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Detection of plankton by molecular biological method.

Research Project

Project/Area Number 06557034
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section試験
Research Field Legal medicine
Research InstitutionMie University

Principal Investigator

FUKUNAGA Tatsushige  Faculty of Medicine, Mie University, Professor, 医学部, 教授 (70156800)

Co-Investigator(Kenkyū-buntansha) NISHI Katsuji  Shiga University of Medical Science, Faculty of Medicine, Professor, 医学部, 教授 (60073681)
Project Period (FY) 1994 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥7,200,000 (Direct Cost: ¥7,200,000)
Fiscal Year 1996: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1995: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 1994: ¥5,500,000 (Direct Cost: ¥5,500,000)
KeywordsPlankton / Diatom / Drowning / PCR / ribosomal DNA / Lake Biwa / Picoplankton / Legal Medicine / Legal Medicine / Biwa Lake / Pico plankton
Research Abstract

A diagnosis of death by drowning is normally based on findings from the external examination of the body and autopsy together with laboratory investigations. The detection of planktons in organs using the chemical digestion method is routinely performed on cadavers for the diagnosis of drowning. In the present study, we attempted to use the molecular biological method for the diagnosis of drowning by PCR analysis of the 16S ribosomal DNA (rDNA) of picoplanktons, belonging to the Synechococcus genus in cyanobacteria (approximately 1 mum in size).
We designed primers complementary to the variable regions of 16S rDNA of the picoplankton we had sequenced.A comparison was made of the PCR products from the three picoplanktons, five other cyanobacteria, Melosira (diatom), Staurasturum (green alga), bacteria from Lake Bikal, and humans. The picogram order of template DNA from picoplankton was specifically amplified by the primers. When the template of picoplankton was mixed with human lung tissue, at least 10 ng of template DNA was needed to obtain a PCR product. The isolation of the picoplankton from lung tissue increased sensitivity of PCR more than a hundred-fold. The specific PCR products of the picoplankton were obtained from formalin-fixed drowning tissue. Molecular biological diagnosis of drowning was successful using picoplankton 16S rDNA.

Report

(4 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • 1994 Annual Research Report
  • Research Products

    (29 results)

All Other

All Publications (29 results)

  • [Publications] Kane,M. et al.: "Molecular phylogenic relationship between strains of cyanobacterial picoplankton in Lake Biwa, Japan." J. Marine Biotechnology. (印刷中). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kane,M. et al.: "The detection of picoplankton 16S rDNA in cases of drowning." Int. J. Legal Med.108. 323-326 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 兼正晃 他: "ピコプランクトン16SrDNA検出による溺死の診断" DNA多型. 4. 191-194 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 兼正晃 他: "PCR法による琵琶湖の植物プランクトンの識別(第2報)" DNA多型. 3. 257-262 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 前田広人他: "PCR法によるバクテリアプランクトンの識別" DNA多型. 3. 263-267 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] 兼正晃 他: "PCR法による琵琶湖の植物プランクトンの識別" DNA多型. 2. 197-201 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kane, M., et al.: "Molecular phylogenic relationship between strains of cyanobacterial picoplankton in Lake Biwa, Japan." J.Marine Biotechnology. in press. (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kane, M., et al.: "The detection of picoplankton 16S rDNA in cases of drowning." Int.J.Legal Med.108-6. 323-326 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kane, M., et al.: "The diagnosis of drowning by the detection of picoplankton 16S rDNA.[in Japanese]" DNA Polymorphism. 4. 191-194 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kane, M., et al.: "Discrimination of phytoplankton in Lake Biwa by PCR (II). [in Japanese]" DNA Polymorphism. 3. 257-262 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Maeda, H., et al.: "Discrimination of bacterial plankton by PCR.[in Japanese]" DNA Polymorphism. 3. 263-267 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kane M., et al.: "Discrimination of phytoplankton in Lake Biwa by PCR.[in Japanese]" DNA Polymorphism. 2. 197-201 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kane,M.et al.: "Molecular phylogenic relationship between atrains of cyanobacterial picoplankton in Lake Biwa,Japan" J.Marine Biotechnology. (印刷中). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kane,M.et al.: "The detection of picoplankton 16S rDNA in cases of drowning." Int.J.Legal Med.108・6. 323-326 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 兼 正晃 他: "ピコプランクトン16SrDNA検出による溺死の診断." DNA多型. 4. 191-194 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] 兼 正晃 他: "PCR法による琵琶湖の植物プランクトンの識別(第2報)" DNA多型. 3. 257-262 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] 前田 広人 他: "PCR法によるバクテリアプランクトンの識別" DNA多型. 3. 263-267 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] 兼 正晃 他: "PCR法による琵琶湖の植物プランクトンの識別" DNA多型. 2. 197-201 (1994)

    • Related Report
      1996 Annual Research Report
  • [Publications] 兼正晃,前田広人,山田光子,福永龍繁,西克治: "PCR法による琵琶湖の植物プランクトンの識別" DNA多型. 2. 197-201 (1994)

    • Related Report
      1995 Annual Research Report
  • [Publications] 兼正晃,福永龍繁,前田広人,西克治: "PCR法によるプランクトン検査の試み.(要旨)" 日本法医学雑誌. 49. 142- (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 兼正晃,前田広人,福永龍繁,西克治: "PCR法による琵琶湖の植物プランクトンの識別(第2法)." DNA多型. 3. 257-262 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 前田広人,兼正晃,福永龍繁,Grachef. MA,西克治: "PCR法によるバクテリアプランクトンの識別" DNA多型. 3. 263-267 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Kane, M., Fukunaga, T., Maeda, H., Nishi, K.: "Application to molecular biological detection of Picoplankton from drowning body." Proceeding of the 2nd Internet World Congress on Biomedical Science in Mie University. EK0511(CD・ROM). (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Kane, M., Fukunaga, T., Maeda, H., Nishi, K.: "The detection of picoplankton 16SrDNA in cases of drowning" Int. J. Legal Med.(in press). (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] 兼正晃,前田広人,山田光子,福永龍繁,西克治: "PCR法による琵琶湖の植物プランクトンの識別." DNA多型. 2. 197-201 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 前田広人,兼正晃,福永龍繁,Grachef,M.A.,西克治: "PCR法によるバクテリアプランクトンの識別." DNA多型. 3(印刷中). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] 兼正晃,前田広人,福永龍繁,西克治: "PCR法による琵琶湖の植物プランクトンの識別(第2報)" DNA多型. 3(印刷中). (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] 兼正晃,前田広人,福永龍繁,西克治: "PCR法による琵琶湖のピコプランクトンの識別(第2報).(要旨)" 平成6年度日本水産学会秋季大会抄録集. 148 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] 兼正晃,福永龍繁,前田広人,西克治: "PCR法による溺死証明の試み.(要旨),(印刷中)" 日本法医学雑誌. 49. (1995)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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