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IS THE RAPID-PHASE OF ENZYME CATALYTIC CYCLES ENTROPY-DRIVEN?

Research Project

Project/Area Number 06680656
Research Category

Grant-in-Aid for General Scientific Research (C)

Allocation TypeSingle-year Grants
Research Field Biophysics
Research InstitutionKYUSHU INSTITUTE OF TECHNOLOGY

Principal Investigator

KODAMA Takao  KYUSHU INSTITUTE OF TECHNOLOGY,FACULTY OF COMPUTER SCIENCE AND ENGINEERING,PROFESSOR, 情報工学部, 教授 (30034200)

Co-Investigator(Kenkyū-buntansha) KOMATSU Hideyuki  KYUSHU INSTITUTE OF TECHNOLOGY,FACULTY OF COMPUTER SCIENCE AND ENGINEERING,RESEA, 情報工学部, 助手 (90253567)
OKAMOTO Masahiro  KYUSHU INSTITUTE OF TECHNOLOGY,FACULTY OF COMPUTER SCIENCE AND ENGINEERING,ASSOC, 情報工学部, 助教授 (40211122)
Project Period (FY) 1994 – 1995
Project Status Completed (Fiscal Year 1995)
Budget Amount *help
¥2,100,000 (Direct Cost: ¥2,100,000)
Fiscal Year 1995: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 1994: ¥1,300,000 (Direct Cost: ¥1,300,000)
Keywordsthermocouple-array / stopped-flow calorimeter / chymotrypsin / simulation / intermediate steps / acylation / deacylation / peptide substrate / 酵素反応サイクル / 熱力学的駆動力 / エントロピー / エンタルピー
Research Abstract

Measurements were made of heat production accompanying hydrolysis of N-benzoyl-L-tyrosine ethyl ester (BYE) catalyzed by alpha-chymotrypsin (CT). The instrument used was essentially a stopped-flow device with a thermocouple-array as the reaction detector that can measure temperature changes < 1 mK with a response time < 5 ms [Kodama, T.& Kometani, K.(1990) Thermochim. Acta 163,105-110]. The dead time of the instrument was 13 ms. The heat records were obtained in 100 mM KCl containing 11% (v/v) acetonitril as cosolvent and analyzed by a curve-fitting procedure based on steady-state kinetic parameters estimated in separate experiments under comparable conditions (the equilibrium constant for BYE binding to CT,rate constants for acylation of CT with concomitant release of ethanol and deacylation of CT) [Berezin, I.V., Kazanskaya, N.F., & Klyosov, A.A.(1971) 15,121-124]. The enthalpy changes for these intermediate steps were taken as adjustable parmeters and their best fit values indicate that BYE binding to CT is strongly endothermic, followed by strongly exothermic CT acylation. The rate-limiting deacylation is endothermic, which makes the overall reaction almost thermally neutral.

Report

(3 results)
  • 1995 Annual Research Report   Final Research Report Summary
  • 1994 Annual Research Report
  • Research Products

    (5 results)

All Other

All Publications (5 results)

  • [Publications] Harada,K.,Yoshida,S.,Ohtsubo,K.,Komatsu,H.,and Kodama,T.: "Stopped-flow calorimetry of an a-chymotrypsin reaction" Biochemistry. to be submitted.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] Harada, K., Yoshida, S., Ohtsubo, K., Komatsu, H., and Kodama, T.: "Stopped-flow calorimetry of an alpha-chymotrypsin reaction" Biochemistry. to be submitted.

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1995 Final Research Report Summary
  • [Publications] M.Suzuki,J.Shigematsu & T.Kodama: "A hydration study of proteins in solution by Microwave dielectlic analysis" J.Phys.Chem.(in press).

    • Related Report
      1995 Annual Research Report
  • [Publications] Y.Morita & M.Okamoto: "Development of Biosimulator for Analyzing Nonlinear Reaction Network" Proceeding of the 5th.Intl.Symp.of Process System Engng.1. 641-647 (1994)

    • Related Report
      1994 Annual Research Report
  • [Publications] H.Komatsu & K.Tawada: "Trinitrophenylation of the Reactive Lysine Residue in Double-Headed Myosin in the Presence of PPi" J.Biochem.115. 1190-1196 (1994)

    • Related Report
      1994 Annual Research Report

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Published: 1994-04-01   Modified: 2016-04-21  

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