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Mechanism of protein motor based on molecular structure using protein-engineering and cryo-electron microscopy

Research Project

Project/Area Number 06454663
Research Category

Grant-in-Aid for General Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Biophysics
Research InstitutionUniversity of Tokyo

Principal Investigator

WAKABAYASHI Takeyuki  Univ.of Tokyo, School of Science, Projessor, 大学院・理学系研究科, 教授 (90011717)

Co-Investigator(Kenkyū-buntansha) YASUNAGA Takuo  Univ.of Tokyo, School of Science, Research associate, 大学院・理学系研究科, 助手 (60251394)
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥6,600,000 (Direct Cost: ¥6,600,000)
Fiscal Year 1995: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 1994: ¥5,700,000 (Direct Cost: ¥5,700,000)
KeywordsMuscle / Myosin / Actin / Tubulin / Kinesin / Electron microscopy / X-ray scattering / Site-directed mutagenesis / クライオ電子顕微鏡 / 画像解析 / カルシウム / 筋収縮 / 蛋白質工学
Research Abstract

Our goal is to understand the molecular mechanism of motor proteins on the basis of atomic structure of proteins. We describe our result from this grant below.
(1)We identified the position of myosin N-terminus in actomyosin rigor complexes. (2)We identified the tropomyosin binding site(s) on actin, which affects cooperativity of actin-activated ATPase in regulation of Ca. (3)Methanol traps thin filaments on an off-state. (4)The three-dimensional structure of cross-bridge in contracting muscle was reconstructed by electron tomography. (5)We visualized single myosin molecules in solution by cryo-electron microscopy for the first time. (6)We obtained high resolutional structure of thin filaments on an on-state. (7)We reconstructed three-dimensional structure of myosin containing thick filaments on a relaxd state.(8) We developed a new environment to develop new image analysis techniques. (9)For the first time, we visualized three-dimensional structure of tubulin-kinesin complexes. (10)We detected the structural change of thin filaments, which is induced by the addition of Ca.(11)We observed troponin by two-dimensional crystal of thin filaments. (12)We identified the position of nebulin in native thin filaments by electron cryo-microscopy. (13)We detected fluctuating part of myosin in rigor complexes. (14)We detected the change of actin fluctuation mode by electron cryo-microscopy.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (27 results)

All Other

All Publications (27 results)

