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DEVELOPMENT OF NEW NMR TECHNIQUES AND THEIR APPLICATION TO STRUCTURAL ANALYSIS OF NATURAL PRODUCTS

Research Project

Project/Area Number 06556019
Research Category

Grant-in-Aid for Developmental Scientific Research (B)

Allocation TypeSingle-year Grants
Research Field Bioproduction chemistry/Bioorganic chemistry
Research InstitutionINSTITUTE OF MOLECULAR AND CELLULAR BIOSCIENCES,UNIVERSITY OF TOKYO

Principal Investigator

SETO Haruo  Institute of Molecular and Cellular Biosciences, University of Tokyo, Bioactive Natural Products, Professor, 分子細胞生物学研究所, 教授 (10013335)

Co-Investigator(Kenkyū-buntansha) FUJITA Ken-ich  JEOL Co., NMR R&D Department, Analytical Instrument Division, Manager, 分析機器技術本部, 課長
HIGUCHI Keiichiro  JEOL Co., NMR R&D Department Analytical Instrument Division, Genaral Manager, 分析機器技術本部, 室長
FURIHATA Kazuo  Division of Agriculture and Agriculutural Life Science, University of Tokyo, Ass, 農学部, 助手 (20219091)
SHIN-YA Kazuo  Institute of Molecular and Cellular Biosciences, University of Tokyo, Bioactive, 分子細胞生物学研究所, 助手 (20251481)
HAYAKAWA Yoichi  Institute of Molecular and Cellular Biosciences, University of Tokyo, Bioactive, 分子細胞生物学研究所, 助教授 (20208606)
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥14,400,000 (Direct Cost: ¥14,400,000)
Fiscal Year 1995: ¥4,400,000 (Direct Cost: ¥4,400,000)
Fiscal Year 1994: ¥10,000,000 (Direct Cost: ¥10,000,000)
Keywordsdecoupled-HMBC / D-HMBC / MolSkop / TANGO-HMBC / analysis of stereo-structures by computer calculation / プロモインドシン / スタキボシン / プロモチオシン / ゲニンチオシン / セコスリキサイド / コンピュータによる立体構造解析
Research Abstract

In this project, we have investigated the applications of a new NMR technique called decoupled-HMBC (D-HMBC) developed by our group to structural analysis of complicated natural products. In addition, we have carried out analysis of stereo-structures by computer calculations using a newly developed software program (MolSkop) by the JEOL group.
As a result, D-HMBC has turned out to be an excellent method to observe small long-range ^<13>C-^1H couplings, which can not be detected by hitherto available techniques. In addition, we have improved the data processing procedures ; ood NMR spectra with improved signal to noise ratio were obtained when data processing was made by the phase sensitive mode of the t2 axis data and by power mode of the t1 axis data.
Comparison of this new technique (D-HMBC) with the pulse field gradiet (PGF) technique has revealed that PFG is superior to D-HMBC in most cases, but when the signal intensities were considerably affected by J-modulation caused by ^1H-^1H spin couplings, D-HMBC gave better results and so a method of choice in such situation. In this project, we have established experimental conditions for obtaining good D-HMBC spectra. This technique has been implemented to commercially available NMR instruments is now being used by some groups.
We have improved the MolSkop software program and proved that it is a useful method to structural analysis of complicated polycyclic systems.
In addition, we have recently developed a new technique called TANGO-D-HMBC,which is quite useful for detecting ^<13>C-^<13>C couplings separed by two bonds. Such kinds of long-range ^<13>C-^<13>C couplings were hardly observed by other methods. This pulse sequence is quite useful for datailed analysis of the ^<13>C- labeling pattern with microbial products formed by arrangement of the carbon skeleton.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (22 results)

All Other

All Publications (22 results)

