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MOLECULAR STUDIES ON NUCLEAR GENE (S) INTERACTING RYE CYTOPLASM ORDERING OF YAC CLONES TO IDENTIFY THE GENE (S)

Research Project

Project/Area Number 06660007
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field Breeding science
Research InstitutionOKAYAMA UNIVERSITY

Principal Investigator

MURATA Minoru  OKAYAMA UNIVERSITY,RESEARCH INSTITUTE FOR BIORESOURCES,ASSOCIATE PROFESSOR, 資源生物科学研究所, 助教授 (20166292)

Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1995: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1994: ¥1,300,000 (Direct Cost: ¥1,300,000)
KeywordsDifferential screening / Midget chromosome / Nucleo-cytoplasmic interaction / Secale cereale / Triticum aestivum / YAC clones / cDNA / rbcL
Research Abstract

In the rye cytoplasm substitution line of wheat, (cereale)-Chinese Spring (CS), an extra telocentric chromosomes, which is called "midget" owing to its small size, is always found. Transmission of this midget chromosome is limited to some extent from male side. Seeds lacking the midget chromosome are not germinable because of endosperm abortion. Even if they germinate, the plants are very weak and highly male-sterile. This indicates that the midget chromosome originated from a certain part (S) of rye chromosome and carry an essential gene (S) for rye cytoplasm. In this study, I attempted to isolate YAC clones containing the DNA sequences of the midget chromosomes. Although a large number of the clones were isolated, almost clones were found to be structurally modified. Since this seemed to occur due to the recombination in yeast cells, a mutant strain, YKK115 (rad^-), lacking the ability of recombination was introduced. However, almost no transformed clones were obtained.
Differential screening method was also employed to find rye-type cDNAs in a library constructed from (cereale)-CS.Out of 20,000 screened, 27 positive clones showed stronger signals when hybridized with rye cDNAs than with wheat cDNAs. Sequence analysis revealed that almost clones were derived from the rbcL (RuBisco large subunit) gene in rye cytoplasm. Therefore, there were polymorphisms between wheat and rye DNAs. Others were from the cab (chlorophyll a/b binding protein) genes and rbcS genes, but no RFLP were detected between wheat and rye. Although this differential screening seems to be effective to isolate rye-type cDNAs, the cDNA library should be equalized or normalized before screening to avoid cloning abundant cDNAs such as rbcL.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (7 results)

All Other

All Publications (7 results)

  • [Publications] 田島 茂: "ライムギmidget染色体遺伝子の解析.V. Midget染色体はRNAエディティンに関与するのか?" 育種学雑誌. 44(別1). 31 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] W. J. Raupp: "Classical and Molecular Cytogenetic Analysis" Agricitural Experiment Station, Kansas State Univ., Manhattan, 217 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] MURATA,M.: "MOLECULAR STRUCTURE OF A MIDGET CHROMOSOME FROM RYE." "CLASSICAL AND MOLECULAR CYTO-GENETIC ANALYSIS", EDS.W.J.RAUPP AND B.S.GILL,kANSAS ST.UNIV.96-99 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] TAJIMA,S.: "ANALYSIS OF THE GENES ON RYE MIDGET CHROMOSOMES.V.ANY CORRELATION BETWEEN A MIDGET CHROMOSOME AND RNA EDITING." BREEDING SCIENCE. 44-SUPL.1. 31 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] W.J.Raupp: "Classical and Molecular Cytogenetic Analysis" Agriciltural Experiment Station,Kansas State Univ.,Manhattan, 217 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Murata,M.: "Molecular structure of a midget chromosomes from ryc." Proc.US-Japan Joint Seminar,Mannhattan,Kansas,U.S.A.(In press) (1995)

    • Related Report
      1994 Annual Research Report
  • [Publications] 田島茂: "ライムギmidget染色体遺伝子の解析.V.Midget染色体はRNAエディティングに関与するのか?" 育種学雑誌. 44(別1). 31- (1994)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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