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Transmembrane Traffic of Proteins with Unnatural Amino Acids

Research Project

Project/Area Number 06044091
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research InstitutionNagoya University

Principal Investigator

ENDO Toshiya  Nagoya University, Faculty of Science, Professor, 理学部, 教授 (70152014)

Co-Investigator(Kenkyū-buntansha) SCHULTZ Peter  University of California, Department of Chemistry, Professor, 化学教室, 教授
KANAMORI Takashi  Nagoya University, Faculty of Science, JSPS Research Fellow, 理学部, 学振特別研究員
NISHIKAWA Shun-ichi  Nagoya University, Faculty of Science, Research Associate, 理学部, 助手 (10252222)
NAKAI Masato  Nagoya University, Faculty of Science, Research Associate, 理学部, 助手 (90222158)
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥6,800,000 (Direct Cost: ¥6,800,000)
Fiscal Year 1995: ¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 1994: ¥3,400,000 (Direct Cost: ¥3,400,000)
KeywordsUnnatural Amino Acids / Mitochondria / Precursor / Translocation across Membranes
Research Abstract

Most mitochondrial proteins are synthesized as precursor proteins in the cytosol and are subsequently important into mitochondria. Translocation of precursor proteins across the mitochondrial outer and inner membranes requires coordinated functions of the translocation machineries in the two membranes. In order to analyze the interactions between components of the translocation machineries and translocating precursor proteins in details, we site-specifically incorporated an unnatural amino acid with a photoreactive cross-linking group, pBzPhe.
We used pSu9 (1-69)-DHFR consisting of the presequence of the F_0-ATPase subunit 9 fused to mouse DHFR as a model precursor protein. Six mutant genes carrying the amber stop codon at specific positions along the polypeptide were constructed by in vitro mutagenesis. The mutant pSu9 (1-69)-DHFR fusion proteins (T4, A17, A29, T44, A56, and Y67) were synthesized in the presence of suppressor tRNA,which was charged with pBz-Phe, and RI-labeled Met by c … More oupled transcription/translation with rabbit reticulocyte lysate. All the proteins except for T44 were synthesized efficiently. Besides, mutant fusion proteins containing pBz-Phe could be imported into mitochondria efficiently.
Since translocation across the mitochondrial membranes require unfolding of the precursor protein, stabilization of the tertiary structure of the DHFR domain of the fusion proteins by methotrexate blocks their import into mitochondria, resulting in the formation of translocation intermediates. These translocation intermediates in transit through the translocation channels should be in close contact with the components of the translocation machineries. Therefore irradiation of the intermediates will lead to cross-linking of the fusion proteins with the components of the translocation machineries. Indeed, we could observe cross-linked products which are dependent on the positions of introduced pBz-Phe. These forms may represent cross-linked products between the fusion proteins and the components of the translocation machineries due to their specific interactions. Less

Report

(2 results)
  • 1995 Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (28 results)

All Other

All Publications (28 results)