  • [Publications] B. -S. Yun, H. Seto et al.: "Promothiocins A and B, novel thiopeptides with a tipA promoter inducing activity produced by Streptomyces sp. SF2741." J.Antibiotics. 47. 510-514 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] B. -S. Yun, H. Seto et al.: "Thiotipin, a novel thiopeptides with a tipA promoter inducing activity produced by Streptomyces sp. DT31." Tetrahedron. 50. 11659-11664 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] K. Furihata and H. Seto: "Decoupled HMBC(D-HMBC), an improved technique of HMBC." Tetrahedron Lett.36. 2817-2820 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] B. -S. Yun, and H. Seto: "Promoinducin a novel thiopeptide produced by Streptomyces sp. SF2741." Biosci. Biotech. Biochem.59. 876-880 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] K. Ogawa, M. Nakamura, H. Seto et al: "Stachybocins, novel andothelin receptor antagonists, produced by Stachybotrys sp. M6222. II. Structure determination of stachybocins A, B and C." J.Antibiotics. 48. 1396-1400 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] B.-S.Yun, T.Hidaka, K.Furihata and H.Seto: "Promothiocins A and B,novel thiopeptides with a tipA promoter inducing activity produced by streptomyces sp. SF2741." J.Antibiot. 47. 510-514 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] B.-S.Yun, T.Hidaka, K.Furihata and H.Seto: "Thiotipin, a novel thiopeptides with a tipA promoter inducing activity produced by streptomyces sp. DT31." Tetrahedron. 50. 11659-11664 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] K.Furihata and H.Seto: "Decoupled HMBC (D-HMBC), an improved technique of HMBC." Tetrahedron Lett.36. 2817-2820 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] B.-S.Yun and H.Seto: "Promoinducin, a novel thiopeptide produced by Streptomyces sp. SF2741." Biosci.Biotech.Biochem.59. 876-880 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] K.Ogawa, M.Nakamura, M.Hayashi, S.Yaginuma, S.Yamamoto, K.Furihata, K.Shin-ya and H.Seto: "Stachybocins, novel endothelin receptor antagonists, produced by Stachybotrys sp.M6222. II.Structure determination of stachybocins A,B and C." J.Antibiot. 48. 1396-1400 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] K. Furihata and H. Seto: "Decoupled HMBC(D-HMBC), an improved technique of HMBC." Tetrahedron Lett.36. 2817-2820 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] B. -S. Yun and H. Seto: "Promoinducin, a novel thiopeptide produced by Streptomyces sp. SF2741." Biosci. Biotech. Biochem.59. 876-880 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] K. Shin-ya, S. Shimizu, H. Seto et al.: "Novel neuronal cell protecting substances, aestivopho enins A and B, produced by Streptomyces purpeofuscus." J. Antibiotics. 48. 1378-1381 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] K. Ogawa, M. Nakamura, H. Seto et al.: "Stachybocins, novel endothelin receptor antagonists, produced by Stachybotrys sp. M6222. II. Structure determination of stachybocins A, B and C." J. Antibiotics. 48. 1396-1400 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 藤田憲一、瀬戸治男: "コンピュータを利用した天然有機化合物の立体構造解析" 化学と生物. 33. 319-328 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 瀬戸治男、降旗一夫: "HMBCを主体とする高感度NMR測定法" 化学と生物. 33. 42-49 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] B.-S.Yun,H.Seto et al.: "Promothiocins A and B,novel thiopeptides with a tipA promoter inducing activity produced by Streptomyces sp.SF2741." J.Antibiotics. 47. 510-514 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] B.-S.Yun,H.Seto et al.: "Microbial metabolites with tipA promoter inducing activity.II.Geninthiocin,a novel thiopeptide produced by Streptomyces sp." J.Antibiotics. 47. 969-975 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] B.-S.Yun,H.Seto et al.: "Thiotipin,a novel thiopeptides with a tipA promoter inducing activity produced by Streptomyces sp.DT31." Tetrahedron. 50. 11659-11664 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] B.-S.Yun,H.Seto et al.: "Thioxamycin and its novel derivative,thioactin,two thiopeptides produced by Streptomyces sp. DP94." J.Antibiotics. 47. 1541-1545 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] K.Furihata and H.Seto: "Decoupled HMBC(D-HMBC),an improved technique of HMBC" Tetrahedron Lett.36(in press). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] Y.-J.Kim,H.Seto: "Stere'ochemical studies of sekothrixide,a 14-membered macrolide with a polyol side chain." J.Antibiotics. 48(in press). (1995)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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