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Genes of Chromosome Partition and the FtsH Protein

Research Project

Project/Area Number 07044205
Research Category

Grant-in-Aid for international Scientific Research

Allocation TypeSingle-year Grants
SectionJoint Research
Research InstitutionKUMAMOTO UNIVERSITY

Principal Investigator

HIRAGA Sota  Kumamoto University, School of Medicine, Professor, 医学部, 教授 (40027321)

Co-Investigator(Kenkyū-buntansha) CUTTING Simo  ロンドン大学, 講師
SCHUMANN Wol  バイロイト大学, 教授
RUTMAN Andre  ヘブライ大学, 助手
AMOS Oppenhe  ヘブライ大学, 教授
BUKAU Bernd  ハイデルベルグ大学, 助教授
JAFFE Aline  パリ第7大学, ジャクモノ研究所, 助教授
YAMAZOE Mitsuyoshi  Kumamoto University, School of Medicine, Instructor, 医学部, 助手 (00284745)
NIKI Hironori  Kumamoto University, School of Medicine, Lecturer, 医学部, 講師 (70208122)
OGURA Teru  Kumamoto University, School of Medicine, Associate Professor, 医学部, 助教授 (00158825)
SIMON Cutting  University of London, Lecturer
WOLFGANG Schumann  University of Bayreuth, Professor
ANDREW Joel Rutman  The Hebrew University, Instructor
OPPENHEIM Amos B  The Hebrew University, Professor
BERND Bukau  University of Heidelberg, Associate Professor
ALINE Jaffe  University Paris VII,Associate Professor
SIMON Cuttin  ロンドン大学, 講師
WOLFGANG Sch  バイロイト大学, 教授
ANDREW JOEL  ヘブライ大学, 助手
OPPENHEIM Am  ヘブライ大学, 教授
BERND Bukau  ハイデルベルグ大学, 助教授
ALINE Jaffe  パリ第7大学, ジャクモノ研究所, 助教授
山中 邦俊  熊本大学, 医学部, 助手 (90212290)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥5,800,000 (Direct Cost: ¥5,800,000)
Fiscal Year 1996: ¥2,800,000 (Direct Cost: ¥2,800,000)
Fiscal Year 1995: ¥3,000,000 (Direct Cost: ¥3,000,000)
Keywordschromosome partitioning / MACS / Muk protein / immunofluorescence method / FtsH / ATPase / protease / sigma^<32> / ATPasc / MukB / 膜蛋白 / σ因子
Research Abstract

We have studied genes essential for chromosome partition, mukF,mukE,and mukB genes, in Escherichia coli. These muk genes constitute an operon. Tagged Muk proteins were purified to study their biochemical activities. Co-immunoprecipitaion experiments indicated that MukB,MukE,and MukF interact each other. Interaction between MukB and MukF was further confirmed by the analysis with the yeast two-hybrid system. We have developed a novel immunofluorescent microscopy to analyze protein distribution in the cell. Using the method, we have found that MukE proteins are localized as filaments, along the long axis, at one side of the cell periphery. EF-Tu, a cytoplasmic protein, TolC and Lpp, outer membrane proteins, were also showed to be localized as similar as MukE.These results indicate that a particular set of proteins forms together filaments. We named this structure "Membrtane-associated cytoskelton-like structure (MACS)". Structure of MACS is variable during cell cycle. We speculate that M … More ACS acts as rails on which MukB motor drives to carry chromosomal DNA.
We have also studied FtsH protease which degrades s32. A synthetic peptide corresponding to the C region of s32, which is essential for rapid degradation in vivo, was examined for in vitro degradation by FtsH,and it was found that the peptide was indeed cleaved by FtsH in an ATP-dependent fashion. We have introduced mutations in the Walker motif, the SRH region, and zinc-biding catalytic motif of FtsH by site-directed mutagenesis. The proteolytic activity of FtsH was greatly affected by these mutations. We have identified an suppressor mutation, sfhC,which allows DftsH cells to grow. Genetic analysis revealed that sfhC is allelic to fabZ whose product acts in phospholipid biosynthesis. In addition, ftsH mutations caused increase in the amount of lipopolysaccharide with overproduction of a key enzyme in lipopolysaccharide biosynthesis, EnvA,that resulted in formation of abnormal membrane structure in the periplasm. FtsH controls biosynthesis of these membrane components. We have also studied involvement of FtsH in sporulation in Bacillus subtilis. Less

