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Development of a cell-free translation system capable of producing functional proteins in high yield.

Research Project

Project/Area Number 05558085
Research Category

Grant-in-Aid for Developmental Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Functional biochemistry
Research InstitutionNagoya University

Principal Investigator

ENDO Toshiya  Nagoya University, Faculty of Science, Professor, 理学部, 教授 (70152014)

Co-Investigator(Kenkyū-buntansha) NAKAI Masato  Nagoya University, Faculty of Science, Research Associate, 理学部, 助手 (90222158)
Project Period (FY) 1993 – 1994
Project Status Completed (Fiscal Year 1994)
Budget Amount *help
¥7,000,000 (Direct Cost: ¥7,000,000)
Fiscal Year 1994: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 1993: ¥5,000,000 (Direct Cost: ¥5,000,000)
KeywordsA cell-free translation system / E.coli / Yeast / Molecular chaperone / hsp70 / Ydjlp / RNAポリメラーゼ
Research Abstract

Expression of alien genes in living cells often faces a number of limitations. The produced proteins may be unstable in cells, or even toxic to host cells. It is generally difficult to introduce unnatural amino acids into proteins synthesized in living cells. Such limitations could be avoided if translation were possible in cell-free systems. However different version of cell-free systems available today suffer from low yield of the protein product. Some proteins synthesized in a cell-free system hardly fold into native conformations because of the presence of molecular chaperones that stabilize unfolded states of the proteins. In the present project, we aimed at developing a cell-free translation system with (1) improved yield (e.g.as much as 10-100-fold) and (2) improved abilities to produce functional proteins.
For improving the yield of protein synthesis, we attained yield of as much as 250 mug of proteins per 1 mL of a reaction mixture by optimizing the compositions of reaction mixtures etc.in the cell-free translation system with E.coli S30 extracts. For improving abilities to produce functional proteins, we have established methods to manipulate the amounts of molecular chaperones in the cell extracts for in vitro protein synthesis. For example, we could deplete 85% of Ssa proteins (cytosolic hsp 70) or 100% of Ydjlp (cytosolic DnaJ homolog) from yeast cell extracts for cell-free translation. Although depletion of these molecular chaperones decreased the yield of protein synthesis, but it still allowed us to characterize the conformation/functions of produced proteins.

Report

(3 results)
  • 1994 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • Research Products

    (42 results)

All Other

All Publications (42 results)

