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Evolution and horizontal transmission of group I self-splicing introns

Research Project

Project/Area Number 06454037
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field 生物・生体工学
Research InstitutionHIROSHIMA UNIVERSITY

Principal Investigator

YAMADA Takashi  Hiroshima University, Faculty of Engineering : Professor, 工学部, 教授 (40230461)

Co-Investigator(Kenkyū-buntansha) KIKUCHI Yo  Toyohashi University of Technology, Faculty of Engineering : Professor, 工学部, 教授 (40273320)
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 1995: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 1994: ¥3,300,000 (Direct Cost: ¥3,300,000)
Keywordsribozyme / group I intron / self-splicing / Chlorella / Chlorella virus / 水平移動
Research Abstract

Two group I self-splicing introns were found and characterized in the rRNA genes of the unicellular green alga Chlorella ellipsoidea. The primary sequence and secondary structure of of these introns are very similar to those of group IB introns so far found in various organisms belonging to different phylogenetic kingdoms ; for example, the homology between the Chlorella small subunit rRNA intron [Ce (SSU) ] and that of the pathogenic yeast Pneumocystis carinii [Pc (SSU) ] is higher than 80% and the Chlorella large subunit rRNA intron [Ce (LSU) ] showed a homology higher than 80% to the Tetrahymena intron [Tt (LSU) ]. When the 82 "core" nucleotides of the intron were compared among 19 different organisms including 11 green algae, 1 red alga, 2 yeasts, and 1 protist, it was found that they are highly conserved independent of the phylogenetic relationship of the host organisms. These results strongly suggest that the origins of these introns are the same and they have spread and evolved very recently. Therefore, the mechanism of "horizontal intron transmission" is interesting to know. In this study, we discovered a special kind of viruses that can be considered as a possible candidate for the mediator of intron spreading at least among algae, yeasts, and protists. The viruses that infect unicellular green algal Chlorella cells contained group I self-splicing introns. Molecular comparative analysis of the intron structure revealed a remarkably close relatedness of these viral introns with above mentioned group IB introns. These eukaryotic viral introns offer an opportunity to understand how group I introns reach organisms of different phylogenetic kingdoms.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (23 results)

All Other

All Publications (23 results)

  • [Publications] Yamada,T.: "Horizontal transmission of group-I ribozymes:viruses as a carrier of introns." Nucleic Acid Symp.Ser.34. 119-120 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 山田隆: "ウイルスが運ぶ(7)イントロン:藻類、酵母、原生動物間のグループIイントロンの水平伝播を仲介するクロレラウイルスの発見" 化学と生物. 33. 768-770 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 会見忠則: "クロレラのグループI自己スプライシングイントロン:RNA酵素からタンパク質酵素への進化" 化学と生物. 34(印刷中). (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamada,T.: "Self-splicing group I introns in eukaryotic viruses." Nucleic Acids Res.22. 2532-2537 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Aimi,T.: "A group-I self-splicing intron in the nuclear small subunit rRNA-encoding gene of the green alga,Chlorella ellipsoidea C-87." Gene. 139. 65-71 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Aimi,T.: "Characterization of the nuclear large-subunit rRNA-encoding gene and the group-I self-splicing intron from Chlorella ellipsoidea C-87." Gene. 145. 139-144 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamada,T.: "Self-splicing group I introns in eukaryotic viruses." Nucleic Acid Symp.Ser.31. 199-200 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Aimi,T.: "Group I self-splicing introns in both large and small subunit rRNA genes of Chlorella." Nucleic Acid Symp.Ser.29. 159-160 (1993)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Aimi, T., Yamada, T., and Murooka, Y.: "Group I self-splicing introns in both large and small subunit rRNA genes of Chlorella." Nucleic Acid Symp.Ser.29. 159-160 (1993)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Aimi, T., Yamada, T., and Murooka, Y.: "A group-I self-splicing intron in the nuclear small subunit rRNA-encoding gene of the green alga, Chlorella ellipsoidea C-87." Gene. 139. 65-71 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Aimi, T., Yamada, T., Yamashita, M., and Murooka, Y.: "Characterization of the nuclear large-subunit rRNA-encoding gene and the group-I self-splicing intron from Chlorella ellipsoidea C-87." Gene. 145. 139-144 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamada, T., Tamura, K., Aimi, T., and Songsri, P.: "Self-splicing group I introns in eukaryotic viruses." Nucleic Acids Res.22. 2532-2537 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamada, T., Tamura, K., Aimi, T., and Songsri, P.: "Self-splicing group I introns in eukaryotic viruses." Nucleic Acid Symp.Ser.31. 199-200 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamada, T., Songsri, P., and Tamura, K.: "Horizontal transmission of group-I ribozymes : viruses as a carrier of the introns." Nucleic Acid Symp.Ser.34. 119-120 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamada, T.: "Virus-mediated intron transmission : Discovery of viruses infecting algae, fungi, and protists that contain group I introns." Chemistry and Biology. 33. 768-770 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Aimi, T.and Yamada, T.: "Group I self-solicing introns of Chlorella : Evolutionary course from RNA-enzyme to protein-enzyme." Chemistry and Biology. 34 (in press). (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamada, T.: "Horizontal transmission of group-I ribozymes: viruses as a carrier of introns." Nucleic Acids Symp. Ser.34. 119-120 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 山田 隆: 化学と生物. 33. 768-770 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 会見忠則: "クロレラのグループI自己スプライシングイントロン: RNA酵素からタンパク質酵素への進化" 化学と生物. 34(印刷中). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Takashi Yamada: "Self-splicing group I introns in eukaryotic viruses" Nucleic Acida Res.22. 2532-2537 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Takashi Yamada: "Self-splicing group I introns in eukaryotic viruses" Nucleic Acida Symp.Ser.31. 199-200 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Tadanori Aimi: "A group-I self-splicing intron in the nuclear small subunit rRNA-encoding gene of the green alga Chlorella ellipsoidea C-87" Gene. 139. 65-71 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Tadanori Aimi: "Characterization of the nuclear large subunit rRNA-encoding gene and the group I self-splicing intron from Chlorella ellipsoides C-8" Gene. 145. 139-144 (1994)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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