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (52 results)

All Other

All Publications (52 results)

  • [Publications] Calb,R.: "Structure and function of the Pseudomonas putida integration host factor." J.Bacteriol.178. 6319-6326 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Goldenberg,D.: "Differential mRNA stability of the cspA gene in the cold-shock response of Escherichia coli." Mol.Microbiol.19. 241-248 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Giladi,H.: "Identification of an UP element within the IHF binding site at the PL1-PL2 tandem promoter of bacteriophagelambda." J.Mol.Biol.260. 484-491 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Theyssen,H.: "The second step of ATP binding to DnaK induces peptide release." J.Mol.Biol.263. 657-670 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Gamer,J.: "A cycle of binding and release of the DnaK,DnaJ and GrpE chaperones regulates activity of the Escherichia coli heat shock transcription factor σ^<32>." EMBO J.15. 607-617 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] McCarty,J.S.: "Regulatory region C of the E.coli heat shock transcription factor,σ^<32>,constitutes a DnaK binding site and is conserved among eubacteria." J.Mol.Biol.256. 829-837 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Hecker,M.: "Heat-shock and general stress response in Bacillus subtilis." Mol.Microbiol.19. 417-428 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Herbort,M.: "Cloning and sequencing of the dnaK operon of Bacillus stearothermophilus." Gene.170. 81-84 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Schulz,A.: "hrcA,the first gene of the Bacillus subtilis dnaK operon encodes a negative regulator of class I heat shock genes." J.Bacteriol.178. 1088-1093 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Bagyan,I.: "A compartmentalized regulator of developmental gene expression in Bacillus subtilis." J.Bacteriol.178. 4500-4507 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Gomez,M.: "Expression of the Bacillus subtilis spoIVB gene is under dual sigmaF/sigmaG control." Microbiology. 142. 3453-3457 (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Lysenko,E.: "Characterization of the ftsH gene of Bacillus subtilis." Microbiology. (in press). (1997)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yamanaka,K.: "Characterization of the smtA gene encoding an S-adenosylmethionine-dependent methyltransferase of Escherichia coli." FEMS Microbiol.Lett.133. 59-63 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Imamura,R.: "Identification of the cpdA gene encoding cyclic 3',5'-adenosine monophosphate phosphodiesterase in Escherichia coli." J.Biol.Chem.271. 25423-25429 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kido,M.: "RNase E polypeptides lacking a carboxyl-terminal half suppress a mukB mutation in Escherichia coli." J.Bacteriol.178. 3917-3925 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Saleh,A.Z.M.: "Carboxyl terminal region of the MukB protein in Escherichia coli is essential for DNA binding activity." FEMS Microbiol.Lett.143. 211-216 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yamanaka,K.: "Identification of two new genes,mukE and mukF,involved in chromosome partitioning in Escherichia coli." Mol.Gen.Genet.259. 241-251 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Calb, R.: "Structure and function of the Pseudomonas putida integration host factor" J.Bacteriol.178. 6319-6326 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Goldenberg, D.: "Differential mRNA stability of the cspA gene in the cold-shock response of Escherichia coli." Mol.Microbiol.19. 241-248 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Giladi, H.: "Identification of an UP element within the IHF binding site at the PL1-PL2 tandem promoter of bacteriophage lambda." J.Mol.Biol.260. 484-491 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Theyssen, H.: "The second step of ATP binding to DnaK induces peptide release." J.Mol.Biol.263. 657-670 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Gamer, J.: "A cycle of binding and release of the DnaK,DnaJ and GrpE chaperones regulates activity of the Escherichia coli heat shock transcription factor sigma^<32>" EMBOJ.15. 607-617 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] McCarty, J.S.: "Regulatory region C of the E.coli heat shock transcription factor sigma^<32>, constitutes a DnaK binding site and is conserved among eubacteria." J.Mol.Biol.256. 829-837 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Hecker, M.: "Heat-shock and general stress response in Bacillus subtilis." Mol.Microbiol.19. 417-428 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Herbort, M.: "Cloning and sequencing of the dnaK operon of Bacillus stearothermophilus." Gene.170. 81-84 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Schulz, A.: "hrcA,the first gene of the Bacillus subtilis dnaK operon encodes a negative regulator of class I heat shock genes." J.Bacteriol.178. 