  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic hsp70 depends on the amphiphilicity of the presequence." J.Biol.Chem.271. 4161-4167 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] N.Pfanner et al.: "Uniform nomenclature for the protein transport machinery of the mitochondrial membranes." Trends Biochem. Sci.21. 51-52 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Endo et al.: "Mitochondrial presequences can induce aggregation of unfolded proteins." FEBS Lett.359. 93-96 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Mitochondrial receptor complex protein. The intermembrane-space domain of yeast MAS17 is not essential for its targeting or function." J.Biol,Chem.270. 30571-30575 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Endo et al.: "Avidin fusion protein as a tool to generate a stable translocation intermediate spanning the mitochondrial membranes." J.Biochem.118. 753-759 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Nohara et al.: "Isolation and characterization of the cDNA for pea chloroplast SecA. Evolutionary conservation of the bacterial-type SecA-dependent protein transport within chloroplasts." FEBS Lett.364. 305-308 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai and T.Endo: "Identification of yeast MAS17 encoding the functional counterpart of the mitochondrial receptor complex protein MOM22 of Neurospora crassa." FEBS Lett.357. 202-206 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification of the SecA protein homolog in pea chloroplasts and its possible involvement in thylakoidal protein transport." J.Biol.Chem.269. 31338-31341 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Endo et al.: "Chloroplast protein inport: chloroplast envelopes and thylakoids have different abilities to unfold proteins." Eur.J.Biochem.225. 403-409 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification and characterization of the SecA protein homologue in the cyanobacterium Synechococcus PCC7942." Biochem. Biophys. Res.Commun.200. 844-851 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Ygelp, a eukaryotic GrpE homolog,is localized in the mitochondrial matrix and interacts with motochondrial hsp70." Biochem. Biophys. Res.Commun.200. 435-442 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M. Nakai et al.: "The acidic regions of cytochrome c_1 are essential for ubiquinol-cytochrome c reductase activity in yeast cells lacking the acidic QCR6 protein." J.Biochem.114. 919-925 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Intramitochondrial protein sorting: isolation and characterization of the yeast MSP1 gene which belongs to a novel family of putative ATPases." J.Biol.Chem.268. 24262-24269 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "The Bcl-2 protein is inserted into the outer membrane but not into the inner membrane of rat liver mitochondria in vitro." Biochem. Biophys. Res.Commun.196. 233-239 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Cloning of the YAP19 gene encoding a putative yeast homolog of AP19,the mammalian small chain of the clathrin-assembly proteins." Biochim. Biophys. Acta. 1174. 282-284 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "SecY protein is localized in both the cytoplasmic and thylakoid membranes in the cyanobacterium Synechococcus PCC7942." Biochem. Biophys. Res.Commun.193. 228-234 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic hsp70 depends on the amphiphilicity of the presequence" J.Biol.Chem.271. 4161-4167 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] N.Pfanner et al.: "Uniform nomenclature for the protein transport machinery of the mitochondrial membranes" Trends Biochem.Sci.21. 51-52 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Mitochondrial receptor complex protein. The intermembrane-space domain of yeast MAS17 is not essential for its targeting or function" J.Biol.Chem.270. 30571-30575 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Endo et al.: "Avidin fusion protein as a tool to generate a stable translocation intermediate spanning the mitochondrial membranes." J.Biochem.118. 753-759 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Endo et al.: "Mitochondrial presequences can induce aggregation of unfolded proteins" FEBS Lett.359. 93-96 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Nohara et al.: "Isolation and characterization of the cDNA for pea chloroplast SecA.Evolutionary conservation of the bacterial-type SecA-dependent protein transport within chloroplasts." FEBS Lett.364. 305-308 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai and T.Endo: "Identification of yeast MAS17 encoding the functional counterpart of the mitochondrial receptor complex protein MOM22 of Neurospora crassa." FEBS Lett.357. 202-206 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification of the SecA protein homolog in pea chloroplasts and its possible involvement in thylakoidal protein transport." J.Biol.Chem.269. 31338-31341 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] T.Endo et al.: "Chloroplast protein import : chloroplast envelopes and thylakoids have different abilities to unfold proteins." Eur.J.Biochem.225. 403-409 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification and characterization of the SecA protein homologue in the cyanobacterium Synechococcus PCC7942" Biochem.Biophys.Res.Commun.200. 844-851 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Ygelp, a eukaryotic GrpE homolog, is localized in the mitochondrial matrix and interacts with mitochondrial hsp70" Biochem.Biophys.Res.Commun.200. 435-442 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai, T.Endo, T.Hase et al.: "The acidic regions of cytochrome c_1 are essential for ubiquinol-cytochrome c reductase activity in yeast cells lacking the acidic QCR6 protein" J.Biochem.114. 919-925 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Intramitochondrial protein sorting : isolation and characterization of the yeast MSP1 gene which belongs to a novel family of putative ATPases" J.Biol.Chem.268. 24262-24269 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "The Bc1-2 protein is inserted into the outer membrane but not into the inner membrane of rat liver mitochondria in vitro" Biochem.Biophys.Res.Commun.196. 233-239 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Cloning of the YAP19 gene encoding a putative yeast homolog of AP19, the mammalian small chain of the clathrin-assembly proteins" Biochim.Biophys.Acta. 1174. 282-284 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] Nakai,M.et al.: "Ygelp,a eukaryotic GrpE homolog,is localized in the mitochondrial matrix and interacts with mitochondrial hsp70." Biochem.Biophys.Res.Commun.200. 435-442 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakai,M.et al.: "Identification and characterization of the SecA protein homologue in the cyanobacterium Synechococcus PCC7942." Biochem.Biophys.Res.Commun.200. 844-851 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Endo,T.et al.: "Chloroplast protein import:chloroplast envelopes and thylakoids have different abilities to unfold proteins." Eur.J.Biochem.225. 403-409 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakai,M.et al.: "Identification of the SecA protein homolng in pea chloroplasts and its possible involvement in thylakoidal pratein transport." J.Biol.Chem.269. 31338-31341 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakai,M.& Endo,T.: "Identification of yeast MAS17 encoding the functional counterpart of the mitochondrial receptor complex protein MOM22 of N.C." FEBS Lett.357. 202-206 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Endo,T.et al.: "Mitochondrial presequences can induce aggregation of unfolded proteins." FEBS Lett.359. 93-96 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakai,M.et al: "Sec Y protein is localized in both the cytoplasmic and thylakoid membranes in the cyanobacterium Synechococcus PCC7942" Biochem.Biophys.Res.Commun.193. 228-234 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nakai,M.et al: "Cloning of the YAP19 gene encoding a putative yeast homolog of AP19,the mammalian small chain of the clathrin-assembly proteins." Biochem.Biophys.Acta. 1174. 282-284 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nakai,M.et al: "Intramitochondrial Protein Sorting:isolation and characterization of the yeast MSP1 gene which belongs to a novel family of putatire ATPases" J.Biol.Chem.268. 24262-24269 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nakai,M.et al: "The BCl-2 Protein is in serted into the outer membrane but not into the inner membrane of rat liver mitochondria in vitro." Biochem.Biophys.Res.Commun.196. 233-239 (1993)

    • Related Report
      1993 Annual Research Report
  • [Publications] Nakai,M.et al: "Acidic regions of cytochrome C_1 are essential for ubiquinol-cytochrome C reductase activity in yeast cells lacking the acidic QCR6 protein" J.Biochem.114. 919-925 (1993)

    • Related Report
      1993 Annual Research Report

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Published: 1993-04-01   Modified: 2016-04-21  

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