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Structure of the New Motifs for Nucleotide-binding

Research Project

Project/Area Number 06044186
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research InstitutionKochi University

Principal Investigator

YUBISUI Toshitsugu  Kochi University, Professor, 理学部, 教授 (00019564)

Co-Investigator(Kenkyū-buntansha) ポーター トッド D.  ケンタッキー大学, 薬学部, 助教授
キャンベル ウイルバー  ミシガン工科大学, 生化学, 教授
CAMPBELL Wilbur h  Michigan Technological University, Professor
PORTER Todd d  University of Kentucky, Associate Professor
キャンベル ウイルバーH  ミシガン工科大学, 生化学, 教授
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,900,000)
Fiscal Year 1995: ¥1,900,000 (Direct Cost: ¥1,900,000)
Fiscal Year 1994: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsNucleotide-binding motif / Cytochrome b5 reductase / Nitrate reductase / Crystal structure / Mutagenesis / Cytochrome P450 reductase / ヌクレオチド / モチーフ / NADH-シトクロムb5還元酵素 / ミノ酸置換
Research Abstract

In this Joint Research Program entitled "Structure of the New Motifs for Nucleotide-binding", we studied on the structures of the nucleotide-binding motifs of human NADH-cytopchrome b5 reductase (b5R), corn nitrate reductase (NR), and rat NADPH-cyto chrome P450 reductases.
In b5R,the C-terminal beta-strand is rich in hydrophobic amino acid residues, and these residues are shown to be important from the crystal structure to stabilize the hydrohobic environment of nucleotide, FAD to bind the enzyme. Even if one of these hydrophobic amino acid residues was exchanged with Alanine, the enzyme activity was not impaired, but when it was deleted by mutagenesis, the enzyme actrivity was highly impaired. These facts indicate that those hydrophobicity around the C-terminus is important to stabilize the binding of nucleotide, FAD.
To understand the electron transfer in NR,a fusion protein of the FAD-binding domain and cytochrom b domain with NR cDNA.The fusion protein was expressed in yeast Pichia, and was purified by using an affinity chromatography on a Blue-Sepharose. The fusin protein is now applying to crystalize.
P450R contains two nucleotides, FMN and FAD,and also has a long insertion sequence (120 residues) is the N-terminal domain. To clarify the relationship between the binding of FMN and FAD,and the long insertion sequence, we are now preparing a chimera protein exchanging the N-terminal domain of P450 reductase with the N-terminal domain of b5R.

Report

(2 results)
  • 1995 Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (13 results)

All Other

All Publications (13 results)

  • [Publications] Terry E.Meyer: "Transient kinetics of Intracomplex Electron Transfer in the Human Cytochrome b5 Reductase-Cytochrome b5 System" Arch.Biochem.Biopys.318. 457-464 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yasuhiro Sagara: "Cloning and Sequence Analysis of a Full-Length cDNA of Rat Adrenodoxin" Biol.Pharm.Bull.19. 39-41 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Toshitsugu Yubisui: "Studies on the Localization of Cytochrome b5 in Adult Rat Brain" Mem.Fac.Sci.Kochi Univ.(Ser.D). 16/17. 1-6 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Guoguang Lu: "Structural Studies on Corn Nitrate Reductase Refined Structure of the Cytochrome b Reductase Fragment at 2.5A,its ADP Compl" J.Mol.Biol.248. 931-948 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Terry E.Meyer: "Transient kinetics of Intracomplex Electron Transfer in the Human Cytochrome b5 Reductase-Cytochrome b5 System" Arch.Biochem.Biopys.318. 464-457 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yasuhiro Sagara: "Cloning and Sequence Analysis of a Full-Length cDNA of Rat Adrenodoxin" Biol.Pharm.Bull.19. 39-41 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Toshitsugu Yubisui: "Studies on the Localization of Cytochrome b5 in Adult Rat Brain" Mem.Fac.Sci.Kochi Univ.(Ser.D). 16/17. 1-6 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Guoguang Lu: "Structural Studies on Corn Nitrate Reductase : Refined Structure of the Cytochrome b Reductase at 2.5A,its ADP Complex" J.Mol.Biol.248. 931-948 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yubisui,T.: "Structure and function of NADH-cytochrome b5 reductase iu relation to hereditary methemoglobinemia" Flavins and Flavoproteins. 395-404 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Shirabe,K.: "Role of flavin binding motif,RxY(T/S),of NADH-cytochrome b5 reductase in electron transfer reaction" Flavins and Flavoproteins. 405-408 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Takano,T.: "The structure of human erythrocyte NADH-cytochrome b5 reductase at 2.5A resolution" Flavins and Flavoproteins. 409-412 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Shirabe,K.: "An in-frame deletion of codon 298 of the NADH-cytochrome b5 reductase gene results in hereditary methemoglobinemia type II" J.Biol.Chem.269. 5952-5957 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Lu,G.: "Crystal structure of the FAD-containing fragment of corn nitrate reductase at 2.5A resolution" Structure. 2. 809-812 (1994)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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