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Elucidation of the organization mechanism of dynamic higher-ordered structures in biological cells

Research Project

Project/Area Number 07308050
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section総合
Research Field Biophysics
Research InstitutionNagoya University

Principal Investigator

KOUYAMA Tsutomu  Nagoya University, Professor, 大学院理学研究科, 教授 (30170210)

Co-Investigator(Kenkyū-buntansha) KASAI Michio  Osaka University, 基礎工学部, 教授 (40022595)
OOKI Kazuo  Tohoku University, Professor, 大学院理学研究科, 教授 (80115394)
SAKO Yasushi  University of Tokyo, Assistant Professor, 教養学部, 助手 (20215700)
MIYAMOTO Shigeaki  Kyushu Institute of Technology, Professor, 情報工学部, 教授 (40219811)
ARISAKA Fumio  Tokyo Institute of Technology, Associate Professor, 生命理工学部, 助教授 (80133768)
石渡 信一  早稲田大学, 理工学部, 教授 (10130866)
神谷 律  東京大学, 理学研究科, 教授 (10124314)
豊島 近  東京大学, 分子細胞生物研究所, 教授 (70172210)
中西 守  名古屋市立大学, 薬学部, 教授 (90090472)
Project Period (FY) 1995 – 1996
Project Status Completed (Fiscal Year 1996)
Budget Amount *help
¥9,400,000 (Direct Cost: ¥9,400,000)
Fiscal Year 1996: ¥4,300,000 (Direct Cost: ¥4,300,000)
Fiscal Year 1995: ¥5,100,000 (Direct Cost: ¥5,100,000)
Keywordscell organelle / intracellular membranes / non-membrane higher ordered structure / biological supramolecules / intracellular traffic of lipids / artificial lipid membranes / spherical assembly / tubular assembly / 生体膜 / 膜蛋白質 / 膜小胞 / 細胞運動 / 蛋白質集合体 / 蛋白質の自己集合
Research Abstract

The title of this project is elucidation of the organization mechanism of dynamic higher-order structures in biological cells. Here the term "dynamic higher-ordered structures" means mainly membrane-bounded organella in eucaryotic cells, and "elucidation of the organization mechanism" means to understand it so deeply as to reconstitute the organella under artificial conditions. Since dynamic behaviors of intracellular membranous systems can be understood by taking account of their interactions with non-membranous higher-ordered structures, many types of research subject are included in this project. Besides intracellular membrane systems (plasma membrane, nuclear membranes, the inner membrane of mitochondria, the thylakoid membrane of chloroplasts, the sarcoplasmic reticulum of muscle cells, the disk membrane of photoreceptor rod cells, the synaptic vesicle of neurons), non-membrane higher-ordered structures (the cytoskelton, eucaryotic flagella, muscle filaments), special higher-ordered structures (virus, the bacterial flagella motor, the purple membrane of holobacteria) and artificial lipid membranes were studied. We held annual meetings, in which each member of the project was asked to report his research output as well as current topics in a related research field. So many discoveries were presented, and the audience were satisfied to hear what was going on in other fields. Trials to reconstitute some specific higher-ordered structures were reported, but a large fraction of the reports concerned elucidation of biological phenomena at the molecular level. It is pointed out that relevant physicochemical methods for analyzing complicatedly-coupled behaviors of intracellular higher-ordered structures should be developed before achieving fruitful discussion about biological phenomena at the cellular level. We hope that the challenge to reconstitute intracellular higher-ordered structures will lead to production of more important discoveries in future.

Report

(3 results)
  • 1996 Annual Research Report   Final Research Report Summary
  • 1995 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] N.D.Denkov: "Nanoparticle arrays in freely suspended vitrified films" Phys. Rev. Lett.76. 2354-2357 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] C.Torigoe: "Quantitative and realtime correlation between receptor aggregation and intracelular calcium signal transduction" Immunol. Lett.49. 169-174 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Ikeda: "Self-assembly of capping protein, FliD, of bacterial flagella into an anuular structure" J. Mol. Biol.259. 679-686 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Nishizawa: "Unbinding force of a single motor molecule of muscle measured using optical tweezers" Nature. 377. 251-254 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Kosukegawa: "Purification and characterization of virus-like particles and pentamers produced by expression of SV40 capsid proteins in insect" Biochim. Biophys. Acta. 1290. 37-45 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] K.Akashi: "Preparation of giant liposome in physiological conditions and their characterization under an optical microscope" Biophys. J.71. 3242-3250 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] H.Takahashi: "Structural and themotropic properties of calcium-dimyristoylphosphatidic acid complexes at acidic and neutral pH conditions" Biophys. J.69. 1464-1472 (1995)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Y.Sugase: "Cloning and characterization of the actin-encoding gene of chlaydomonas reinhardtii" Gene. 168. 117-121 (1996)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] N.D Denkov, H.Yoshimura, K.Nagayama, and T.Kouyama: "Nanoparticle arrays in freely suspended vitrified films." Phys.Rev.Lett.76. 2354-2357 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] C.Torigoe and M.Nakanishi: "Quantitative and realtime correlation between receptor receptor aggregation and intracellular calcium signal transduction." Immunol.Lett.49. 169-174 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Ikeda, K.Oosawa, H.Hotani: "Self-assembly of capping protein, FilD,of bacterial flagella into an anuular structure." J.Mol.Biol.259. 679-686 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Nishizaka, H.Miyata, H.Yoshikawa, S.Ishiwata, K.Kinosita: "Unbinding force of a single motor molecule of muscle measured using optical tweezers." Nature. 377. 251-254 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] A.Kosukegawa, F.Arisaka, M.Tkayama, H.Yajima, H.Kaidow and H.Hnada: "Purification and characterization of virus-like particles and pentamer produced by expression of SV40 capsid proteins in insect" Biochim.Biophys.Acta.1290. 37-45 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] K.Akashi, H.Miyata, and K.Kinosita: "Preparation of giant liposome in physiological conditions and their characterization under an optical microscope" Biophys.J.71. 3242-3250 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] H.Takahashi, T.Yasue, K.Ohki and I.Hatta: "Structural and thermotropic properties of calcium-dimyristoylphosphatidic acid complexes at acidic and neutral pH conditions" Biophys.J.69. 1464-1472 (1995)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] T.Sugase, M.Hirono, K.L.Kindle, and R.Kamiya: "Cloning and characterization of the actin-encoding gene of chlamydomonas reinhardtii." Gene. 168. 117-121 (1996)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] K.Shinzawa-Itoh, H.Ueda, S.Yosikawa, H.Aoyama, E.Yamashita and T.Tsukihara: "Structures of metal sities of oxidized bovine heart cytochrome c oxidase at 2.8*" Science. 269. 1069-1074

