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Dynamics of supramolecular biological systems by synchrotron radiation

Research Project

Project/Area Number 06302086
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section総合
Research Field Biophysics
Research InstitutionOsaka University

Principal Investigator

WAKABAYASHI Katsuzo  Osaka Univ., Fac.Engn.Sci., Dpet.Biophys.Engn, Assoc.Prof., 基礎工学部, 助教授 (00029521)

Co-Investigator(Kenkyū-buntansha) TAWADA Katsuhisa  Kyushu Univ., Fac.Sci., Dept.Biol., Assoc.Prof., 理学部, 助教授 (20029507)
TOKUNAGA Fumio  Osaka Univ., Fac.Sci., Dept.Earth and Space Sci., Prof., 教授 (80025452)
WAKABAYASHI Takeyuki  Tokyo Univ., Fac.Sci., Dept., Phys., Prof., 理学部, 教授 (90011717)
AMEMIYA Yoshiyuki  Tokyo Univ., Fac.Engn., Engn.Res.Inst., Assoc.Prof., 工学部, 助教授 (70151131)
YAGI Naoto  Tohoku Univ., Fac.Med., Dept., Pharma., Assoc.Prof., 医学部, 助教授 (80133940)
浜中 俊明  大阪大学, 基礎工学部, 助手 (60093449)
Project Period (FY) 1994 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥5,400,000 (Direct Cost: ¥5,400,000)
Fiscal Year 1996: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 1995: ¥1,900,000 (Direct Cost: ¥1,900,000)
Fiscal Year 1994: ¥2,000,000 (Direct Cost: ¥2,000,000)
Keywordsbiophysics / synchroton radiation / x-ray diffraction / electron microscope / muscle contraction / halobacterial purple membrane / bacterial flagellar / cephalopod visual cell / 細菌のベン毛
Research Abstract

Wakabayshi et al.constructed the model of F-actin bound with tropomyosin which showed the good fitness between the calculated and observed x-ray intensities from the thin filament in relaxing state, based on the crystallographic data of actin monomers. From this result, it was suggested that the structural change of the actin molecule playd important role in the contraction of muscle. Wakabayashi et al.observed successfuly the interacting actinmyosin head complex at 2 nm resolution by electron cryo-microscopy. The micrographs indicated that the relative orientation between actin and myosin molecules was not constant and the various interaction sites existed in the sliding movement. Also, Katayama et al.could obtain images of the actin-heavy meromyosin complexes on mica surfaces after the addition of ATP using a quick-freeze, freeze-fracture, deep-etch technique. The result showed that the myosin head bound to the actin filament with a broad orientational distribution and could move over the range of several actin monomers. Namba et al.studied the molecular mechanism of polymorphism of flagellar filaments by electron cryo-microscopy and x-ray fiber diffraction method. It appeared that the double tublar structure of the filament core was essential for the polymorphic ability of flagellar filaments, which is required for the swimming-tunbling of bacterial taxies. Tokunaga et al.studied the structure of the D96N mutant of bacteriorhodopsin, the intermediates of which had longer life times than the native ones, by x-ray diffraction and detected significant changes of the structure at M and N intermediates of the photocycle. Tawada et al.showed the force production by chemically crosslinked myosin-actin cross-brideges in response to MgATP depletion. They also studied the fluctuation in the translational sliding movement of microtubles by kinesin and showed that the protein friction places significant constraint on the possible mechanisms of the sliding movement.

Report

(4 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • 1994 Annual Research Report
  • Research Products

    (30 results)

All Other

All Publications (30 results)