  • [Publications] 石川 他: "Calcium induced change in three-dimensional structure of thin filaments of rabbitskeletal muscle as revealed by cryo-electoron microscopy" Biochem.Biophys.Res.Commun.203. 951-958 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 吉川 他: "Three-dimensional structure of tubulin-lcinesin complex" Nature. 376. 274-277 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 孟 他: "Determination of the protein conponents of ratiue thin fira ments isolated from natural actomyosin" J.Biochem.118. 442-427 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 松浦 他: "Methanol traps the troponin-tropomysin-actin complex in an eff-state" J.Biochem. 118. 1293-1296 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 佐伯 他: "Tropomyosin-binding site (s) on the Dictyosterium acticl surface as identified bysite-diroded mutaseusis" Biochemistry. 35. 14465-14472 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 安永 他: "Extensible and object-oriented system Eos supplies a new anviron ment for image analysis" J.Struct.Biol.116. 155-160 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Ishikawa, T.& Wakabayashi T.: "Calcium induced change in three-dimensional structure of thin filaments of rabbit skeletal muscle as revealed by cryo-electron microscopy" Biochem.Biophys.Res.Commun.203. 951-958 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Kikkawa, M., Ishikawa, T., Miyazawa, A., Fujiyoshi, Y., Wakabayashi, T.& Hirokawa, N.: "Direct visualization of the microtubule lattice seam both in vitro and in vivo." J Cell Biol.127. 1965-1971 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Ishikawa, T., & Wakabayashi, T.: "Proposal of Alignment-Independent Classification of Electron Microscopic Images with Helical Symmetry and its Application to Reconstrituted Thin Filaments of Skeletal Muscle" Ultramicroscopy. 57. 91-101 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Kikkawa, M., Ishikawa, T., Miyazawa, A., Fujiyoshi, Y., Wakabayashi, T.& Hirokawa, N.: "Three-dimensional structure of tubulin-kinesin complex" Nature. 376. 274-277 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Meng, Y., Yasuanga, T., & Wakabayashi, T.: "Determination of the protein components of native thin filaments isolated from natural actomyosin : nebulin and alpha-actinin are associated with actin filaments" J.Biochem.118. 422-427 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Matsuura, Y., Yoshimoto, Y., Saeki, K., and Wakabayashi, T.: "Methanol traps the troponin-troppomyosin-actin complex in an off-state" J.Biochem.118. 1293-1296 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Saeki, K., Sutoh, K.& Wakabayashi, T.: "Tropomyosin-binding site(s) on the Dictyosterium Actin surface as identify by site-directed mutagenesis" Biochemistry. 35. 14465-14472 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yasunaga, T., Saeki, K., & Wakabayashi, T.: "Facilitationg effect of ADP and phosphate on the sliding movement of actin filaments on the myosin-coated surface" J.Mus.Res.Cell Motil.Abstract.17. 282 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yasunga, T., & Wakabayashi, T.: "Extensible and object-oriented system Eos supplies a new environment for image analysis of electron micrographs of macromolecules" J.Struct.Biol.116. 155-160 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yamakawa, H., Seog, D.-H., Yoda, K., Yamasaki, M., & Wakabayashi, T.: "Uso1 protein is a dimer with two globular heads and a long coiled-coil tail" J.Struct.Biol.116. 356-365 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Yasunaga, T., Hashiba, S., Ueno, S., & Wakabayashi, T.: ""Visualization of single myosin heads by cryo-electron microscopy and a holographic image econstruction technique(HIRT)"" Structure and function of macromolecular assmbly. 244-252 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Wakabayashi, T., Yasunaga, T., Miki, M., Saeki, K., Sutoh, & Sasaki, H.: "Structure and function of actin filaments revealed by sited-directed mutagenesis of actin and image , , analysis of cryo-electron micrographs" Structure and function of macromolecular assmbly. 244-252 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Matsuura,Y.et al.: "Methanol Traps Troponin-Tropomyosin-Actin Complex in an "Off-State" J.Biochem.018. 1293-1296 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Kikkawa,M.et al.: "Three-dimensional structure of kinesin head-microtubule complex" Nature. 376. 274-277 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Yasunaga,T.& Wakabayashi,T.: "Extensible and Object-oriented System(Eos)Supplies a New Environment for Image Analysis of Electron Micrographs of Macromolecules" J.Struct.Biol.(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Meng,Y.et al.: "Determination of the Protein Components of Native Thin Filaments Isolated from Natural Actomyosin:Nebulin and a-Actinin Are Associated with Actin Filaments" J.Biochem.118. 422-427 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ishikawa,T.& Wakabayashi,T.: "Proposal of Alignment-Independent Classification of Electron Microscopic Images with Helical Symmetry and its Application to Reconstituted Thin Filaments of Skeletal Muscle" Ultramicroscopy. 57. 91-101 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ishikawa,T.& Wakabayashi,T.: "Calcium Induced Change in Three-dimensional Structure of Thin Filaments of Rabbit Skeletal Muscle as Revealed by Cryo-electron Microscopy." Biochem.Biophys.Res.Commun.203. 951-958 (1994)

    • Related Report
      1995 Annual Research Report
  • [Publications] Ishikawa,T.& Wakabayashi,T.: "Proposal of alignment-independent classification of electron microscopic images with helical symmetry and its application to reconstituted thin filaments of skeletal muscle" Ultramicroscopy. 57. 91-101 (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Ishikawa,T.& Wakabayashi,T.: "Calcium Induced Change in Three-dimensional Structure of Thin Filaments of Rabbit Skeletal Muscle as Revealed by Cryo-electron Microscopy" Biochem.Biophys.Res.Commun.203. 951-958 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] Kikkawa,M.,et al.: "Direct Visualization of the Microtubule Lattice Seam both in vitro and in vivo" J.Cell Biol.127. 1965-1971 (1994)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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