1088-1093 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Bagyan, I.: "A compartmentalized regulator of developmental gene expression in Bacillus subtilis" J.Bacteriol.178. 4500-4507 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Gomez, M.: "Expression of the Bacillus subtilis spoIVB gene is under dual sigmaF/sigmaG control." Microbiology. 142. 3453-3457 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Lysenko, E.: "Characterization of the ftsH gene of Bacillus subtilis." Microbiology. (in press). (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yamanaka, K.: "Characterization of the smtA gene encoding an S-adenosylmethionine-dependent methyltransferase of Escherichia coli." FEMS Microbiol.Lett.133. 59-63 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Imamura, R.: "Identification of the cpdA gene encoding 3', 5'-adenosine monophosphate phosphodiesterase in Escherichia coli." J.Biol.Chem.271. 25423-25429 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Kido, M.: "RNase E polypeptides lacking a carboxyl-terminal half suppress a mukB mutation in Escherichia coli." J.Bacteriol.178. 3917-3925 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Saleh, A.Z.M.: "Carboxyl terminal region of the MukB protein in Escherichia coli is essential for DNA binding activity." FEMS Microbiol.Lett.143. 211-216 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Yamanaka, K.: "Identificaion of two new genes, mukE and mukF,involved in chromosome partitioning in Escherichia coli." Mol.Gen.Genet.259. 241-251 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Calb, R.: "Structure and function of the Pseudomonas putida integration host factor." J. Bacteriol.178. 6319-6326 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Goldenberg, D.: "Differential mRNA stability of the cspA gene in the cold-shock response of Escherichia coli." Mol. Microbiol.19. 241-248 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Giladi, H.: "Identification of an UP element within the IHF binding site at the PL1-PL2 tandem promoter of bacteriophage lambda." J. Mol. Biol.260. 484-491 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Theyssen, H.: "The second step of ATP binding to DnaK induces peptide release." J. Mol. Biol.263. 657-670 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Gamer, J.: "A cycle of binding and release of the DnaK, DnaJ and GrpE chaperones regulates activity of the Escherichia coli heat shock transcription factor σ^<32>." EMBO J.15. 607-617 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] McCarty, J. S.: "Regulatory region C of the E. coli heat shock transcription factor, σ^<32>, constitutes a DnaK binding site and is conserved among eubacteria." J. Mol. Biol,. 256. 829-837 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Hecker, M.: "Heat-shock and general stress response in Bacillus subtilis." Mol. Microbiol.19. 417-428 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Herbort, M.: "Cloning and sequencing of the dnaK operon of Bacillus stearothermophilus." Gene.170. 81-84 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Schulz, A.: "hrcA, the first gene of the Bacillus subtilis dnaK operon encodes a negative regulator of class I heat shock genes." J. Bacteriol.178. 1088-1093 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Bagyan, I.: "A compartmentalized regulator of developmental gene expression in Bacillus subtilis." J. Bacteriol.178. 4500-4507 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Gomez, M.: "Expression of the Bacillus subtilis spoIVB gene is under dual sigmaF/sigmaG control." Microbiology. 142. 3453-3457 (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Lysenko, E.: "Characterization of the ftsH gene of Bacillus subtilis." Microbiology. (in press). (1997)

    • Related Report
      1996 Annual Research Report
  • [Publications] Imamura, R.: "Identification of the cpdA gene encoding cyclic 3′,5′-adenosine monophosphate phosphodiesterase in Escherichia coli." J. Biol. Chem.271. 25423-25429 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Kido, M.: "RNase E polypeptides lacking a carboxylterminal half suppress a mukB mutation in Escherichia coli." J. Bacteriol.178. 3917-3925 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Saleh, A. Z. M.: "Carboxyl terminal region of the MukB protein Escherichia coli is essential for DNA binding activity." FEMS Microbiol. Lett.143. 211-216 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yamanaka, K.: "Identification of two new genes, mukE and mukF, involved in chromosome partitioning in Escherichia coli." Mol. Gen. Genet.259. 241-251 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Yamanaka,K.: "Characterization of the smtA gene encoding an S-adenosylmethionine-dependent methyltransferase of Escherichia coli" FEMS Microbiol.Lett.133. 59-63 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Tomoyasu,T.: "Escherichia coli FtsH is a membrane-bound,ATP-dependent protease which derades the heat-shock transcription factor σ32." EMBO J.14. 2551-2560 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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