  • [Publications] 若林克三: "X線回折による筋収縮分子機構の研究" 日本結晶学会誌. 38. 208-220 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yagi, N.: "Small-angle X-ray diffraction of muscle using undulator rediation from the Tristan main ring at KEK" J. Synchrotron Rad.3. 305-312 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kikkawa, M.: "Three-dimensional structure of the kinesin head-microtule complex" Nature. 376. 274-277 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Mimori-Kiyosue, Y.: "Direct interaction of flagellin termini essential for polymorphic ability of flagellar filament" Proc. Natl. Acad. Sci. USA. 93. 15108-15113 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Imafuku, Y.: "Fluctuation in the microtuble sliding movement driven by kinesin in vitro" Biophys. J.70. 878-886 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kamikubo, H.: "Structure of the N intermediate of bacteriorhodopsin revealed by X-ray diffraction" Proc. Natl. Acad. Sci. USA. 93. 1386-1390 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] K.Wakabayashi: "Molecular mechanism of the muscle contraction studied by x-ray diffraction" J.Cryst.Soc.Japan. 38. 208-220 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] N.Yagi: "Small-angle x-ray diffraction of muscle using undulator radiation from the Tristan main ring at KEK" J.Synchrotron Rad.3. 305-312 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] M.Kikkawa: "Three-dimensional structure of the kinesion head-microtuble complex" Nature. 376. 274-277 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Y.Mimori-Kiyosue: "Direct interaction of flagellin termini essential for polymorphic ability of flagellar filament" Proc.Natl.Acad.Sci.USA,93. 15108-15113 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Y.Imafuku: "Fluctuation in the microtuble sliding movement driven by kinesin in vitro" Biophys.J.70. 878-886 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] H.Kamikubo: "Structure of the N intermediate of bacteriorhodopsin revealed by x-ray diffraction" Proc.Natl.Acad.Sci.USA,93. 1386-1390 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 若林克三: "X線回折による筋収縮分子機構の研究" 日本結晶学会誌. 38. 208-220 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yagi,N.: "Small-angle X-ray diffraction of muscle using undulator radiation from the Tristan main ring at KEK" J.Synchrotron Rad.3. 305-312 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kikkawa,M.: "Three-dimensional structure of the kinesin head-microtuble complex" Nature. 376. 274-277 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Mimori-Kiyosue,Y.: "Direct interaction of flagellin termini essential for polymorphic ability of flagellar filament" Proc.Nat1.Acad.Sci.USA. 93. 15108-15113 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Imafuku,Y.: "Fluctuation in the microtuble sliding movement driven by kinesin in vitro" Biophys.J.70. 878-886 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kamikubo,H.: "Structure of the N intermediate of bacteriorhodopsin revealed by X-ray diffraction" Proc.Nat1.Acad.Sci.USA. 93. 1386-1390 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 若林克三: "X線溶液散乱法で捉えたエネルギー変換中のミオシン頭部の構造変化" 生物物理. 34. 131-135 (1994)

    • Related Report
      1995 Annual Research Report
  • [Publications] Y.Amemiya: "Large-aperture TV detector with a beryllium-windowed image intensifier for X-ray diffraction" Rev.Sci.Instrum.68(2). 2290-2294 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Y.Sugimoto: "Conformational changes of the myosin heads during hydrolysis of ATP as analyzed by X-ray solution scattering" Biophy.J.58. 29s-34s (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] K.Sekimoto: "Extended time correlation of in vitro motility by motor protein" Phys.Rev.Lett.75. 180-183 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] N.Yagi: "A real-time observation of X-ray diffraction from frog skeletal muscle during and after slow length changes" Japan.J.Physiol.45. 583-606 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] I.Yamashita: "Radial Mass Analysis of the flagellar filament of Salmonella:Implications for the subunit folding" J.Mol.Biol.253. 547-558 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] K.Wakabayashi: "X-ray diffraction evidence for the extensibility of actin and myosin filaments during muscle constraction." Biophys.J.67. 2422-2435 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] E.P.Morris: "Evaluation of high resolution shadowing applied to freeze-fractured,deepetched particles:3D helical reconstruction of shasowed actin-filaments." J.Struct.Biol.113. 47-55 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] T.Ishikawa: "Calcium induced change in three-dimensional structure of thin filaments of rabbit skeletal muscle as revealed by cryo-electoron microscopy." Biochem.Biophys.Res.Commun.203. 951-958 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] M.Kataoka: "Energy coupling in an ion pump:The reprotonation swich of bacteriorhodopsin." J.Mol.Biol.243. 621-638 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] T.Hamanaka: "X-ray diffraction study of the live squid retina." J.Mol.Biol.238. 139-144 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Y.Emoto: "Tension relaxation induced by pulse phtolysis of caged ATP in partially crosslinked fibers from rabbit psoas muscle." Proc.Natl.Acad.Sci.USA. (in press). (1995)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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