  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic hsp70 depends on the amphiphilicity of the presequence." J.Biol.Chem.271. 4161-4167 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] N.Pfanner et al.: "Uniform nomenclature for the protein transport machinery of the mitochondrial membranes." Trends Biochem.Sci.21. 51-52 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Endo et al.: "Mitochondrial presequences can induce aggregation of unfolded proteins." FEBS Lett.359. 93-96 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Mitochondrial receptor complex protein. The intermembrane-space domain of yeast MAS17 is not essential for its targeting or function." J.Biol.Chem.270. 30571-3057 5 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Endo et al.: "Avidin fusion protein as a tool to generate a stable translocation intermediate spanning the mitochondrial membranes." J.BioChem.118. 753-759 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Nohara et al.: "Isolation and characterization of the cDNA for pea chloroplast SecA.Evolutionary conservation of the bacterial-type SecA-dependent protein transport within chloroplasts." FEBS Lett.364. 305-308 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai and T.Endo: "Identification of yeast MAS17 encoding the functional counterpart of the mitochondrial receptor complex protein MOM22 of Neurospora crassa." FEBS Lett.357. 202-206 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification of the SecA protein homolog in pea chloroplasts and its possible involvement in thylakoidal protein transport." J.Biol.Chem.269. 31338-31341 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Endo et al.: "Chloroplast protein import : chloroplast envelopes and thylakoids have different abilities to unfold proteins." Eur.J.Biochem.225. 403-409 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification and characterization of the SecA protein homologue in the cyanobacterium SynechococcusPCC7942." Biochem.Biophys.Res.Commun.200. 844-851 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Ygelp,a eukaryotic GrpE homolog,is localized in the mitochondrial matrix and interacts with mitochondrial hsp70." Biochem.Biophys.Res.Commun.200. 435-442 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Endo et al.: "Binding of mitochondrial presequences to yeast cytosolic hsp70 depends on the amphiphilicity of the presequence." J.Biol.Chem.271. 4161-4167 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] N.Pfanner et al.: "Uniform nomenclature for the protein transport machinery of the mitochondrial membranes." Trends Biochem.Sci.21. 51-52 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Mitochondrial receptor complex protein. The intermembrane-space domain of yeast MAS17 is not essential for its targeting or function." J.Biol.Chem.270. 30571-30575 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Endo et al.: "Avidin fusion protein as a tool to generate a stable translocation intermediate spanning the mitochondrial membranes." J.Biochem.118. 753-759 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Endo et al.: "Mitochondrial presequences can induce aggregation of unfolded proteins." FEBS Lett.359. 93-96 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Nohara et al.: "Isolation and characterization of the cDNA for pea chloroplast SecA.Evolutionary conservation of the bacterial-type SecA-dependent protein transport within chloroplasts." FEBS Lett.364. 305-308 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai and T.Endo: "Identification of yeast MAS17 encoding the functional counterpart of the mitochondrial receptor complex protein MOM22 of Neurospora crassa." FEBS Lett.357. 202-206 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification of the SecA protein homolog in pea chloroplasts and its possible involvement in thylakoidal protein transport." J.Biol.Chem.269. 31338-31341 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] T.Endo et al.: "Chloroplast protein import : chloroplast envelopes and thylakoids have different abilities to unfold proteins." Eur.J.Biochem.225. 403-409 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Identification and characterization of the SecA protein homologue in the cyanobacterium Synechococcus PCC7942." Biochem.Biophys.Res.Commun.200. 844-851 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Nakai et al.: "Ygelp, a eukaryotic GrpE homolog, is localized in the mitochondrial matrix and interacts with mitochondrial hsp70." Biochem.Biophys.Res.Commun.200. 435-442 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Nakai,M. et al.: "Ygelp,a eukaryotic GrpE homolog,is localized in the mitochondrial matrix and interacts with mitochondrial hsp70." Biochem. Biophys. Res. Commun.200. 435-442 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakai,M. et al.: "Identification and characterization of the SecA protein homologue in the cyanobacterium Synechococcus PCC7942" Biochem. Biophys. Res. Commun.200. 844-851 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Endo,T. et al.: "Chloroplast protein import: chloroplast envelopes and thylakoids have different ability to unfold proteins.21GC03:Eur. J. Biochem." 225. 403-409 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakai,M. et al.: "Identification of the SecA protein homolog in pea chloroplasts and its possible involvement in thylakoidal protein transport." J. Biol. Chem.269. 31338-31341 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Nakai,M. etal.: "Identification of yeast MAS17 encoding the functional counterpart of the mitochondrial receptor complex protein MOM22 of Neurospora classa." FEBS Lett.357. 202-206 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Endo,T. et al.: "Mitochondrial presequences can induce aggregation of unfolded proteins." FEBS Lett.359. 93-96 (1995)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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