillary and Optimum Conditions for Absorbance Detection of Capillary Electrophoresis" Analytical Chemistry. 67. 1458-143 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Tamao Odake, Takehiko Kitamori, Tsuguo Sawada: "Photothermal Effects in a Capillary and Optimum Conditions for Absorbance Detection of Capillary Electrophoresis." Analytical Chemistry. 67. 1458-1463 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] T.Kitamori,et al.: "Laser Photoacoustic and Photothermal Spectroscopies as Novel Characterization Method for Microparticles" Polymer International. 30. 451-453 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] M.Harada,et al.: "Effect of Probe Beam Offset on Quantitative Measurement in Photothermal Beam Diflection Spectroscopy" Analytical Chemistry. 65. 2181-2183 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Chao-Yi Tu,et al.: "Ultrasensitive Heterogeneous Immunoassay Using Photothermal Deflection Spectroscopy" Analytical Chemistry. 65. 3631-3635 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Odake,et al.: "Photothermal Effects in Capillary and Optimal Conditions for Ultrasensitive Determination" Analytical Chemistry. (発表予定). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Odake,et al.: "Ultratrace Detection of Capillary Gel Electrophoresis by Laser-Induced Capillary Vibration" Analytical Chemistry. (発表予定). (1994)

    • Related Report
      1993 Annual Research Report
  • [Publications] T.Kitamori,et al.: "Capillary Flow Injection Analysis" Analytical Chemistry. (発表予定). (1994)

    • Related Report
      1993 Annual Research Report

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Published: 1993-04-01   Modified: 2016-04-21  

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