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Molecular functional analysis of gene cluster involved in nitrile metabolism

Research Project

Project/Area Number 06660101
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field 応用微生物学・応用生物化学
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

KOBAYASHI Michihiko  Kyoto Univ., Fac.of Agriculture Lect., 農学部, 講師 (70221976)

Co-Investigator(Kenkyū-buntansha) KATAOKA Michihiko  Kyoto Univ., Faculty of Agriculture Assist., 農学部, 助手 (90252494)
SHIMIZU Sakayu  Kyoto Univ., Faculty of Agriculture Prof., 農学部, 教授 (70093250)
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1995: ¥400,000 (Direct Cost: ¥400,000)
Fiscal Year 1994: ¥1,700,000 (Direct Cost: ¥1,700,000)
KeywordsNitrile hydratase / Promoter / Rhodococcus / Amide / Gene / Sequence / 誘導 / クロトンアミド / 塩基配列 / 転写開始点
Research Abstract

Actinomycete Rhodococcus rhodochrous J1 has two NHases depending on an inducer in the presence of cobalt ions ; when the strain is cultured in the medium containing urea and cyclohexanecarboxamide, high-Mr- (H-) and low-Mr- (L-) NHases are selectively induced, respectively.
H-NHase gene was expressed as an active form in R.rhodochrous ATCC12674 using a Rhodococcus-E.coli host-vector (pK4) system, whereas it was expressed as an insoluble (inactive) form in E.coli. SDS/PAGE of cell-extracts of R.rhodochrous transformant carrying plasmid pHJK19, in which a 6.5-kb sequence covering 4.6-kb upstream region, 1.3-kb H-NHase gene and 0.6-kb downstream region was inserted into pK4, showed that the amount of alpha-and beta-subunits of H-NHase was about 50% of the total soluble protein. Analysis using the host-vector system revealed that the 4.6kb region was required for the expression of H-NHase gene. Sequence analysis clarified that one of OFRs in the region had significantly similarity to AmiC which was the negative regulatory protein involved in the expression of an amidase gene from Pseudomonas aeruginosa. Northern blot analysis showed that the genes for the alpha-and beta-subunits of H-NHase were cotranscribed as a 1.8-kb mRNA.Determination of H-NHase activity and H-NHase mRNA levels indicated that the expression of H-NHase gene was regulated by urea at transcriptional level, but not by cobalt ions.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (16 results)

All Other

All Publications (16 results)

  • [Publications] M. Kobayashi & M. Shimizu: "Versatile nitrilases: Nitrile-hydrolyzing enzymes" FEMS Microbiol. Lett.120. 217-224 (1994)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M. Kobayashi, T. Suzuki, T. Fujita, M. Masuda & S. Shimizu: "Occurrence of enzymes involved in biosynthesis of indole-3-acetic acid from indole-3-acetonitrile in plant-associated bacteria, Agrobacterium and Rhizobium" Proc. Natl. Acad. Sci. USA. 92. 714-718 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 小林達彦、清水 昌: "ニトリル代謝関連酵素" 微生物機能の多様性(別府輝彦編;学会出版センター). 139-157 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 小林達彦、清水 昌: "植物ホルモン・インドール酢酸生合成研究の最前線:インドールアセトニトリル経路" 化学と生物. 33. 479-483 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] 小林達彦、山田秀明: "ニトリルヒドラターゼと化学工業への応用" 現代化学増刊28 新しい酵素研究法(一島英治、小野寺一清編;東京化学同人). 152-165 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Kobayashi & M.Shimizu: "Versatile nitrilases : Nitrile-hydrolyzing enzymes" FEMS Microbiol.Lett.120. 217-224 (1994)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Kobayashi, T.Suzuki, T.Fujita, M.Masuda & S.Shimizu: "Occurrence of enzymes involved in biosynthesis of indole-3-acetic acid from indole-3-acetonitrile in plant-associated bacteria, Agrobacterium and Rhizobium" Proc.Natl.Acad.Sci.USA. 92. 714-718 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Kobayashi, S.Shimizu: "Nitorirutaishakanrenkouso" Biseibutukinounotayousei (T.Beppu : Gakkaishuppan senta). 139-157 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Kobayashi, S.Shimizu: "Shokubutuhorumon・indorusakusanseigouseikenkyu no saizensen : Indoruasetonitorirukeiro" Kagaku to seibutu. 33. 479-483 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Kobayashi, H.Yamada: "Nitoriruhidorataze to kagakukougyohenoouyou" Gendaikagakuzoukan 28 Atarashiikousokenkyuhou (E.Kazushima.K.Onodera ; Toukyokagakudoujin). 152-165 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M. Kobayashi, T. Suzuki, T. Fujita, M. Masuda & S. Shimizu: "Occurrence of enzymes involved in biosynthesis of indole-3-acetic acid from indole-3-acetonitrile in plant-associated bacteria, Agrobacterium and Rhizobium" Proc. Natl. Acad. Sci. USA. 92. 714-718 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 小林達彦、清水 昌: "ニトリル代謝関連酵素" 微生物機能の多様性(別府輝彦編;学会出版センター). 139-157 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 小林達彦、清水 昌: "植物ホルモン・インドール酢酸生合成研究の最前線:インドールアセトニトリル経路" 化学と生物. 33. 479-483 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 小林達彦、山田秀明: "ニトリルヒドラターゼと化学工業への応用" 現代化学増刊28新しい酵素研究法(一島英治、小野寺一清編;東京化学同人). 152-165 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] M.Kobayashi & S.Shimizu: "Versatile nitrilases:Nitrile-hydrolyzing enzymes." FEMS Microbiol.Lett.120. 217-224 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] M.Kobayashi,S.Suzuki,F.Fujita,M.Masuda & S.Shimizu: "Occurrence of enzymes involved in biosynthesis of indole-3-acetic acid from indole-3-acetonitrile in Agrobacterium and Rhizobium." Proc.Natl.Acad.Sci.USA. 92(in press). (1995)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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