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] Y.Sako, A.Sekihata, Y.Yanagisawa, M.Yamamoto, Y.Shimada K.Ozaki and A.Kusumi: "Comparison of two-photon excitation laser scanning microscopy with UV-confocal laser microscopy in 3-dimensional calcium imaging using the fluoresscence indicator Indo-1." J.Microscopy. 185. 9-20 (1997)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      1996 Final Research Report Summary
  • [Publications] N.D.Denkov: "Nanoparticle arrays in freely suspended vitrified films" Phys.Rev.Lett.76. 2354-2357 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] C.Torigoe: "Quantitative and realtime correlation between receptor aggregation and intracellular calcium signal transduction" Immunol.Lett.49. 169-174 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] T.Ikeda: "Self-assembly of capping protein,FliD,of bacterial flagella into an anuular structure" J.Mol.Biol.259. 679-686 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] T.Nishizawa: "Unbinding force of a single motor molecule of muscle measured using optical tweezers" Nature. 377. 251-254 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] A.Kosukegawa: "Purification an characterization of virus-like particles and pentamers produced by expression of SV40 capsid proteins in insect" Biochim.Biophys.Acta. 1290. 37-45 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] K.Akashi: "Preparation of giant liposome in physiological conditions and their characterization under an optical microscope" Biophys.J.71. 3242-3250 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] H.Takahashi: "Structural and themotropic properties of calcium-dimyristoylphosphatidic acid complexes at acidic and neutral pH conditions" Biophys.J.69. 1464-1472 (1995)

    • Related Report
      1996 Annual Research Report
  • [Publications] Y.Sugase: "Cloning and characterization of the actin-encoding gene of chlaydomonas reinhardtii" Gene. 168. 117-121 (1996)

    • Related Report
      1996 Annual Research Report
  • [Publications] Tsukihara,T.他: "Structure of metal sites of oxidized bovine heart cytochrome c oxidase at 2.8 Å." Science. 269. 1069-21074 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Nishizaka,T.他: "Unbinding force of a single moter molecle of muscle measured using optical tweezers.21GC02:Nature" 377. 251-254 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Katayama,E.他: "Geometry of the flagellar motor in the cytoplasmic membrane of Salmonella typhimurium as determined by stereo-photogrammetry of quick-freeze deep-etch replica images." J.Mol.Biol. 255. 458-475 (1996)

    • Related Report
      1995 Annual Research Report
  • [Publications] Sako,Y.他: "Barriers for lateral diffusion of transferrin receptor in the plasma membrane as characterized by receptor dragging by laser tweezers : fence versus tether" J.Cell Biol.129. 1559-1574 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Mimori,Y 他: "The structure of the R-type Straight Flagellar Filament of Salmonella at 9 Å Resolution by Electoron Cryomicroscopy." J.Mol.Biol.249. 69-87 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Miyao,M .他: "Specific degradation of the D1 protein of photosystem II by treatment with hydrogen peroxide in darkness ; Implications for the mechanism of degradation of the D1 protein under illumination." Biochemistry. 34. 10019-10026 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] Okamato,Y.他: "Confocal fluorescence microscopy for studying thapsigargin-induced divalent cation entry into B cells." Biochem.J.305. 1011-1015 (1995)

    • Related Report
      1995 Annual Research Report
  • [Publications] 葛西道生,他: "生物物理から見た生命像2、生体膜-生命の基本形を形づくるもの" 吉岡書店, 167 (1995)

    • Related Report
      1995 Annual Research Report

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Published: 1995-04-01   Modified: 2016-04-21  

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