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Construction of physical map chicken W chromosome

Research Project

Project/Area Number 05660333
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field Applied animal science
Research InstitutionKagoshima University

Principal Investigator

HASHIGUCHI Tsutomu  Faculty of Agriculture, Kagoshima University, Rrofessor, 農学部, 教授 (80041614)

Co-Investigator(Kenkyū-buntansha) OKAMOTO Shin  Faculty of Agriculture, Kagoshima University , Associate Rrofessor, 農学部, 助教授 (70158814)
MAEDA Yoshizane  Faculty of Agriculture, Kagoshima University, Associate Professor, 農学部, 教授 (50041661)
Project Period (FY) 1993 – 1994
Project Status Completed (Fiscal Year 1994)
Budget Amount *help
¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 1994: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1993: ¥1,400,000 (Direct Cost: ¥1,400,000)
KeywordsChicken / Genome library / W chromosome / Reiterated sequence / DNA fingerprinting / Restriction enzyme cleavage map / W染色体 / コンティグマップ / コスミドベクター / ゲノムライブラリー / ドットハイブリダイゼーション / サザンハイブリダイゼーション
Research Abstract

Chicken genomic library which was constructed with both of restriction enzyme Sau3A I digest of female chicken genomic DNA and cosmid vector super Cos1 were analyzed with two chicken W chromosome specific reiterated sequences pUGD0601 (a 0.7kb unit of the Xho I family) and pUGD1201 (a 1.2kb unit of the EcoR I family). It was detected the chicken W chromosome specific DNA library with 900 clone of Xho I family and 600 clone EcoR I family, respectively. In the results of dot blot hybridization analysis, the 85% clone had W chromosome specific sequences, and it was suggested that this library covered 72% of the amount of chicken W chromosomal genome. The restriction enzyme cleavage map of each clone were constructed by southern blot hybridization analysis among the cosmid clone and short and long arm of the super Cos 1, and analyzed each clone by using DNA finger printing. These results suggested that the mean of the size of insert was about 40kb, and these library were equivalent to 2.1% of whole W chromosome genome.

Report

(3 results)
  • 1994 Annual Research Report   Final Research Report Summary
  • 1993 Annual Research Report
  • Research Products

    (13 results)

All Other

All Publications (13 results)

  • [Publications] H.Yamashita,T.Hashiguchi et al.: "Genetic Relationships Among Domestic and Jungle Fowls Revealed by DNA Fingerprinting Analysis." Jpn.Poult.Sci.31. 335-344 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita,T.Hashiguchi et al.: "Population Differentiation of Japanese Native Horse DNA Fingerprinting." J.Equine.Sci.5(発表予定). (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita,T.Hashiguchi et al.: "DNA Fingerprinting Analysis of Native and Red Jungle Fowls in Fiji and Western Samoa." Jpn.Poult.Sci.32(発表予定). (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita,T.Hashiguchi et al.: "Genetic Fingerprinting in Chicken by Amplification of Polymorphic DNA." Biochem.Genet.33(発表予定). (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita, T.Hashiguchi et al.: "Genetic Relationships among domestic and jungle fowls revealed by DNA fingerprinting analysis." Jpn.Poult.Sci.31. 335-344 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita, T.Hashiguchi et al.: "Population differentiation of Japanese native horse DNA fingerprinting" J.Equine Sci.5 : (in press). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita, T.Hashiguchi et al.: "DNA fingerprinting analysis of native and red jungle fowls in Fiji and Western Samoa." Jpn.Poult. Sci.32 : (in press). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita, T.Hashiguchi et al.: "Genetic fingerprinting in chicken by amplification of polymorphic DNA." Biochem.Genet.33 : (in press). (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1994 Final Research Report Summary
  • [Publications] H.Yamashita,T.Hashiguchi et al.: "Genetic Relationships Among Domestic and Jungle Fowls Revealed by DNA Fingerprinting Analysis." Jpn.Poult.Sci.31. 335-344 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] H.Yamashita,T.Hashiguchi et al.: "Population Differentiation of Japanese Native Horse DNA Fingerprinting." J.Equine.Sci.5(発表予定). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] H.Yamashita,T.Hashiguchi et al.: "DNA Fingerprinting Analysis of Native and Red Jungle Fowls in Fiji and Western Samoa." Jpn.Poult.Sci.32(発表予定). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] H.Yamashita,T.Hashiguchi et al.: "Genetic Fingerprinting in Chicken by Amplification of Polymorphic DNA." Biochem.Genet.33(発表予定). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] H.Yamashita and T.Hashiguchi: "Genetic Relationships Among Domestic and Jungle Fowls Ushing Population DNA Fingerprinting" Jap.Poul.Sci.(発表予定)32. (1994)

    • Related Report
      1993 Annual Research Report

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Published: 1993-04-01   Modified: 2016-04-21  

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